Marinomonas mediterranea: Marme_0981
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Entry
Marme_0981 CDS
T01449
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mme
Marinomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
mme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mme03016
]
Marme_0981
Enzymes [BR:
mme01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Marme_0981
Transfer RNA biogenesis [BR:
mme03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Marme_0981
Prokaryotic type
Marme_0981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ADZ90256
UniProt:
F2K4F7
LinkDB
All DBs
Position
1105217..1106146
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AA seq
309 aa
AA seq
DB search
MGKTQWRQVDGVVLLNKPLGLSSNQALQRVRRLYRAAKAGHTGALDPLATGMLPLCLGEA
TKFSQFLLDADKRYITCIELGATTTTGDKEGEVLSTDPVPVLSDSELETLLDRFRGDINQ
VPPMYSALKHEGKPLYEYARKGISIERKRRQVTIRNLSVIERTDNTLTLDITCSKGTYIR
TIGEDIGDALGCGAHLKTLHRVSTAGYNPNDMLTLEEFEALQTSSESALDGRLMPSDTAV
SHFEKVSLSDEEAKEMTFGRPLNDTRNITSDSLVRLFRLSDGLFLGLGIVKDRKIKAHRL
INTSELAQK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagacacaatggcgtcaggttgatggcgtcgttttattaaataaacctcttggt
cttagctctaatcaagctttgcaaagagtgcgccgattgtatcgtgctgcaaaagcgggc
catacaggcgcacttgatccccttgctaccggaatgttgcctttgtgtttgggagaagct
acaaagttttcccaatttctacttgatgcggataaacgatacattacgtgtattgagttg
ggtgcaacgacgacgaccggcgacaaagaaggagaagtgcttagcacggatcctgttcca
gtactgtctgatagtgagcttgaaacattactcgatcgctttcggggtgacattaatcag
gttccgcctatgtattccgcgcttaagcatgagggaaaacctctgtacgagtatgctaga
aaaggcattagtatagagcgaaagcgtcgccaagtgacgatccgaaatctatcggttatt
gagcgaacggataatactcttaccttagatatcacctgctctaagggcacgtatatccgg
acaattggtgaagatattggtgatgcactgggctgtggggcgcacctaaaaactctgcat
cgagtgtcaacagctggatacaatccaaatgacatgctcacgcttgaagagtttgaagcg
ctgcaaacgtctagtgaatctgcgcttgatgggcgtcttatgccatcagatacggcggta
tcacacttcgaaaaagtgtctctttcagatgaagaagcgaaagaaatgacctttggtcgt
cctttgaacgacacgcgaaatattacctcggattcgcttgttcgcttgtttagattgtcg
gacggtttatttttaggcttagggattgtcaaggatcgcaaaattaaggcgcatcgcttg
ataaataccagtgagttagcgcaaaaatag
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