Marinomonas mediterranea: Marme_0377
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Entry
Marme_0377 CDS
T01449
Name
(GenBank) Sigma 54 interacting domain protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
mme
Marinomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
mme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mme03000
]
Marme_0377
Transcription factors [BR:
mme03000
]
Prokaryotic type
Helix-turn-helix
Other families
Marme_0377
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
Mg_chelatase
AAA_5
AAA_2
AAA_3
PAS
HTH_8
HTH_7
PAS_8
HTH_30
nSTAND6
AAA
HTH_22
nSTAND3
HTH_17
AAA_7
HTH_29
TsaE
Motif
Other DBs
NCBI-ProteinID:
ADZ89677
UniProt:
F2JYQ2
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All DBs
Position
392177..394210
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AA seq
677 aa
AA seq
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MKKEKQQKAQSESKPMDSVTESERACVDAKDGCTDHVEAEHKSQIEASWFRCEQFGLDHG
SEPDFGTLPQGELHDLLDQHRSLLETTENEVLPYYENILNNSSCMIVLADHQGHVLNTWG
KNRFGRDDRYGQSHGLVGGNQWTEEGVGTNAIGTALITGQAIQVGRDEHFLRANRFMVGS
ASPIYDSQNDVVGVLDISSDAYLPQDHTLGMVKLMSLSVENRLIFAAFQKDYFILTFNTN
LISLDSHWSGVLVLDENGTIVSANRRAEVVLARDLALLNIAQVFDCEMREIKHQPTNIPM
KLKALGRYQFYVNVLPPALPVMRIPDFRKTEGYVAPETTLSEPNAAPRPEPAKEKRLLPE
NVVPLEELEHGDEKVRRVVKQAHKIMEKDIPILIHGETGAGKEIFVRSLHYHSSRQAQML
VAVNCAAIPSELVESELFGYEKGAFTGAQSKGSIGLIRRAHKGTLFLDEIGEMPMAVQSR
LLRVLQERVVTPLGSTDVYPVDVKLISATNRQLKQEVHEGRFRQDLYYRISGLNIELPSL
RDRMDKREVISYIHDRLRLEDPAPLLTGEMLTLLSSHPWPGNMRQLVHVLKVGMAMADGD
VLEDWHLPDDFFDDLQSGETDELLTSNQVEGEKQESLDVRIPKLLGQFNGNVSKTAKAAG
VSRNTVYKYAKQGTGFK
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaaaaacaacaaaaagcacaatcagagagtaagccgatggactctgttacg
gaatcagagcgtgcctgcgtggacgcaaaagatggctgtactgatcacgttgaagcggaa
cataagtcgcaaattgaagcgtcatggtttcgttgtgagcagtttgggttagatcatggg
tcggaaccggattttggtacgcttccgcaaggtgaattacatgatcttttggatcagcat
cgtagtcttcttgaaaccacggaaaacgaagttcttccttattacgaaaacatcctaaat
aactcttcctgtatgattgtactggccgatcatcaaggccatgttttgaatacgtggggc
aaaaaccgctttggtcgtgatgacaggtatggccagagtcatggtttagtcggtggtaat
caatggaccgaagaaggcgtcgggacgaacgccattggtaccgctttgattacagggcag
gcgattcaagttgggcgagacgagcacttcttgcgtgcgaatcgctttatggtcgggtct
gcctctcccatttacgactcgcaaaatgacgttgttggcgtactcgacatctcctcagat
gcctatctacctcaagatcacacactgggtatggtcaaactcatgtcacttagtgtggag
aatcgactgatcttcgccgcctttcaaaaagactatttcattctcacttttaataccaac
ctcatcagtttggacagtcattggtcaggggtgcttgtgttggatgagaatggcaccatc
gtctccgcgaatcgtcgcgcagaagttgtcctagccagagacttagctttgctgaatatt
gctcaggtatttgattgtgaaatgcgcgaaatcaagcatcaaccgactaatatcccaatg
aaactgaaagcactcggtcgttaccagttttatgtcaatgtcttaccgcctgctttacct
gttatgcgaatccctgattttcgaaaaacggaagggtatgtggcacctgaaaccactttg
agcgagcctaacgctgctcctcgacctgaacccgcgaaagaaaagcgattactgcccgaa
aatgttgttccattggaagagttagagcatggcgacgaaaaagtacgccgtgttgttaag
caagctcataaaattatggagaaagacattccaattctgattcatggagaaaccggggct
ggtaaggaaatcttcgtgcgcagtttgcattatcatagctcgcggcaggctcaaatgctg
gtggcggtaaactgtgccgctatcccatcagaattggttgaatctgaactttttggctat
gaaaaaggcgcgtttaccggagcacaaagtaaagggtcgattggactcatacgacgcgcg
cataaaggcacgttatttctagacgaaattggtgaaatgccgatggcggttcagtcccga
ttgttaagagtgttacaagagcgagtcgtcacaccgttaggttcgaccgacgtctacccc
gttgatgtaaaactgatttccgcaaccaatagacaactaaaacaggaggttcacgaaggt
cgatttcgacaagatctgtattatcgaatttccgggttgaatatcgagttgccctcattg
cgagatcggatggataagagagaggttatttcttacatacacgaccgattacgactagaa
gacccagcgccattacttacgggtgaaatgttgaccttgctgagttcacatccgtggccg
ggaaacatgcgtcagttggttcacgtattgaaagttggtatggcgatggccgacggcgat
gtattagaggattggcatttgccggatgacttttttgacgatcttcagagcggcgaaacg
gatgagcttttgacttcaaaccaagttgagggtgaaaagcaagaaagcctagacgtgaga
attcccaaactgctagggcagttcaacggcaatgtttctaagacggcgaaagcggcaggc
gtaagtcgcaataccgtgtataaatatgcgaaacaagggacgggctttaaatag
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