Marinomonas mediterranea: Marme_1184
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Entry
Marme_1184 CDS
T01449
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
mme
Marinomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
mme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mme03021
]
Marme_1184
Transcription machinery [BR:
mme03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Marme_1184
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
DUF4423
Motif
Other DBs
NCBI-ProteinID:
ADZ90457
UniProt:
F2JUP2
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Position
1324872..1325861
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AA seq
329 aa
AA seq
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MKATEMEKTELVTTLADNVDLELDLEEGQDTTEFDSAVSARYSNEDNSKSLDVTQLYLSE
IGFSPLLTAEEEVYFARLALKGDEAARKRMIESNLRLVVKISRRYLNRGLSLLDLIEEGN
LGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAARE
LTQQLDHEPSPEEIADKLDRPVEDVQKMLSLNERISSIDSPLGGSEGDKSLVEVIPDTQH
SNPEDERQEGDVLNSIDGWLDALNEKQREVIARRFGLRGYEPSTLEDVGAEIGLTRERVR
QIQVEALRKLRLMLDKQGLSLDDVIQLDY
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgactgaaatggaaaagactgagttagttactacacttgcagacaatgttgat
ttggaacttgaccttgaagaaggccaagacactactgaattcgattctgcagtcagtgct
cgttacagcaacgaagataacagcaaatcgttagatgttacgcagctatatttaagtgaa
attggtttttcaccactgttaacggcagaagaagaagtttattttgcacgacttgcttta
aaaggagatgaggcagcacgcaaaagaatgattgagagtaatttacggctcgttgtaaag
atctcaaggcgttatttgaacagaggcttatcattactggatttgattgaagaaggtaat
ttaggtcttatcagggctgttgaaaaatttgatccggagcgtggctttcgcttctcaacg
tacgcgacttggtggataagacagaccatagagcgtgcaatcatgaatcagactcgaacc
attcgtttaccgattcacgttgtcaaagagctcaatgtgtaccttcgggctgctcgggaa
ttgacccagcaacttgaccatgagccgagcccagaagaaattgcggataaactagatcgt
cctgttgaggacgttcaaaaaatgttgagtttgaatgagcgaattagctctattgattct
cctcttggcggcagcgaaggcgataaaagtcttgttgaggttattcctgatacgcaacat
tctaaccctgaagatgagcgtcaagaaggggatgttctcaacagtattgatggttggtta
gatgccttaaatgaaaagcagcgagaggtcattgctcgtcgatttggtttacgtggctac
gaacccagcacgctagaagatgtcggtgctgagattggcttaacgcgagaaagagttcga
caaattcaagttgaggcgttacgcaaacttagactgatgctggacaagcaaggtttgtct
ttggatgatgttattcagctcgattactag
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