Marinomonas mediterranea: Marme_3607
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Entry
Marme_3607 CDS
T01449
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mme
Marinomonas mediterranea
Pathway
mme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Marme_3607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mme03019
]
Marme_3607
Enzymes [BR:
mme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Marme_3607
Messenger RNA biogenesis [BR:
mme03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Marme_3607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ADZ92820
UniProt:
F2JV62
LinkDB
All DBs
Position
3981923..3983362
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AA seq
479 aa
AA seq
DB search
MLTGFKTLVRKATALFTSENSMELPLVIPKEEHSLSDSGISPNALKVLHRLNGAGFDAYL
VGGCIRDHLIGMSPKDFDVVTNATPEEVNDLFSNSRLIGRRFRIVHVTFGREIIEVSTFR
ANTANNPPPIPKHDENKSLKNKDTARSSHGIILRDNVWGSIDEDAQRRDFTFNALYFNIA
DRSIHDFCNGLQDIENKQIRIIGDPRERYKEDPVRMLRAIRFAGKLGFDIEPETAAPIKE
MAHLLDHIPPARLFEEVLKLLGSGQGVTTFYLLREYGLFKYLFPDTDAILNSGWKRKDIN
PERFIRQGLENTDRRIQDGKSTAPYFLYAIMLWPSVCLRHEEFESQGLPATPALHQAATM
VLDNQVASTAIPRRFSTPMREIWDLQFRLPKRYGKRALVLLQHPRFRAAFDFLLIRELSG
TQLDGLGAWWENFQHAPENQQRNLISEADPRKSDTADVKKRRPRRRRKSNAVKKQTPDS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgctgacaggttttaagactctggttcgtaaagcaactgcgctattcacatccgaaaac
tcaatggaattgcctttggtcatccctaaagaagaacattcgctatctgatagtggaatc
agtccaaacgcacttaaagtactccatcgattgaatggcgctgggtttgatgcctatctc
gttggcggctgcatacgagaccacctcatcggcatgagtccaaaagactttgatgtcgtc
actaacgcgacaccagaagaagtaaacgatctattttctaattcacgacttatcggccga
cgttttcgtattgttcacgtaacatttgggcgcgaaattattgaagtatcgacgtttaga
gcaaatactgcgaataatccgccgcccattcctaagcatgacgagaacaaatctctaaaa
aataaagacacagctcgctcatcacacggcattatcctacgcgataacgtttggggcagc
atagatgaagacgctcaacgtcgcgatttcacgtttaacgccctgtatttcaatatcgca
gaccgctcgattcatgatttctgtaacggtcttcaagatatagaaaacaaacaaattcgc
ataattggcgacccaagagagcgctacaaagaagaccccgtcaggatgcttcgcgcgatt
cgtttcgcaggaaagctaggattcgatatagaaccagaaaccgccgcccccattaaagag
atggcacatcttttggatcacattccgccagcacgcctgtttgaagaagtattgaaactc
ttaggcagcggacaaggtgttacgaccttctacttacttcgtgaatacggcctcttcaaa
tacctatttcccgatacagacgccatcctaaacagtggctggaagcgaaaagacattaat
ccagaacgctttatccgacaaggtcttgagaacacagaccgacgcattcaggatggcaag
agcacagctccatactttttatatgcgattatgctttggccaagtgtatgcctacgccat
gaagagtttgaatctcagggactacctgctacgccagcactgcatcaagccgcgaccatg
gtactcgacaatcaagtcgcgtccacagcaatccctcgtcggttctctactccaatgaga
gaaatttgggatttacaattccgcttgccaaaacgctacggtaagcgcgcgcttgtatta
ttacagcaccctagatttagagcagcctttgacttccttcttattagagagctaagcggc
acacaacttgatggactaggagcgtggtgggaaaacttccagcatgcgccagaaaaccaa
cagcgcaatctcatttcagaggcggacccacgaaaatctgacacggccgatgtcaaaaag
cgtcgcccaagaagacgccgcaaaagcaacgctgttaaaaagcaaaccccggacagttaa
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