Methanococcus maripaludis X1: GYY_05995
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Entry
GYY_05995 CDS
T01584
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
mmd
Methanococcus maripaludis X1
Pathway
mmd03030
DNA replication
mmd03420
Nucleotide excision repair
mmd03430
Mismatch repair
mmd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GYY_05995
03420 Nucleotide excision repair
GYY_05995
03430 Mismatch repair
GYY_05995
03440 Homologous recombination
GYY_05995
03460 Fanconi anemia pathway
GYY_05995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmd03000
]
GYY_05995
03032 DNA replication proteins [BR:
mmd03032
]
GYY_05995
03400 DNA repair and recombination proteins [BR:
mmd03400
]
GYY_05995
Transcription factors [BR:
mmd03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
GYY_05995
DNA replication proteins [BR:
mmd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
GYY_05995
DNA repair and recombination proteins [BR:
mmd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
GYY_05995
MMR (mismatch excision repair)
GYY_05995
DSBR (double strand breaks repair)
HR (homologous recombination)
GYY_05995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
OB_Ssb-like
Rep_fac-A_C
DUF3127
OB_POT1A
OB_MEIOB_N
DZR_2
Zn_Ribbon_TF
FYVE
DUF2536
Motif
Other DBs
NCBI-ProteinID:
AEK20064
UniProt:
G0H0I3
LinkDB
All DBs
Position
complement(1117575..1119503)
Genome browser
AA seq
642 aa
AA seq
DB search
MNIDKLKQKILSKISEKELEKKVNEKIEENSGLLGEESAVMLVAQELGIEITYGDDEEEY
DFSIKDIADGQKNVEVTGKIIEISPAKDFNRKDGSTGKLASVTIGDNTGITRLTFWNDKT
DLIEGLKKGDVVKIENAFSRKWNDKVELNSGSELSIEKLKKYDESRYPILKDNYKISELM
PNLSGTINAEVVTAYPKKEFSRKDGTKGQLKSLFLKDDTGSIRGTLWNELADFEVKKGDI
AEVSGYVKQGYSGLEISVDNIGIIEESVKEEKPVEKLSISELTSFDGEYVTVSGNIVNIS
GSREVQFSDRTAEVQDIYINDGTGMVKTAFWGTNRSILDGLKEGDYVTISNAKLRTYTDN
TGEKRADLTYNYMSELKKDESASKKILEEITEIKDILNGSAENSDVTVVAMVTNAYPVNE
FQRSSGGTGKVRNIMLEDGTGSIRMALWDSDAETEISEGDVVKLIHGYAKESGEYMDLST
GRFGRIEVNPKGVSIKSPRNYIADLEEGVSTEISGTIVDYRKQDVILNLCPNCRKRLNLV
DNKYLCEVCGEVEPNELLVSNLTVDDGTGVINCRVYGNNVEKVTELSKNKLKEMNMDALA
DVLGKDVLFYGTPSFRNDDLEFAVKRVNFVDVSKELEVLKQL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgacaagttaaaacaaaaaatattatcaaaaatctcagaaaaagagcttgag
aaaaaagtaaatgaaaaaatcgaggaaaattccgggcttcttggcgaagaaagtgcagta
atgctggttgcacaggaactcgggatagaaataacttacggcgacgatgaagaagaatat
gatttttcgattaaagatatcgctgacgggcagaaaaatgttgaagtcacaggaaaaatt
attgaaatttcgcctgcaaaagactttaaccgaaaagatggaagcactggaaaacttgca
tcagttactatcggggacaatactggaattactagacttacgttttggaacgacaaaacg
gatcttattgaaggattaaaaaaaggcgacgttgtaaaaattgaaaatgcattcagcaga
aaatggaatgataaggttgaattaaacagcggttcagaattatcaattgaaaaacttaaa
aaatacgatgaatcgagatatcctattttaaaagataattataagatttcagaattaatg
ccgaatttatctggaacaatcaatgcagaagttgttacagcataccctaaaaaagaattc
agcagaaaagatggaacaaaaggtcagctaaaatctttatttttaaaagatgatactgga
agtataaggggaactctctggaatgaacttgcagattttgaagttaaaaaaggagatatt
gcagaagtaagcggttatgtaaaacagggttattcaggacttgaaatttctgttgataat
attggaataattgaagaatcagttaaagaagaaaaacctgttgaaaaattgagtatttct
gaacttacaagctttgatggggaatacgttacagtttctggaaatattgttaacatttct
ggttcaagagaagtccaatttagcgatagaactgcagaagttcaggatatttacataaac
gatggaactggaatggtaaaaactgcattctggggtacaaacaggagtattcttgacggc
ttaaaagaaggagattacgtaacaatctcaaatgctaaattaagaacctacactgataat
actggtgaaaaaagggccgatttaacttataactacatgtcagaacttaaaaaagacgaa
agtgcaagtaaaaaaatattagaagaaataaccgaaattaaagatattttaaatggaagt
gcagaaaactccgatgtaacagttgttgcaatggttacaaatgcatatccggtaaatgag
ttccaaagaagcagtggtggaactggaaaagttagaaatattatgttagaagatggaact
ggaagcataagaatggctttatgggatagtgacgcagaaaccgaaatttccgaaggagac
gttgtaaagctaatacacgggtatgctaaagaaagtggagaatacatggatttatcaaca
ggacggtttggaagaattgaagtaaatccaaaaggagtttcaataaaatctccaagaaat
tatatcgcagaccttgaagaaggagtttcaaccgaaattagcggaactattgtagactac
agaaaacaagacgtaattcttaacttatgtccaaactgtaggaaaagattgaatttagtt
gataataaatacctgtgcgaagtttgtggagaagttgaaccaaacgagcttttagtttca
aatttaacagttgatgatggtacaggcgttattaactgtagggtatatggaaacaatgtt
gaaaaagtaactgaactttcaaaaaataaattaaaagaaatgaatatggatgcacttgca
gatgtgcttggaaaagatgttttattctatggaaccccttcatttagaaatgatgactta
gaatttgcagtaaaacgggttaatttcgtagatgtatcaaaagaattggaagttttaaag
caactttaa
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