Marinomonas mediterranea: Marme_1768
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Entry
Marme_1768 CDS
T01449
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
mme
Marinomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
mme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mme03019
]
Marme_1768
03009 Ribosome biogenesis [BR:
mme03009
]
Marme_1768
Messenger RNA biogenesis [BR:
mme03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Marme_1768
Ribosome biogenesis [BR:
mme03009
]
Prokaryotic type
rRNA processing factors
Marme_1768
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
ADZ91024
UniProt:
F2K193
LinkDB
All DBs
Position
1959718..1961172
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AA seq
484 aa
AA seq
DB search
MSEDVLINVTPMEIRVALVENGVLQEVYIERSSRKGIVGNIYQGKVVRVLPGMQAAFVDI
GLERAAFIHVSEIADRDAVNPSDQIGDYLREGQSLVVQVTKDPISTKGARLTTHLSIPSR
YLVYMPDQAHVGVSQRIEDESERERLKSLVSKALTDADETSGYILRTAAEKAGEEEILSD
IKFLTRLWQSVKKRMKSAKAPSVIYEDLPLHLRTMRDLISLTTEKIKIDSKENFAKLRSF
ADDFIPELSNHIEYYPGERPIFDLYSVEDEIQRALDRKVSLKSGGYLLVEQTESMTTIDV
NTGAYVGTRNLEETIYKTNLEAATAIGRQLRLRNLGGIIIIDFIDMEDEEHKRQVLRMLE
KILEVDHAKTKITGVSELGLVEMTRKRTRESLGQVLCEPCRACRGSGLVKTPETVCYEVF
REILRADRAYNSQTYTVLASSSVVERFLDEESVAVAELEAFIGKTIRFQVDPVYTQDQYD
VVLR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagatgttctcattaatgtaacgccaatggagatacgggtagcattagtcgaa
aatggcgtgttacaagaagtctatattgagcgttctagtcgcaaaggtattgtaggtaac
atatatcaaggtaaagttgtcagagttttaccaggtatgcaggccgcttttgttgatatt
ggtttagagcgggctgcatttatacacgtttccgagattgctgaccgtgatgcggttaat
cccagtgatcaaataggcgactatttgcgagaaggtcaatcgctcgttgttcaggttacg
aaggacccaattagtaccaaaggtgctcgtctaaccactcacttgtctattccttcaaga
tatttggtgtatatgcctgaccaagcacatgtcggtgtaagtcagcgtattgaagatgaa
agtgagagagagcgcctgaagtcgcttgtgtctaaagccttgacggatgcagatgaaaca
agcggctatattctacggaccgctgcagagaaggctggagaagaagagattctttcggat
attaagtttctcacgcggttatggcagtccgtcaaaaagaggatgaagagcgctaaagct
ccgtcggttatttacgaagatttaccgcttcatttaaggacaatgcgtgaccttattagc
ctgacaaccgaaaaaatcaagatcgattctaaagaaaattttgccaaacttagatcattt
gctgacgatttcattccagaactttccaatcatattgagtattatcctggtgagcgcccg
atatttgatctttatagtgtcgaagatgagattcaaagggctttagaccgaaaagtgtca
ttgaagtctggagggtatttgttagtcgaacaaactgagtcaatgacaaccatcgatgtc
aatactggggcgtatgtcggcacacgaaacttagaagagaccatttataagaccaactta
gaggcagcgacggctattggtcgacagcttaggttacgtaatcttggtggaattataatc
atcgattttatcgacatggaggatgaagagcataagcgtcaggttcttcgcatgttggaa
aaaatacttgaagtggatcacgcaaaaacgaaaatcacgggtgtgtctgagctagggtta
gtcgaaatgacgcgtaaaagaacgcgagaaagcctaggtcaggttttgtgtgagccatgt
cgagcttgccgtggtagtggcttggtaaagacgcctgagacggtatgttatgaagtgttt
agagagattcttcgtgccgatcgtgcatataactctcaaacgtatactgtgttggcttcg
agttcggtcgttgagcgtttcttagacgaagagagtgttgcagtcgctgagttggaagct
tttataggtaaaacaattcgattccaggttgaccctgtttatacgcaggatcaatatgat
gtcgtattgaggtga
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