Malurus melanocephalus (red-backed fairy wren): 130572458
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Entry
130572458 CDS
T09178
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
130572458
NCBI-ProteinID:
XP_057220152
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MAMLLFPVQLLAVAVTVYLELVRSAQGGAYYGIKQLPPQVPQYQPLGQQVPHMPLGKEGI
PMQHLGKEVPHMQYGKEYPHLPQYRKEIPQIPMLGKDMAPKKEKEIPMRSLRGEQGPPGE
PGPRGPPGPPGLPGHGVPGAKGKPGPQGYPGIGKPGLPGMPGKPGVMGPPGPRGEMGPKG
EIGPMGIPGPQGPPGPHGLPGIGKAGAPGLQGQPGPKGEPGMKGPPGIPGIPGPKGEKGV
GIPGLPGLKGPPGLPGPPGPVGLPGVGKPGMVGFPGPQGPIGKPGPPGELGLQGPPGAPG
IQGPPGPPGIGKPGQDGMPGQPGFPGGKGEQGQPGLPGPPGVPGVGKPGFPGPKGERGVS
GLPGPLGPKGEKGHAGPPGMGGPPGEPGQPGLPGIMGPPGAAGFPGPKGEGGAVGPPGPV
GPKGEPGLQGFPGKPGFPGEVGGPGLRGLPGPTGPKGEAGHKGLPGLPGVPGLVGPKGEP
GLPGAQGLQGPSGIPGIAGPSGPIGPPGLPGAKGEPGMPGPPGFPGVGKPGAAGLQGPPG
KPGALGPPGQPGLQGPPGPPGPPGPPVIIPPTPPAVGQYLPEVGPIDGVKPPYGYKGKKG
KAGGVVYEMPAFTAELLTPFPRVGVPVKFDKLLYNGRQNYNPQTGIFTCEIPGVYYFAYH
VHCKGANVWVALYKNNEPLMYTYDEYKKGFLDQASGSAVVPLMHGDKVYVQMPSEQAAGL
YAGQYVHSSFSGYLLYPM
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctgctcttccctgtgcagctgctggcagtggctgtcaccgtttacctggag
ctggtgaggtctgctcaaggtggtgcctactatgggatcaagcagctgccacctcaggtg
ccgcagtaccaacctctcggacaacaagtacctcacatgccactgggcaaggaaggcatc
ccgatgcagcacctgggcaaggaggtgccccacatgcaatatgggaaggagtacccccat
ctgcctcagtacaggaaggagatccckcagatacccatgcttggcaaggatatggctccc
aagaaagagaaagaaattcccatgcgcagtctgaggggtgagcaaggtcctcccggtgag
cctggaccaagagggccaccaggaccaccaggattaccaggtcatggtgtgccaggagcc
aaaggaaaaccaggcccgcaaggatacccaggaattggaaagccgggtttgccagggatg
ccaggaaaaccgggggtcatggggcccccggggccaagaggggagatggggccaaagggg
gagattgggcccatggggatacccggaccgcaaggaccaccagggcctcacgggcttccc
ggcatagggaaagcgggtgctccggggctgcagggacagccgggcccaaagggtgagcct
ggsatgaaggggccaccaggaatccctgggatcccagggccaaaaggggagaaaggcgtc
gggatcccgggtttgccgggtctgaagggtccacccgggctgcctggtccccctggcccc
gtggggctgccgggagtcggcaaaccgggcatggttggtttccctggcccacagggaccc
atcggcaagcccggacccccaggagagttagggctgcaggggcctccgggagcccccggg
atccaaggccctcctggcccgcctggcattggcaaaccrggccaggacggcatgccgggc
cagccgggcttcccggggggcaaaggggagcagggacagccgggcctgccggggccccct
ggcgtccctggggttgggaagccaggcttccccgggcccaaaggggagcggggygtgagt
ggtctgcctggccctctggggccaaagggggagaaggggcacgcgggaccccctggcatg
ggagggccaccaggggagccaggccagccgggactgccgggcatcatgggccccccgggg
gccgccggttttccaggacctaaaggagaggggggtgccgtagggccaccgggaccagtc
ggccccaagggagaacctggcctgcagggtttcccaggaaagccaggctttcctggggaa
gtgggtggccctgggctccgggggttgccgggccccacggggcccaagggggaagccgga
cacaaaggcttgccggggctgccgggtgtcccggggctcgtagggccaaagggcgagccc
gggctccccggtgcccaggggcttcagggcccctcgggcatcccgggcatcgcaggtccc
agcggtcccatcggcccccccgggctgccaggggctaagggtgagccaggcatgcccggc
ccgcccggcttccctggcgtgggcaaacccggtgctgccgggctgcagggtcccccggga
aagcccggggcgctcggtccycctggccagccgggtctccaagggccaccgggccccccc
gggcccccaggtcccccggtcatcatcccmcccactccaccagccgtgggacagtacctg
cccgaggtggggcccatagacggcgtgaagcctccctacggctacaagggcaagaaaggc
aaggccggcggcgtcgtctacgagatgcccgcgttcacggcagagctgctcacccccttc
ccccgcgtcggggtgcccgtgaagttcgacaagctcctgtacaacggccggcagaactac
aacccccagacggggatcttcacctgcgagatccccggcgtctactacttcgcctaccac
gtccactgtaaaggcgccaacgtgtgggtagcgctctacaagaacaacgagccgctcatg
tacacctacgacgagtacaagaaaggcttcctggaccaggcttcgggcagcgccgtggtg
ccgctgatgcacggagacaaggtttacgttcagatgccatccgagcaggcggcaggactc
tatgccgggcagtacgttcattcgtctttttcagggtatttattgtatcccatgtaa
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