Marinomonas mediterranea: Marme_2325
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Entry
Marme_2325 CDS
T01449
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mme
Marinomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
mme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mme03400
]
Marme_2325
DNA repair and recombination proteins [BR:
mme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Marme_2325
Archaeal homologous recombinant proteins
Marme_2325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_15
ABC_tran
nSTAND3
AAA_21
RsgA_GTPase
cobW
MMR_HSR1
Emaravirus_P4
GTP_EFTU
AAA_22
DUF87
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ADZ91566
UniProt:
F2JU54
LinkDB
All DBs
Position
complement(2552484..2556284)
Genome browser
AA seq
1266 aa
AA seq
DB search
MKICSLRLKNLNALKGEWYLDFESSPFDENGLFAIVGPTGAGKSTLLDAICLALYHETPR
GLKVSKSVNDIMTRSTSDCLAEVVFEVNGKRYRSFWSQRRARGRSDGNLQDAKCEIADGE
GKLLTTKTNEKIRLIAELTGLDFGRFTRSMMLAQGGFAAFLNSNEREKAELLEELTGTEV
YAQISSFVFERYREEKQAIEQLEAIHGSVEVMEDDVLDSLRLDLDSVQEKATQLNTQLQN
HQYAYQWLHAFLSAQSQLSNATARQAEVVHQSTLFKDEEAQLAFHEKAVSLNEVRAALLA
SQSKLATLDKSQSDLITTAAREADVIKTIEAELSQSRQQLAHSEQASDAFEESVKRDIEP
LLRSQEREQQTSDGLSLALKEQMLSLNGMTTQYELVSKKQSDLVERQTKLVSVLSNAPDN
VQARVSQLPYVLNLKEQYLELKQDNAQLALRKKDLNATSQLWRDKEESTKAEQTNTLVVT
RELDTELEALLDSAETDRLSIDRCHRVKNLLPSVMRHKEKSDALGMLSATLDEHRAELNR
LENSSEVVTNELGVLSAQHEEAKAFLEHLSKRVELERRVASLEAERARLIDGEACPLCGS
DTHPWAEDTPTHTDSLEIERLKRQALYDDLEHKLQEKRLEVRGMTERMALTRNTIEQRSL
EFEAQKHELESIEIDFSSGFENLALMSPTERVEKLESELIVLSGAVTLAEERDKARDDAN
ERKRHLASLLKDHQYSLVNIAQEIKRHTESIGELDHRIDQNTSAIEDTFEKMRVGVAELK
GTGNIDEQLGTLDNNNTLDSFPEVYRYHSEKEASLKEWDLNNAEREIFKALALLERCYQE
WVSASTALDLVERDLREIEIKRTHLEAGKRELTEKADALKVDFERAQKTIAEIEQALFKF
LTGRSLDAVRATYVKAVDSCRQSLTVFEQKLHRQQVSVAELKQKEILNTQLIVQEREVLS
LADQKWCAERLAKGFHDDASWEASQLNDELYQSMKQRQERLAKQLEEATRDVDAATLALE
SSKTGKEAFEKNGFQIELNEEGLLQLQGVVSEVSDSLSATQQEVGELKATLEHELAKRAR
LKEQFAALHARKVQFEAIATLNNLIGSADGAKFRRYAQSVTLDNLVYLANRRLKTVQPRY
QLKRNLQEGLSLLVVDTWQADITRDTKTLSGGESFLVSLSLALALSDLVSHKTSIDSLFL
DEGFGTLDDDTLEIALDALDQLNASGKHVGVISHIDALKERIPTQITVSKQAGLGFSRLS
ECYSVR
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttgttcgttaagacttaaaaacctaaatgcgcttaaaggagagtggtattta
gatttcgagtctagcccattcgacgaaaatggtttgttcgcgattgtcggtccgaccggc
gctggcaagtccaccttgttggatgctatttgtcttgctctttatcacgagacgcctcgc
ggtctaaaagtatcgaaaagtgtcaatgacatcatgacgcgttcaacgtcggactgtttg
gctgaggttgtttttgaggttaacggtaaacgctatcgctcattctggagccagcgtcgt
gccagaggacggtctgatggcaatctacaagacgcaaaatgtgagatcgccgatggcgaa
ggcaagctgctaacgactaagacaaacgagaaaatacgtttgatcgctgagttgacggga
ctggactttggtcgttttacccgttcaatgatgttggctcaaggtggttttgctgcgttt
ttgaattctaatgagcgtgaaaaagcggaattgctggaggagttaaccggaaccgaagtc
tatgcgcagatttcaagttttgtgtttgagcggtatcgcgaagagaagcaggccattgag
caacttgaggcgattcatggcagtgtcgaggttatggaagacgacgtactggattcattg
cgtcttgacctagattctgtgcaagaaaaggcaactcaattaaacacgcagttgcaaaat
catcaatacgcctatcaatggcttcacgcttttctaagtgctcagtctcaactgtctaac
gccacagcgcgacaggcagaggtcgttcatcaatcaacgctatttaaagatgaagaagcg
caactggcttttcatgagaaagctgtgtcattgaatgaggtccgtgcggcgttattggct
tcgcagtccaagttggcaacgttagacaagagtcaatctgatttgatcacaaccgccgca
agagaagcggacgttatcaagaccatagaagcggagttgtcccaaagtcgacaacaatta
gcgcatagcgagcaagcgtcggacgcatttgaggaaagcgtgaagcgtgatattgagcct
ttgttgcgttcacaagaaagggagcagcaaacgtcagatgggctttctctggcattgaaa
gagcagatgctttcgctcaatggcatgacgactcaatacgagttggtgagcaagaaacaa
tctgatttggtggaacgccagactaagttagtctcagtgttgtctaacgcacccgataac
gtacaagcgcgagtgagtcagctgccctatgtgttgaatctaaaagaacagtatctagag
ctgaaacaggacaacgcgcaactggcgctgcgtaaaaaagacctcaatgcgacgagtcag
ctctggcgcgataaggaagaatccaccaaggcagagcaaaccaacacattggttgtcact
cgtgagctcgacactgagctcgaagcgctcttagattcggcggaaactgatcgactttct
attgatcgatgccatcgagtgaaaaacctactgcctagtgtgatgcgtcataaagagaag
agcgatgcactgggtatgcttagtgcgacattggatgagcatcgtgcggagcttaatcgg
ctcgaaaatagctccgaagtggtgactaacgagctaggtgtattaagtgctcagcatgag
gaagcaaaagccttcttagagcatttatcgaagcgagttgagttagagcgccgtgttgcg
agcctagaagcagaaagggcgcgactgattgatggtgaagcctgtccgctttgtggtagt
gatactcacccttgggcagaagatactccaactcatacggacagtttagaaatagagcgc
cttaaaaggcaggctttatacgacgaccttgagcacaagttgcaagaaaaacgtcttgaa
gttcgcggtatgaccgagcgtatggcgttaacgcgtaatacaattgagcagcgaagcctt
gagttcgaagcgcaaaaacacgagcttgagtctatcgagattgatttttctagtgggttt
gaaaacttggcgttgatgtctccaaccgaacgtgtagaaaaactcgaaagtgagcttatc
gtgttgtcgggcgcagtaaccttggcagaagagcgagataaagcacgtgacgatgctaat
gaaagaaagcgtcatttagcgagccttctaaaagatcaccagtattctcttgtgaacatt
gctcaagagataaagcgacacacagaatcgattggcgagttggatcatcgtattgatcaa
aacaccagtgctattgaggatacgttcgaaaaaatgagggttggcgttgctgagcttaaa
ggcacgggtaacatcgatgagcagctcggcacgctggataataacaatactctagatagt
tttcctgaggtgtatcgttaccattcagaaaaggaagccagtctaaaggaatgggatcta
aataatgcagagcgggagatctttaaggcgctcgcgttattggaacggtgttatcaagag
tgggtttcggcatcgacagcgttagaccttgtagagcgagacctccgtgagatagagatt
aaacgaacacacctagaggctggtaagcgagagttaacagaaaaagccgatgcgcttaag
gttgattttgagcgcgctcaaaaaacgattgctgaaattgaacaagcattgtttaagttc
ttaactgggcgttctctggatgccgtgagagcaacgtatgttaaggcggtggattcgtgc
agacagagccttacagtttttgagcaaaagttacatcgtcagcaggtatcagtggcggaa
ttaaagcagaaagaaatactcaatactcagttgattgtgcaagaacgagaagtgctttcg
cttgccgatcagaaatggtgtgctgagcgcttggcaaaaggctttcatgatgacgcttca
tgggaggcaagtcagttaaatgatgagctgtatcagtcaatgaaacagcgtcaagaacgt
ttagctaagcaattggaagaggcgacacgtgatgtcgatgcagcgacgttggcgcttgaa
tccagtaaaacgggtaaagaggcgtttgagaaaaacggctttcaaatcgaattaaacgaa
gaaggtttgcttcagttacagggtgttgtctctgaggtgtcagattctttgagtgcaaca
cagcaggaagtaggagagcttaaagcaacgcttgagcatgagcttgctaaaagagcgcgt
ttaaaggagcagtttgcggcgttgcacgctagaaaagtgcagtttgaagcgattgcgacc
ttgaataacttgattggctcggcagatggcgccaaatttcgccgctatgcgcagagcgta
acgctcgacaatcttgtttatttagcgaatcgacgcctgaaaacggtgcagcctcgatat
cagctaaaacgaaacctacaggaaggtctgtcgttgttggttgtggatacttggcaagcg
gacatcacgcgtgataccaaaaccttgtcaggaggtgagagctttctcgttagtttgtct
ttggcgctcgcgttgtcggatctagtgtcgcataaaaccagtattgactctcttttcctc
gacgaaggctttgggacgcttgatgacgacacacttgaaattgcgctagatgcgttggat
cagcttaatgcgtccggcaaacacgttggggtgattagtcatattgacgcgctgaaggaa
cgtatacccactcagataaccgtgtcgaagcaggctggattagggtttagccgtttatcg
gagtgctactctgttcggtaa
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