Marinomonas mediterranea: Marme_0265
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Entry
Marme_0265 CDS
T01449
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
mme
Marinomonas mediterranea
Pathway
mme03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Marme_0265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mme03400
]
Marme_0265
DNA repair and recombination proteins [BR:
mme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Marme_0265
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Marme_0265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
AAA_23
AAA_21
DnaJ_CXXCXGXG
AAA_25
nSTAND3
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ADZ89569
UniProt:
F2JX50
LinkDB
All DBs
Position
complement(266100..268922)
Genome browser
AA seq
940 aa
AA seq
DB search
MDTITVRGARTHNLKNVDLDIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSTY
ARQFLSMMEKPDIDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARAGQPRC
PDHGEPLEAQTISQMVDKVLSLPEESKMMLLAPIVKDRKGEHLHTISDLLSKGFIRARID
GLVIDLDDAPALEKNKKHTIEVVIDRFKVRQDLKLRLAESFETCLALSDGIAKVINMDEP
KDEHIFSSKFACPVCGYSLTELEPRLFSFNNPNGACQTCDGLGTHQVFDPERVIQDESLT
LAEGAIRGWGRRSIFYFQQLNALANFYDFDIESKYRDIPKKFQDKILFGSGKDKIDFVYI
NERGDKMTRSHVFEGVIPNLQRRYRETESESVRDDLSQYISIQPCSDCGGSRLNRAARNV
FISEETLPEVVKLPIAECLKYFDELQLTGAKGEIASKILKEIKDRLTFLVNVGLEYLTLD
RQADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLIQTLTRLRDLGNTV
IVVEHDEDAIRIADHVVDIGPGAGVHGGEVIVSGTPEDIMACEKSVTGQYLNGVRKIEVP
ALRHPAKEGKHLTLHGAKGNNLNNVTLNIPYGVMTCVTGVSGSGKSTLINGTLFPLAATA
LNGATTLKAAPYEKIDGLDLFDKCVDIDQSPIGRTPRSNPATYTGIFTPMRELFSATQEA
RSRGYKPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEIHYK
GKNIHECLEMTIEDAREFFDPVPSIARKLQTLIDVGLGYIRLGQAATTLSGGEAQRVKLA
KELSKRDTGKTLYILDEPTTGLHFADIEQLLKVLHRLRDHGNTIVVIEHNLDVVKTADWI
VDLGPEGGSGGGYIIAEGTPEKVAKHEGSHTARFLKPMLS
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggataccattactgtgcgcggcgcgcgcactcataacctgaagaatgtggatttagac
attccacgcgacaagttggttgttattaccggactctcaggctctggtaaatcctcgctg
gcgtttgacactttgtacgcggaaggacaacgtcgctatgtagagtctttgtccacttac
gctcggcagttcctttccatgatggagaagccagatattgatcatatcgaaggtctgtca
cctgcgatttcgattgagcagaagtcaacgtctcataacccacgttcgaccgtggggaca
attaccgaaatctacgattatcttcgactcttattcgcacgagcgggccagcctagatgt
cccgaccatggagagccactcgaagcacaaaccatctctcagatggtcgataaggtctta
tctcttccagaagaaagtaagatgatgctgctcgcgccgatcgtaaaagacagaaaaggt
gagcacttacatacgattagcgatctgctatctaaaggctttatccgcgcgcggatcgat
ggtttggtgatcgatttagatgacgcccctgcgttagaaaaaaataaaaaacacacgatt
gaagtcgtcattgaccgctttaaagtccgtcaggatctaaagttgcgtttagccgaatcg
ttcgagacctgtttggcgctgtccgatggtatcgccaaagtcatcaacatggacgagccc
aaagacgaacatattttctccagtaaatttgcctgtcccgtatgtggttacagcctaacc
gagcttgaaccgagactcttctcttttaataaccctaatggcgcatgtcagacgtgtgat
gggttaggcacgcatcaggtcttcgaccctgagagagtcattcaggacgaatcgctgacg
cttgcagagggggccattcgcggttggggtcgacgaagtattttttacttccagcaactc
aatgcgttggcgaatttctatgactttgatatcgaatccaagtaccgagacataccgaaa
aagttccaagataagattctctttggttctggaaaagataagatcgatttcgtatacatc
aatgaacgtggcgataagatgacgcgctcacatgtcttcgagggtgtaattccaaactta
caacgacgctatcgcgagaccgagtcagaaagcgtacgagacgatctttctcagtatatt
agcattcagccgtgtagcgattgtggcggctctcgactaaaccgtgccgctcgcaatgtc
tttatcagcgaagagacattgcccgaggtcgttaagctgcctatcgcggaatgcttgaag
tatttcgatgagctacagctgaccggcgctaaaggcgaaatcgcgtcgaaaatactaaaa
gaaatcaaagaccgactcacattcttagttaacgttggccttgaatatttaaccttagac
cgacaggcggatacgttatcaggcggcgaagcacaacgcatacgcctcgccagtcagatt
ggcgcgggtcttgtgggtgtcatgtacattctggacgaaccttcaattggtcttcaccaa
cgggataacgagcgtctcattcaaacgttgactcgtttacgcgaccttggcaatactgtc
attgttgtcgagcatgacgaagacgcaatccgtatcgctgatcacgtggtcgatatcggc
ccgggtgctggcgtacacggcggtgaagttattgtcagcggaacgccagaagatattatg
gcgtgtgaaaaatccgtgacggggcaatatctaaacggcgtgcgtaagatcgaggttcct
gctttacgccacccagcgaaagaaggcaaacatctcacgctacatggtgctaaaggcaac
aacttaaataacgttacgttgaacataccgtatggtgtgatgacatgtgtaacgggtgtt
tcagggtctggtaaatcaacactgattaacggcacgctcttcccgcttgcagctacggca
ctcaatggtgcaacaacgctcaaagccgcgccatacgaaaaaatagacggtctagactta
tttgataaatgtgtcgatattgaccaaagcccaattggacgtactccgcgctcaaaccct
gcgacctatacaggcatcttcacaccaatgcgtgaattattctctgccactcaggaagct
cgctctcgcggctacaagccgggacgatttagttttaacgtgaaaggcggacgatgtgaa
gcctgtcagggcgacggtgtgatcaaggtagaaatgcactttttacctgacgtttatgta
ccttgtgatgtctgtaagggcaaacgatacaaccgtgaaacattggagatccactataag
ggcaaaaacattcacgaatgtttggaaatgaccatcgaagacgctcgtgagttctttgat
ccggtgccctctattgcgcgtaagctacagactctcattgacgtgggtcttgggtatatc
cgactaggtcaggctgcgacgacgctatcgggtggtgaagcacagcgagtgaaactagct
aaagagctttctaagcgcgatacaggcaaaacgctgtacattcttgatgaaccaacaacg
gggcttcattttgcggatatagagcagctgcttaaggtattgcatcgcttacgtgaccac
ggaaataccatcgttgtaatcgaacacaatttggacgttgtcaaaacagcagattggatt
gtggatcttgggccggaaggtggcagcggcggtggctatattattgcggaaggaacacct
gaaaaagtagctaaacacgagggttcacataccgctcgattcttaaaaccgatgctttct
tag
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