Marinomonas mediterranea: Marme_0840
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Entry
Marme_0840 CDS
T01449
Name
(GenBank) transcriptional regulator, LysR family
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
mme
Marinomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
mme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mme03000
]
Marme_0840
Transcription factors [BR:
mme03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Marme_0840
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ADZ90118
UniProt:
F2K365
LinkDB
All DBs
Position
complement(914296..915516)
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AA seq
406 aa
AA seq
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MSASMPIPNLRHLRVFLSVIEQKSITKASDSIFLSQPAITQAIAKLEKQLGANLFERHSD
GMYPTKSGSIWQNRVTRAIEHLQLATQHILQEAQGRDAVHKNILAQISTTQLKALVAVCE
AQNFSIASRNLGISQSSVHRAARDLERLLDITLFEKNSLGIGATAAAKELSKATKLAFNE
LKQGVSEIHALQYRDVSTIDIGSMPLARTTILPKSILRFNETHNDVNVRVIEGPYQDLLH
HLRQGDIDMILGALRDPLPADDVIQEALWHPPLSIVARHGHPLFEKGEVSAIDLADYAWV
VPGEGTPTRQAFENLFSEADIERPKRIIESSSQILIRELLLESDRLTLISAAQIEREINI
NLLRVLPFELEHTRRPIGLCVRKNWLPTTTQSHFLSMLREVAEVFR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgtctatgccaattccgaatttgcgccatctacgagtgtttctttctgtaata
gagcaaaaaagtattacgaaagcctccgatagcattttcctctctcaaccggcgatcaca
caagcaattgcaaaactagaaaaacaattaggtgcaaacttgtttgaacgacactcagac
ggaatgtacccaaccaaatcaggtagcatctggcaaaaccgtgttacccgtgccattgag
cacctacaactcgcgacccagcatattttacaagaagctcaagggcgtgatgcggttcat
aaaaacattctcgctcagatcagtaccactcaattaaaagcattggtcgccgtctgtgag
gctcaaaacttcagtatcgccagccgtaacttaggcatttctcaatcgtctgttcataga
gcggcccgcgaccttgagcgattgttagacatcactctatttgagaaaaacagtctcggc
atcggagctacggcagcggctaaagagctgtccaaagccactaagcttgcctttaatgag
ttaaagcaaggtgtttcggaaattcatgctctgcaataccgtgacgttagtacgatcgat
atcggcagtatgccactggctcgaacgacgatcctaccgaaatccattcttcgatttaac
gaaacgcacaatgacgtcaacgtacgcgtaatagaaggcccttatcaagatttactccat
caccttcgccaaggtgatatcgatatgatcttaggcgctttgcgcgaccctctacccgct
gacgacgttattcaagaggcattatggcaccctcctctttccatcgtagcaagacacggt
cacccactgtttgaaaaaggcgaggtctcggcgatagatttggcggactatgcgtgggtt
gttcctggagaagggacaccgacacggcaagcctttgagaacctcttttcggaagccgat
attgaacgcccgaaacgtattattgaatccagttctcagattttgattcgggaactgctg
cttgagagcgatcgcttaactttaatttcagcggctcaaatcgagcgagaaatcaatatt
aatttactccgagttcttccgtttgaacttgaacacacccgccgccctatcggtttatgt
gtgcgtaaaaactggcttcccacaacaacacagtcccatttccttagcatgcttagagaa
gtcgccgaggtgtttagataa
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integrated database retrieval system
