Marinomonas mediterranea: Marme_3240
Help
Entry
Marme_3240 CDS
T01449
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
KO
K10943
two-component system, response regulator FlrC
Organism
mme
Marinomonas mediterranea
Pathway
mme02020
Two-component system
mme02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mme00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Marme_3240
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Marme_3240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mme02022
]
Marme_3240
02035 Bacterial motility proteins [BR:
mme02035
]
Marme_3240
Two-component system [BR:
mme02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
Marme_3240
Bacterial motility proteins [BR:
mme02035
]
Flagellar system
Flagellar assembly proteins
Others
Marme_3240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
MCM
AAA_2
HTH_30
AAA
MerR
HTH_28
FleQ
HTH_24
HTH_11
HTH_20
AAA_19
HTH_23
AAA_22
HTH_Tnp_1
ATPase
AAA_7
RsgA_GTPase
HTH_3
AAA_3
DUF2089
HTH_10
AAA_16
nSTAND3
Sigma70_r4_2
PDE8A_N
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
ADZ92456
UniProt:
F2K3L7
LinkDB
All DBs
Position
complement(3558003..3559355)
Genome browser
AA seq
450 aa
AA seq
DB search
MNKVKLLVVEDDRGLAEALEDTLLLAGYDCSMVGSSEEAILSLKKQSYDMVVSDINLPGM
DGYGLLKHVTDHYPELPIMLMTAYGDIAHAVEAMREGAVDYLLKPFEEAELLEVIQKHTA
GALDNKSSTLIAVDPSSKAMVDLAKRVAVTDSTVLICGESGTGKEVLANYIHTSSDRVNQ
PFVAINCAAIPENMLEAILFGYEKGAYTGAVSSQAGKFEQANGGSILLDEITEMDVGLQA
KLLRVLQEQEVERLGGKKPIKLDVRIIATTNRDLASYVKEGGFREDLYYRLNVFPLKWSP
IRERKGDIIPIAESLLKKHAVKMRLGEVVLMPSAQSKLESHRWPGNVRELDNVIQRALIL
CSGSSVEEQHVVFDMLSSEQVVEPESQLEENEDAASILGKGVQQHEFRIIAQALIEAKGK
RKDVAEKLGISPRTLRYKIAKMREFGLEVD
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagtgaagttgctcgtagtcgaagatgatcgagggttagcggaggcgctagaa
gacacgttactgctagcagggtacgattgcagtatggttggaagttccgaagaggcgatt
ttaagtctaaaaaaacagtcgtatgatatggttgtttccgatataaacttgccaggaatg
gatggctacggtctgttgaaacatgtcaccgatcattacccagagttgcctattatgtta
atgacggcttacggtgatattgctcatgctgttgaggcgatgcgcgagggagcggttgat
tatttgcttaagccgtttgaggaagcagagctgctagaagtcattcaaaagcataccgct
ggtgctttagataataaaagttctactctaatcgcagttgatccatcaagtaaagcaatg
gtcgatttagcaaagcgcgttgcagtaacggattctaccgtgcttatttgcggcgaaagt
gggacagggaaagaggtgcttgcaaattatattcatacctcgtctgatcgtgttaatcag
ccttttgttgcaatcaattgcgcggctatccctgaaaatatgctagaagcaatattgttt
gggtatgaaaagggcgcatatacgggagcagtaagctctcaggctggtaaatttgaacag
gcaaatggcggctcgattctgttagatgaaattacagaaatggatgttggccttcaagcg
aaattgcttcgggtattgcaggaacaggaagtcgagcgtctgggggggaagaagccgatt
aagcttgatgtgcgcattattgccaccacaaaccgcgatttagcaagttatgttaaggaa
ggcggctttcgggaggatttatattatcgtctcaatgtattccctttgaagtggtcgcct
atcagagagcgtaagggcgatattattccaattgccgagtctcttttaaagaaacatgca
gtcaaaatgagattgggggaggttgtattgatgccttccgctcaaagcaaattggaatcg
caccgttggcctggaaacgtgcgcgaattggataatgtaatacaaagagcgcttatattg
tgttcgggaagctcagtagaagagcagcatgtcgtatttgatatgttgagcagtgaacag
gtcgttgagccagagtcgcaattggaagagaatgaagatgctgcgtcgattcttggtaaa
ggtgttcagcagcatgagtttagaattattgctcaggcattaattgaagctaagggtaag
cgtaaggatgttgcggaaaaattgggcattagtccccgaacattacggtataagatagct
aaaatgcgtgaatttggtttagaagttgattga
DBGET
integrated database retrieval system
