Methanococcus maripaludis X1: GYY_07530
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Entry
GYY_07530 CDS
T01584
Name
(GenBank) SMC domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mmd
Methanococcus maripaludis X1
Brite
KEGG Orthology (KO) [BR:
mmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmd03400
]
GYY_07530
DNA repair and recombination proteins [BR:
mmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GYY_07530
Archaeal homologous recombinant proteins
GYY_07530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
AAA_29
SbcC_Walker_B
AAA_21
Rad50_zn_hook
AAA_27
ABC_tran
MukB
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEK20362
UniProt:
G0H206
LinkDB
All DBs
Position
1405407..1408388
Genome browser
AA seq
993 aa
AA seq
DB search
MIIKNIKMENFRSHRNTSINFNKGITSIIGQNGSGKSSIFQAMNFALFAPRGNNFRIENL
MQQGSASFSVELEFEMMGNSYLVKRKRFQNKTDDKLYVNGKLNAESASEINKKMEEILEI
DNSVFSNAIYIKQGEIANLIQMTPRDRKEVIGKLLGIEKYEKASEKMNIVKKSYEEMLFK
LEGELIQEPEILENLEKLKNEVSESEILKEEILKKYENLEKLKLEKNSELIQMEEKFAEN
NHLKENLKDVISEIKNIHLEIQNFKNSLSLVVEESKTLSENEENYKKYLELELNIKELNN
KLISHKSDYESYNKLKTIEESLIKELNNLEESLKDNKKNPDELKENLKENDEKILILDKI
KEKIKELEFIEKQIYEIKIHKKTVETLFDSVKIYDDSIKTFEELKSKKNSYENLLKEKFD
LEKKLQNETEEKTKLISELTDLKKIEEKINLENKFKEKYEDLSEKIDKLNEIVLKKESKI
SETKNSKAELEKTKDSCHVCRSKISEEKKQELLEKYNSEIENEKLSTESLKKQLEIILNK
KEQIKVKLNEIDSFKLKYGELKEKKNYSLKVEESIIETTGKLNELAEKISEYSSLNDEIS
LIENKLKDLENDYKNYNYSSQFLTKNDESEFLNKKLELSKIIGDYDSSKIENEKKSLENL
KDELKNIIYNLEREINLKTELKNIQNDISSKIGIVECYVKWEAEKSDFENKLSECKENYE
KYMESLAVLKNYSKTYSVEINNLNEFLNQKIAEKQQFCEKLLETRLKIEKNIQTVNYNPE
LHENAKRLYENILNEFNDILRTLERITSELKLKNENIIYLNKKIQNLANKKEERKKIEEF
KEYLDKIKREIFSKDGFQKYLREKYIPLIQRHTNQIFQEFELPYSHIQLKDDYSLIVDGL
PVETLSGGEQIAVSLALRLGISKAVCNNIECIILDEPTAYLDEDRRKNLLNIFKNIKTIN
QMAIITHHQELEQIADNIVKVRKIGENSKVSLE
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgattattaaaaatatcaaaatggaaaacttcagaagccacagaaacacctcgataaat
tttaacaaaggaataacttcgataatcgggcaaaatggaagtggaaagtcgtcaattttt
caagcaatgaattttgcactttttgctccgcgtggaaacaattttaggattgaaaattta
atgcaacagggctctgcatctttttctgtagaattagaatttgaaatgatgggaaatagt
taccttgtaaaaagaaaaaggtttcaaaataaaacagatgacaaattatacgttaacgga
aaattaaatgcggaatctgcatctgaaatcaacaaaaaaatggaagaaatattagaaatt
gataacagcgtattttcaaatgcaatatacataaaacagggcgaaattgcaaatttaatt
cagatgactccaagagatagaaaagaggttattggaaagcttcttggaattgaaaaatat
gaaaaagcctctgaaaaaatgaatattgtaaaaaaaagctatgaagaaatgctttttaaa
cttgaaggagaactaatccaagaacctgaaattttagaaaatcttgaaaaattaaaaaat
gaagtttctgaatctgaaattttaaaagaagaaatcttaaaaaaatatgaaaatttagaa
aaactaaaacttgaaaaaaattcagaattaattcaaatggaagaaaaatttgctgaaaat
aaccacttaaaagaaaatttaaaagatgttatttctgaaattaaaaatatacatttagaa
attcaaaatttcaaaaattcactaagtttagttgttgaagaatcaaaaaccttatctgaa
aatgaagaaaattacaaaaaatatttagaacttgaattaaacattaaagaattgaataat
aagttaataagccacaaatcagactacgaatcatataataaactaaaaacgattgaagaa
tcgttaataaaagaattaaataacttagaagaatctttaaaagataataaaaaaaatcct
gatgaattgaaagaaaatttaaaagaaaatgatgaaaaaattctaattttagataaaata
aaagaaaaaatcaaagaattagagtttattgaaaaacagatttatgaaataaaaatccac
aaaaaaacagtggaaactctttttgatagtgttaaaatttacgatgactcgattaaaact
tttgaagaactaaaatctaaaaaaaatagttatgaaaatcttttaaaagaaaaatttgac
cttgaaaaaaaacttcaaaacgaaactgaagaaaaaacaaaattaatttctgaattaact
gatttaaaaaaaatagaagaaaaaataaatcttgaaaataaatttaaagaaaaatatgaa
gatttatctgaaaaaatagataaattaaatgaaatcgttttgaaaaaagaaagtaaaatt
tcagaaactaaaaattctaaagcagagcttgaaaaaaccaaagattcatgtcacgtttgt
cggtccaaaataagtgaagaaaaaaagcaggaattgcttgaaaaatataattctgaaatt
gaaaatgaaaaattatcaactgaaagtcttaaaaaacagcttgaaatcatattaaacaaa
aaagagcagatcaaagttaaattaaatgaaattgattctttcaaattaaaatacggggaa
ttaaaagaaaaaaagaattattctttaaaagttgaagaatcgataatcgaaactactgga
aaattaaacgaattagctgaaaaaattagcgaatattcttcattgaatgacgaaataagt
ttaattgaaaataaattaaaagatttagaaaatgattataaaaattacaattattcctcc
caatttttaactaaaaatgacgaatctgaatttttaaataaaaaattggaactttcaaaa
attattggagattacgattcttcaaaaattgaaaatgaaaaaaaatcccttgaaaattta
aaagatgaattaaaaaacatcatttacaatttagaaagagaaattaacttaaaaacggaa
ttaaaaaatattcaaaacgatatttcttcaaaaataggtattgttgaatgttacgttaaa
tgggaagctgaaaaatcagactttgaaaacaaattatcagaatgtaaagaaaattatgaa
aaatatatggaaagtctggcagttcttaaaaactattcaaaaacgtattctgttgaaata
aataatttaaacgagtttttaaaccaaaaaattgctgaaaaacagcagttttgtgaaaaa
ctccttgaaacacgactaaaaattgaaaaaaatattcagactgtaaactacaatccagaa
ttgcatgaaaacgctaaaagactttatgaaaatatattaaatgaatttaacgacatttta
agaactttagagagaataacttccgaattaaaacttaaaaatgagaatataatttattta
aataaaaaaattcaaaatctggcaaataaaaaagaagaaagaaaaaaaattgaagaattt
aaggaatatctcgataaaataaaaagagaaatcttttcaaaagatggtttccagaaatat
ttaagagaaaaatatattccattaattcaaaggcacacaaaccagatttttcaggaattt
gaacttccatattcccatattcaactaaaagatgattacagcttgatagttgacggcctt
cctgttgaaacattaagcggtggagaacagattgcagtttcacttgcattaagacttgga
atttctaaagcagtttgtaataatatagaatgcattattttggatgaaccaacagcgtat
cttgacgaagataggcgtaaaaaccttttaaatatctttaaaaatataaaaacaataaac
cagatggcaataattacacatcatcaagaactcgaacagattgcagataacattgtaaaa
gttagaaaaatcggcgaaaattcaaaagtatctttagaatag
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