Marinomonas mediterranea: Marme_1969
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Entry
Marme_1969 CDS
T01449
Name
(GenBank) Crossover junction endodeoxyribonuclease ruvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
mme
Marinomonas mediterranea
Pathway
mme03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Marme_1969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mme03400
]
Marme_1969
Enzymes [BR:
mme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Marme_1969
DNA repair and recombination proteins [BR:
mme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Marme_1969
RecFOR pathway proteins
Marme_1969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
ADZ91217
UniProt:
F2K2T4
LinkDB
All DBs
Position
2154387..2154944
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AA seq
185 aa
AA seq
DB search
MARILAIDPGSRITGYGVIDSKNGKTTYVSSGCVRLPDANLAVRLRVIFESVSELISQFS
PSEFAIEEVFMAKNASSALKLGQARGAAIVSAGVADLPVYEYAARRVKQSIAGNGNADKA
QIQAMVQLLLKLPSPPQADAADALAIAMCHANTRTSGGLEYGVGKRAGKRTGRWSAADLR
KYGDK
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgtatattggcaattgaccccggttctcgcataacagggtacggggttattgat
tctaaaaatggtaaaacgacatatgtatcaagtggttgtgttcgattgcccgatgctaac
cttgcggtgcgtttaagggtgatatttgaatccgtttcagagttgatttctcagttttca
ccctcagaatttgctattgaagaagtatttatggctaaaaatgcgagttctgcacttaaa
ttgggtcaggctagaggggcggctattgtctcggctggcgttgctgatttacctgtttat
gaatatgcagcgcgacgtgtaaagcaatccattgcagggaacgggaatgctgacaaagcg
caaatacaagccatggttcagcttttgttaaagctgccttcgccaccgcaagcagatgcc
gctgatgcgttggcaattgctatgtgtcacgcgaatacaagaacgtcgggtggtttagag
tatggcgtgggtaaacgcgctggtaaacgtaccggccgttggagtgccgcggatttgagg
aaatacggtgataagtag
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