Malurus melanocephalus (red-backed fairy wren): 130572563
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Entry
130572563 CDS
T09178
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmea03016
]
130572563 (TRMT13)
Enzymes [BR:
mmea01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
130572563 (TRMT13)
Transfer RNA biogenesis [BR:
mmea03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
130572563 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
130572563
NCBI-ProteinID:
XP_057220295
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MAARGXPGAAMAAPEPGRCAHFVLRKRRFCRMIPAPGRRFCGEHGYEEEQNDRKRIPCPL
DPKHTVYEDQLQKHLKKCNSREKPKPVYFVQDINAGLRDAAEIPEKQVPLSSLSTEELDN
LISKLKKASNGLKLHLQEQILSHQALQDALNDPKNGESAFKHLKQQASILGNMEKLHLLG
PGRCFVEFGAGRGKLSHWVDIALGNVENVQFLLVERATTRFKVDGKHKRRDSVFERLQVD
IQHLCLNKVPVLEKKKLPVVGIGKHLCGAATDLALRCLIESYTICCDRDHEEPAPKRSRA
AETEEVAPHNSAGNESTTEDHKPVAGIVIALCCHHKCDWTHYVGREFFKSVGLGPVEFHY
FQRMSSWATCGMRETTSKASTSEDSEDQTSDTEEHEQTXSRTESGSDTLQGILSVEERKE
IGCLCKRLIDHGRVEYLQQQGYKAELQYYTDSAVSLENVLLTAVPSPSLIPEPTI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggggcygccgggagcggcaatggcggcgccggagccggggcgctgcgct
cacttcgtgctgaggaaaaggcgcttctgcaggatgatcccsgcgcccggcaggcgcttc
tgcggagagcacggctacgaggaggaacaaaatgacagaaaaagaattccrtgccctctt
gatccaaaacacactgtatatgaagaccaactacaaaagcatttaaaaaaatgtaactca
agagagaaaccaaagcccgtctactttgttcaagatattaatgcaggtttaagagatgca
gcagaaataccagaaaaacaagttcctctatcttctctatctactgaagagctggacaac
ttaattagcaaattgaaaaaagcaagcaatggcctgaaacttcatcttcaggaacaaata
ctgtcccaccaggctttacaagacgccttgaatgacccaaagaatggggaatctgctttc
aaacatctgaaacagcaggcttctattttaggtaacatggaaaaattgcatttacttggt
ccaggaagatgctttgttgagtttggagctgggcgaggaaaactttcccattgggttgat
attgccctaggcaatgttgaaaatgtccagtttttgcttgtggaaagggcaaccacaaga
ttcaaggtggatggaaaacataaaaggagagattctgtatttgagaggcttcaagtagac
attcagcacttatgtttaaataaggtacctgttttggagaagaaaaaactacccgtggta
ggaattgggaagcatttgtgtggtgctgcaacagatcttgccttgagatgcttgattgaa
agttacaccatttgctgtgatagagaccatgaagagcctgcaccaaaacgctccagggct
gctgagacagaagaggtggctcctcacaattctgctggtaatgaaagcaccacagaagac
cataagcccgtagctggaattgttattgctctgtgttgccatcacaagtgtgactggaca
cattatgtaggcagagagttctttaaatcagtaggactgggaccagtagaatttcattat
tttcagagaatgagtagttgggccacytgtggcatgcgagaaaccacaagcaaagcttct
acaagtgaagacagtgaagatcaaactagtgacacagaagaacatgagcaaacackcagc
aggacagagagtggttcagatactttacaagggatactgagtgtagaggaacgaaaggag
atcggttgcctctgtaaacggctgattgatcatggacgggttgagtatttacaacaacaa
ggatacaaggctgaactacagtattacacagattctgctgtgtccttggagaatgtcctg
ttgacagctgtcccaagtccttctttgataccagagccaacgatatga
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