Marinomonas mediterranea: Marme_1179
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Entry
Marme_1179 CDS
T01449
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mme
Marinomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
mme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mme03016
]
Marme_1179
Enzymes [BR:
mme01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Marme_1179
Transfer RNA biogenesis [BR:
mme03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Marme_1179
Prokaryotic type
Marme_1179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
ADZ90452
UniProt:
F2JUN7
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All DBs
Position
1320425..1321603
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AA seq
392 aa
AA seq
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MEEYTECKESRNYTELSDTLRTDWSYAWGAPTVKGKLKVYPQDFYVEELLGFEPSGAGEF
LYILIEKVGVNTDYLAKRIAQVFDISVSKISYAGVKDRHACTRQWFCLHVLGKQLDLSTL
SDVFRMPEQVRVLKEVRHSKKLKTGGHKGNRFVLRVRELERQDSDQFLERLELIKRFGVP
NYFGAQRFGIDGNNLQHGLGFVGRGRQSKRRLSKTEGFWLSAIRSWFFNESLHRQVLSGQ
WERLYVGDIMQYSTQNQQRRVKALSNETLLALRTGKCSPIHPLLSDGWEKGTSEIRAKVI
QEIIDQHSDLYKGFLTFECSREDRLTRIIPVDMAWELLQSKRSGDDIETPREDLILQFEL
PKGAFATTVMRELILLEDCSQYERSKGREERR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatacacagagtgcaaagaaagccgcaattacacagaactgagtgacactttg
agaacagattggtcatatgcttggggcgccccaaccgtcaaagggaagcttaaagtttac
cctcaagacttctatgttgaggagttgttgggctttgagccttctggagcgggagagttc
ctatatatattgatagagaaggtcggtgtaaataccgattatctcgcgaagcgtattgcg
caagtttttgatatatctgtgagcaaaatatcctacgcaggagtcaaagatcgtcatgcg
tgtacaaggcagtggttctgtttgcatgttttgggaaagcaattagatttgtctaccttg
tcggacgtgtttcgaatgcccgaacaagttcgtgtcctaaaagaagtgagacattcgaag
aaactaaagacaggcgggcataaaggcaaccgtttcgtgcttagagtgcgggaattagag
cgtcaagacagtgatcagtttttagagcggcttgagttgattaagcgttttggtgttccc
aactacttcggcgcacagcggtttggcattgatggcaataatttgcaacatgggctgggt
tttgttggacgcggacggcaaagtaaacgtcgcttaagcaaaacagaaggcttttggtta
tccgctatccgctcttggttcttcaatgagagtttgcatcggcaggttctaagtggtcaa
tgggagcgcctttatgttggcgatatcatgcaatactccacacagaatcaacagcgtcgc
gttaaagcgctttcaaatgaaacactattagctctaagaacaggtaaatgctcccccatt
caccctttgttgagtgatggttgggaaaaaggaacgagtgagatacgggctaaagtcata
caagaaatcatcgatcaacattctgatttatataaaggtttcttaacatttgagtgtagt
cgtgaagatcgtctcacgcgaatcattcctgtggatatggcgtgggaattgcttcagagc
aagcgctctggtgatgacatagaaacacctagagaggatctcattttacagtttgaattg
cctaaaggggcgtttgcgacgaccgtgatgcgagaacttattctgcttgaggactgctcc
caatacgagagaagtaaggggcgagaggaacgtaggtga
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