KEGG   Methanococcus maripaludis X1: GYY_09430
Entry
GYY_09430         CDS       T01584                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
mmd  Methanococcus maripaludis X1
Pathway
mmd03030  DNA replication
mmd03410  Base excision repair
mmd03420  Nucleotide excision repair
mmd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mmd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GYY_09430
   03410 Base excision repair
    GYY_09430
   03420 Nucleotide excision repair
    GYY_09430
   03430 Mismatch repair
    GYY_09430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmd03032]
    GYY_09430
   03400 DNA repair and recombination proteins [BR:mmd03400]
    GYY_09430
DNA replication proteins [BR:mmd03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    GYY_09430
DNA repair and recombination proteins [BR:mmd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     GYY_09430
   MMR (mismatch excision repair)
    Other MMR factors
     GYY_09430
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    GYY_09430
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Rad1 Chalcone_3 Fe-S_biosyn
Other DBs
NCBI-ProteinID: AEK20731
UniProt: G0H471
LinkDB
Position
complement(1733939..1734691)
AA seq 250 aa
MFRATCNTRDFKKVINATSNLVDEICFEVDENGIKASAMDPSHVALVSMEMPKDVFEEYE
GDIQDIGIDLEALKKIIARGRGDEKLILDLDVEKNKLNITFKSNVTRKFSIALYDVSSSN
LKVPDIEYPNSVSIKAGAFVEALKDAELVNDHITLKIDENKFVIYSKGDLNQSETVFDNS
IDDDDNALADFNMGEASRSTFNLAYLKDLTKSTAAEDLLKIYLGSDMPVKIEYEVSGSKL
VFLLAPRIES
NT seq 753 nt   +upstreamnt  +downstreamnt
atgttcagggctacatgtaatacaagagattttaaaaaagttataaatgcaaccagcaat
ctagtagatgaaatttgttttgaagttgacgaaaatgggatcaaggcaagcgcaatggat
ccgtcgcacgtggctttagtgagtatggaaatgccaaaagacgtttttgaagaatatgaa
ggcgatattcaagatatcggaattgatttagaagcacttaaaaaaatcattgcaagagga
aggggcgacgaaaaattaattctagatcttgacgttgaaaaaaataaattaaacattact
tttaaaagcaacgttacaaggaagttttcaatcgcgttatatgatgtttcatcaagtaat
ttaaaagttccagacatcgaatatccaaacagcgtttcaattaaagcaggagcatttgtt
gaagcattaaaggatgcagaacttgtaaatgaccacataacattgaaaatcgatgaaaat
aaatttgtaatttattcaaaaggcgatttaaaccagagcgaaaccgtatttgacaacagc
attgacgatgacgacaacgctcttgcagactttaacatgggcgaagcttcaagaagtact
ttcaatttagcttatttaaaagatttaacaaaatcaaccgctgcagaagatcttttaaaa
atatatcttggttctgatatgcctgtaaaaatcgagtacgaagtaagcggttcaaaactt
gtattcttacttgcaccaagaattgaatcctaa

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