Malurus melanocephalus (red-backed fairy wren): 130572605
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Entry
130572605 CDS
T09178
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130572605 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmea03019
]
130572605 (HBS1L)
Messenger RNA biogenesis [BR:
mmea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130572605 (HBS1L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
Aq_aa27
GIP1_N
Motif
Other DBs
NCBI-GeneID:
130572605
NCBI-ProteinID:
XP_057220393
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATLVEPLEEEYG
YEGTDAAADCFTSTHQLTEVDRARLNSCLDQMREVLAESIPEQTMVQAVLDTKFDVQKAL
DLVLSQGSKQNVKTKNKDAGTLGKTTKGKTRDFQSARMESEIVPKITKMTVSGKKQSMGF
EVPCAVADENGHTNTPQKGLLLEDTNVGSGVLETVSKSTLSPQVVQVSEEQNMVPTPAKK
SSKAKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQ
ESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETPTKVITLMDAPGHKDFIPNMIT
GAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQER
FLEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRSQSSDLTQWYKGKCLLEQIDSF
KPPQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQAGERLLAMPPNETCTAKGITLH
DEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARVLIFNIEIPITKG
FPVLLHYQTVSEPATITRLLSVLHKSTGEVTKKKPKFLAKGQNALIELQTQRPVALELYK
DFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcacaggaacgtccgaggatataactacgacgaagactttgaagatgatgat
gtatatggccaatcggtagaagatgattattgcatttctccttcaacagcagctcaattt
atttactccagacgagacaaaccagccacacttgttgagccrttagaagaagaatatggc
tatgaaggtaccgatgctgctgctgattgttttacatccactcatcagttgactgaagtt
gatagagcccgtcttaattcatgccttgatcaaatgagagaagttttggcagagtccata
ccagaacaaacaatggtgcaagcagtactggatactaaatttgatgtacaaaaggctttg
gatcttgtgctttcacaaggcagtaagcaaaatgtgaagaccaagaataaggatgctggg
actttaggaaagactacaaaaggaaaaacaagggatttccagtcagccagaatggaatct
gaaattgtgccaaaaattaccaaaatgacagtgtctggaaagaaacaatctatgggattt
gaagttccatgtgcggttgctgatgaaaatggccatactaacacacctcagaaaggactg
ttacttgaagatacaaacgtaggttctggggtacttgagactgtctcaaaatctactctt
tcacctcaagtagtacaggtttcagaagagcagaatatggtgcctactccagcaaaaaag
tcaagcaaggcaaaaccacaaatagatgtgaaagcagagctggagaagagacaaggagga
aagcaactgctgaatctggttgtaatagggcatgttgatgcaggcaaaagtactttaatg
ggacatttgctctatcttttgggaaatgtgaacaaaagaactatgcacaaatatgaacag
gagtctaaaaaggctggtaaagcttcatttgcctatgcatgggtcttggatgaaactggt
gaagaaagagaaaggggagtgacaatggatgtgggaatgaccaaatttgagacaccgact
aaagtaattacactgatggatgctccaggccacaaagacttcattccaaatatgattaca
ggggctgcacaggctgatgtggcaattttggttgtggatgccagcagaggagagtttgag
gcaggatttgaracgggtggacaaactcgagaacatggattattagtgcgctctcttgga
gtgacacagctggctgttgcagtcaataaaatggaccaggtcaattggcaacaggaaaga
tttctcgaaattacaagtaagctcggccaatttcttaagcaagctggctttaaggaatca
gatgtggcatatatcccaacaagtggccttggtggggaaaatctagtcacaaggagtcag
tcaagtgacctcacacaatggtacaaaggaaagtgtttgctagagcaaattgattctttc
aagccaccacagagatcagtggataaaccatttagactgtgtgttgctgatgtttttaaa
gaccaaggatcaggattttgtgtgactggtaaaatagaagcaggctatattcaagctgga
gaacgacttctggcaatgcctcccaatgaaacttgcactgcaaaaggaatcacactgcac
gatgaaccagttgactgggctgcagcaggagatcacgttagtctcactttgaccggcatg
gatatcatcaaaatcaatgtgggctgtgtattttgtgatcccaaggaacccattaaagtt
tgcactcggttcagagctcgggttctcatcttcaatattgagattccaatcactaaggga
tttcctgtgcttttacactatcaaacagtaagtgaacctgctactattacaagactgttg
agtgtcctgcacaaaagcactggtgaagtgacaaagaaaaaacctaagtttttggctaaa
ggacagaatgccctaatagaactacaaactcaaagacctgttgctctagagttgtacaaa
gattttaaagagttggggagatttatgttacgctacagtggctccactattgctgcagga
gttgttacagagattaaagaatga
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integrated database retrieval system
