KEGG   Marinomonas mediterranea: Marme_0779
Entry
Marme_0779        CDS       T01449                                 
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
mme  Marinomonas mediterranea
Pathway
mme03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mme00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Marme_0779
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mme02044]
    Marme_0779
Secretion system [BR:mme02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Marme_0779
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 nSTAND3 Zeta_toxin AAA_25 AAA_33 TniB Clp_N IstB_IS21 AAA_24 AAA_7 Sigma54_activat RuvB_N NBD_SMAX1 Rad17 SLFN-g3_helicase ABC_tran_CTD DUF4140
Other DBs
NCBI-ProteinID: ADZ90062
UniProt: F2K2L7
LinkDB
Position
838738..841359
AA seq 873 aa
MSQVKLGNLVGKLEPELKNALEEAAGSAMKQTVPAIEVEHWFIQLIVNKEVNLNSFFQRQ
KIDLNGLLTELTARVERLVKGATGQPTISATVSEAMEEAWLIASVNYGHGQITSLHLLQA
LVQSDSFGMKKLSLESLQNVSTEALSAHIAQLKVAGVSSSSSASPSAAEGATAAPVAGGA
LDKYTVNLTQQARDGKIDPISGRNSEVRLAIDILCRKRQNNPILVGEPGVGKTAVVEGLA
LRIVEGEVPPVIQGVEIHSLDLGLLQAGASIKGEFENRLKDVINEVKSSETPIIVFIDEA
HTLIGAGGAAGQNDAANLLKPALARGEFRSIAATTWAEYKKYFEKDPALTRRFQVVKVEE
PDAEDALQMLRGVAASLRKHHGVFIREDALEAAVHLSIRYLPARQLPDKAISLLDTSCAR
IALTQGAKPEKVEQLEQQIRYLNSELSAFEVEDAVLTDQAEDRDALRDSIAEKEAELELL
MARWEQEKSLVDEITVLSEDIEANLKEGADATKQAALQTKMDDLSKLQGDDPLVFALVDS
QVIASVIESWTGIPAGNMVKGEVAELLSLEDALHKRVIGQQAGISELAKSIRISRAGLTD
SRKPVGVFLMCGPSGVGKTETAMALADEVFGGGDNLTVINMTEFKEEHKISMLLGSPAGY
VGFGEGGVLTEAIRRNPYSVLLLDEMEKAHPGVHDLFYQIFDKGHIKDSEGRTIDFKNTI
IVMTSNAADQAICDICNAAEDRPVNEELVEEIRPALQQYFKPAFLGRATIVPYYPLNAEE
LGKITEISLNRIAKKLNEKYKAEFSWDDSFIEFVVSRNTDPTTGGRAIEQIINRSLMPRL
AEQCIQRLSEGLPIERVSVTIEPMTADLSLHIE
NT seq 2622 nt   +upstreamnt  +downstreamnt
atgtcacaggtaaagttaggcaatcttgtcggaaaattagagcctgagctaaagaatgcg
cttgaagaagccgctgggtcagcaatgaagcaaacagtacctgctattgaggttgagcac
tggtttattcagctcatcgtcaataaagaggtaaatctaaattcttttttccaacgtcaa
aaaattgatttaaacggattgctgacggagctgactgcccgagttgagcgtcttgtaaaa
ggggcaaccggacagccgactatcagtgcaacagtcagtgaagcgatggaggaagcatgg
ttaattgcatccgttaattatggtcatggtcaaattacaagcttgcatctgttgcaggca
cttgttcagtcagacagctttggtatgaagaaactgtctttggagtcgcttcagaatgtt
tcaacggaagccttgtccgcacacattgcccaacttaaagtcgcaggcgtttccagttct
tcatcagcgtcgcctagtgcagcagaaggcgcaacagccgcccctgttgcgggtggtgcg
ttggacaaatacactgtcaacctgactcaacaagcgcgcgatggaaaaattgacccaatc
tcaggtcgaaacagtgaagttcgcttagcgattgatattctgtgccgtaagagacaaaac
aatccaatattggtgggcgagcctggagttggtaaaacggccgtcgttgaaggcttggcg
cttcgaattgtcgaaggtgaagtgcctcctgttattcaaggtgtcgaaatccattcactt
gacctcggtcttctccaagcaggcgcaagcattaaaggggagtttgagaaccgtcttaaa
gacgttatcaatgaagtgaagagctcagaaacaccaatcatcgtctttatagacgaggcg
cataccttgattggtgctggtggcgcagcgggacaaaatgacgccgcaaacttattgaaa
cccgcgttagcgcgtggagaattccgctcgattgcagcaacaacatgggctgaatacaaa
aagtatttcgagaaagaccctgcattaactcgtcgttttcaggtagttaaagttgaagag
cctgacgctgaagatgcattgcaaatgttacgtggtgtagcggcgtcattacgaaaacac
cacggtgtctttatacgtgaagatgcgctcgaagcagcggtacacttatccattcgttat
cttcctgctcgtcaattgccagataaagcgattagccttttggatacctcatgtgcccgt
attgcgttaactcaaggcgcgaaacctgaaaaagtagagcagcttgaacaacaaattcgc
tacttaaacagcgagctgtcggcatttgaagtggaagatgccgttctcactgatcaggca
gaggatcgcgacgctttgcgtgacagcattgctgaaaaagaggctgagcttgagttattg
atggcacgttgggagcaagaaaagtcgcttgttgatgagatcaccgttttaagtgaggac
attgaggctaatcttaaagaaggtgcggacgcgactaaacaggcagcacttcaaacgaaa
atggatgatttgtctaagttgcaaggcgatgatcccctcgtgtttgcactggttgatagc
caagtcattgcatcagtcattgagagttggacgggaattcctgctggcaacatggtgaaa
ggtgaagttgctgagcttttatctcttgaagatgcattacataagcgcgttatcggacaa
caagcggggattagtgagcttgctaagagcattcgtatttctcgtgccggcttaacggat
agccgaaaaccggttggtgttttcttgatgtgcggtccaagtggtgtgggtaaaaccgaa
actgccatggcacttgccgatgaagtgtttggcggtggggataacttgacggttatcaac
atgactgagtttaaagaagagcataaaatctctatgttattgggctcgcctgctgggtat
gtcgggttcggtgaaggtggtgtattaaccgaagccattcgccgtaatccatactccgtt
ttattattggatgaaatggaaaaagcgcatccaggcgtacatgatttgttttatcagatt
ttcgacaaaggccacataaaagacagtgaaggccgtacgatcgactttaagaatacgatt
attgtgatgacgtcaaatgcggctgatcaagctatctgcgatatctgtaatgcggctgaa
gatcgccctgttaatgaagagcttgtcgaagagattcgccctgcacttcagcaatacttc
aagcctgcctttcttgggcgcgcgaccatcgtgccttactacccattaaatgcagaagag
cttggtaagatcactgaaatcagtttgaatcgaattgccaaaaaattaaatgaaaaatac
aaagcggaatttagctgggacgactcttttatcgagtttgttgtctcgcgcaatacggat
ccgactactggtggacgcgctattgagcaaattatcaatcgttcacttatgccgcgattg
gcagagcaatgtattcaacgattaagtgaaggattacccattgaacgagtgtcagtgacc
attgagccaatgacagccgatttgtcgcttcatatagaataa

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