Malurus melanocephalus (red-backed fairy wren): 130572868
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Entry
130572868 CDS
T09178
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130572868 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmea03000
]
130572868 (ARID1B)
03021 Transcription machinery [BR:
mmea03021
]
130572868 (ARID1B)
03036 Chromosome and associated proteins [BR:
mmea03036
]
130572868 (ARID1B)
Transcription factors [BR:
mmea03000
]
Eukaryotic type
Helix-turn-helix
ARID
130572868 (ARID1B)
Transcription machinery [BR:
mmea03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130572868 (ARID1B)
Chromosome and associated proteins [BR:
mmea03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130572868 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
130572868
NCBI-ProteinID:
XP_057220846
LinkDB
All DBs
Position
Unknown
AA seq
2378 aa
AA seq
DB search
MIMAAQVAAAPAGANNSKGKAPSLPGGLGPERGPGGAGAPGPGPALGVGEGSPAGGSSVN
NLDHHLHHHHHRSEPPNMANNAAPAAAAGNNNNASGGGGGSSSEPALKEGGSSSALSSSS
SSSSSSSSSSSNPGSAMETGLLPNHKLKSVGGDHPAAPPHHHHAHHPHHHAHHHHAHHPH
HHHHALQQQLNQFPPPPPQQPPPQHHPVQNNNSSLGGGGGGSGSNNNGGGGGGAAQPSAD
MEQQQHGGKDSVLGAQAEPPQQPQQMLNKGTDEEEMPGKMGEPIGGRYDHPGLGPLGGQQ
QPQQPPPSAGSGGGGLGGGGGSGGGGGGPSAVGVSEFNSYYGNPAPAPASSATASRAGPC
FDQHGGQQSPGMGIMHPTAAPNSMDPLQNSHEGYPNSQYNHYPGYGRGPGGGGAGGGGGA
GAVAAAAAAAAGAGGGGGGYGSSAAGYGVLSSPRQPGGGMMMGPGGGAGLGKAGAGAAAA
AGGFARFSGQNQHPSGATPTLNQLLTSPSPMMRSYGSSYPDYSSPSAPPQPQPQAAAAAP
GSQQAAAGMGMGKDMGAQYGAANPAWAAAQQRNHPAMSPGNTGQAISRTQGSPMDPMVMK
RPQLYGMGNNPHSQAQQSSPYPGQSYGPPGPQRYPVGMQGRAPAAMGGMQYPQQQIPPQY
GQQGVSGYCQQGQQPYYNQQPQPQHLPPQAQYLSQAQQRYQAQQDMSQEGYGTRSQPPMA
PGKPNHEDLNLIQQERPSSLPVEVLASEDATFGHKDLSGSIDDLPTGTEATLSSAVSASG
STSSQGEQSNPAQSPFSPHASPHLSGIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQM
PPQPPGSQSESSSHPALSQSPMPQDRGFMAGIQRNPQMSQYGPQQTGPSMSPHPSPGGQV
HPGIGSFQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPNTSYSGPGPGMGINANSQMHG
QGPSQPCGTMPLGRMPSAGMQSRPFPGNMSSMTPNSPGMSQQGGPGMGPPMPTVNRKAQE
AAAAVMQAAANSAQSRQGNFPAMNQSGIMGSSSPYTQPMNNSSGLMNPQAPPYSMASNMV
NSSAGNAPMGLADMMTPGESKLPLPLKADGKEEGPPQPESKSKDSYSSQGISQPPTPGNL
PVPSPMSPSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPER
KMWVDRYLTFMEERGTPVASLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATTL
NVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKIQPPSPANSGSL
QGPQTPQSTGSNSMTEVPGDLKPPTPASTPHGQMTPMQGGRNSAVSVHDPFSDVSDSAFP
KRNSMTPNAPYQQGINMPDMMGRMPYEPNKDPFGGMRKVPGSNEPFMTPGQMPNSGIQDM
YNQSPSGAMSNMSMSQRQQFSYGSGYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGMYPQQ
QNYKRHMDGMYGPPAKRHEGDMYNMQYGNQQQEMYNQYSNAYTGPDRRPMQGQYPYPYNR
ERMQGPGQMQQHGIPPQMIGGPMQSSSSSEGPQQNMWPTRNDMPYPYQNRQGPGGPAQAP
PYPGMNRTDDMMVPDQRINHESQWPSHVNQRQPSYMSSSASMQPITRPPQSSYQTPPSMP
NHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVIPTVPVSQVTGPPPQPPPIRREIT
FPPGSVEASQPVLKPRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDST
VATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPGHKALDHKAAKKDDSQSLAED
TGKDENDECIDYFDEDEEEGEDEKVEGEEKSIVFSTPGAIADPSERPKQASKFDKLPIKI
VKKNNLFVVDRSDKLGRVQEFDSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRKAPPPLN
SPSKKKDLEGKGESEEQQEKSITATIDDVLSARPGALPEDSNSGSQTESSKFPFGIHQAK
SHRNIKLLEDEPRSRDETPLCTITHWQDSLAKRCICVSNIVRSLSFVPGNDTEMSKHPGL
VLILGKLILLHHEHPERKRAPQTYEKEEEEDKGVACSKDEWWWDCLEVLRDNTLVTLANI
SGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSI
QDNNVDLILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSNLAQGDTLAARAIAV
QKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDEN
RSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggccgcgcaagtcgcagcggctccggcgggtgcgaacaacagcaagggcaaa
gccccgagcctgccgggcggcctgggcccagagcgaggcccggggggggccggggctccc
gggccgggccccgcgctgggggtcggcgaggggagtccggccggcggcagcagcgtgaat
aatttagatcaccatctccaccaccaccaccaccgcagcgagccgccgaacatggccaat
aacgcggctcccgccgctgccgccggtaacaacaacaacgccagcggcggcggtggcggc
tcctcctcggagccggctctgaaggaaggtggaagctcctcggcgttatcttcatcttct
tcgtcttcttcctcctcctcctcctcctcctccaacccgggctcggctatggagacgggg
ctgctccccaaccacaagctgaagagcgtcggaggcgatcaccccgccgcgccgccccac
caccaycatgcccaccacccgcatcaccatgcccaccaccaccatgcccaccacccgcac
caccaccaccatgcactacagcagcagctaaatcaattcccgccgccgccgccgcagcag
ccgccgcctcagcaccatcccgtgcagaataacaacagcagcctcggcggcggcggcggc
ggcagcggcagcaacaacaacggcggtggcggtggcggcgctgctcagcccagtgcagac
atggagcagcagcaacatggaggaaaagacagtgttttgggcgctcaggccgagcccccc
cagcagccgcagcaaatgctgaataaaggcaccgacgaggaggagatgcccggcaagatg
ggcgagcccatcggcggccgctacgaccaccccggcttgggacccctgggcggacagcag
cagccccagcagccgcccccgagcgctgggagcggcggcggcggcctcggcggcggcggc
gggagcgggggaggcggcggcggcccctccgcggtgggtgtctcggagttcaatagctat
tatggcaaccctgcccctgcccctgccagcagcgctacggcgagccgcgccgggccttgc
tttgatcaacatggcggacaacaaagccccgggatggggataatgcaccccacggcggcc
cccaacagcatggaccccctgcagaactcccacgaagggtaccccaacagccagtacaac
cactacccgggctacggccgcggccccggcggcggcggcgcgggcggcggcggcggcgcg
ggagccgtggcggcggcggcggcggcggccgctggggcaggcggcggcggcggcggctac
gggagctccgcggcgggctacggggtgctgagctccccacggcagcccggcggcggcatg
atgatgggccccggcggcggagccggcctcggcaaggctggtgccggtgcggcggcggcg
gccggcggctttgcgcggttctccgggcagaaccagcacccgtccggggccacccctacc
ttgaaccagctgctcacgtcccccagccccatgatgcggagctacggcagcagctacccc
gactacagcagccccagcgccccgccgcagccccagccccaggcagcggcggccgccccg
ggaagccagcaggcagcggcgggcatgggcatgggcaaggacatgggcgcccagtacgga
gcggcgaacccggcctgggcagcggcacaacaaaggaaccacccggcgatgagccccggg
aacaccgggcaggccatcagcaggacccagggcagtccgatggatccgatggtgatgaag
aggccgcagctgtacggcatgggcaataaccctcactctcaggcacagcagagcagcccc
taccccgggcagtcctacggccctcccggcccccagcgctatcccgtgggaatgcagggc
cgagccccggcagccatgggaggaatgcagtatccacagcaacagatcccacctcagtat
ggtcagcaaggtgtaagtggctactgccagcagggccagcagccgtactacaaccagcag
ccgcagccccagcacctcccaccccaggcacartatctgtcgcaggcccagcagaggtac
caggctcagcaggacatgtctcaggaaggctatggaaccagatctcaaccccctatggcc
ccaggaaagcctaaccatgaagacttgaatctaatccagcaagaaagaccatcaagctta
ccagttgaagtcttggcctccgaggatgctacatttggacacaaggatttatctggatcc
attgacgacttgccgactggaactgaagcaaccctcagctcagctgttagtgcatcaggc
tctacaagcagccaaggggagcagagcaaccctgcacaatctccgttttcccctcatgct
tctccacatctctctggcatccctgggggcccatcgccttcccctgtaggctcacccgtt
ggaagcaaccagtcaagatctggtcccatttctccagcgagtattccaggcagtcagatg
ccaccgcagcctcctggcagccagtcagaatccagctcccaccctgccttgagccagtca
ccaatgccacaggaccgaggttttatggcaggcatacagaggaacccccaaatgtcacag
tatggacctcaacaaactggaccttccatgtcaccacacccctcacctggaggtcaagtg
catcctggaattggtagctttcagcagagtaattcaagtggtacttatgggcctcagatg
agccagtatggaccacaaggaaactactccagrccaccgacgtacagcggtgtgcccaac
acaagttacagtggcccaggacccggcatgggcataaatgccaacagtcagatgcacgga
caggggccaagccagccttgtggtaccatgcccctgggacggatgccatcagctgggatg
cagagcagaccatttcctggaaacatgagcagtatgacccccaattctcctggcatgtct
cagcagggaggccctgggatgggcccacccatgccaactgtgaaccgtaaggcacaggag
gcggctgctgcagtgatgcaggctgctgccaactccgctcagagcaggcaaggcaatttt
cctgccatgaatcagagcggcattatgggatccagctccccctacactcagccgatgaac
aacagctctggcctgatgaacccrcaggctcctccttacagcatggcttctaacatggtg
aacagttcagcaggtaatgcacctatgggtcttgcagatatgatgacacctggtgagtcc
aaactaccccttcctctcaaagcagatggcaaagaagaaggacccccccagcctgagagc
aagtcaaaggatagctacagctctcagggtatttctcagcccccaaccccaggcaacctg
ccagtcccttccccaatgtccccaagctctgctagcatctcctcatttcatggagatgaa
agtgatagcattagcagcccaggctggccaaagactccatcaagccctaaatcaagttcc
tctaccacgactggagagaagatcactaaagtctacgagctgggaaatgagccagagcgc
aagatgtgggtggatcggtacctgacattcatggaggagaggggcacgcctgtggccagt
ctgccagctgtgggcaagaagcccttggacctgttcaggctctatgtctgtgtcaaagag
attggaggtttagcacaggttaataaaaacaagaagtggcgtgagctggcaactaccttg
aatgttggcacttcgagcagcgcagccagctccctgaaaaaacaatacattcagtacctg
tttgccttcgagtgcaagattgagcgaggggaggagccccctccagaagtcttcagcact
ggagataccaagaaacaacctaagattcagccgccatctcctgctaattctggttccttg
caaggcccacagactccacagtccactggtagtaattccatgactgaagtgccaggcgat
ttgaagcccccaacaccagcatccacacctcatggacagatgacacctatgcagggtggc
agaaacagcgcagtcagtgtgcatgatcccttttctgatgtaagtgattcagcattccca
aagcgaaactccatgacgccaaatgcaccataccagcagggaataaacatgccagatatg
atgggaaggatgccatatgagccgaataaagatcctttcggtggaatgagaaaagtgcct
ggaagcaatgagcctttcatgacccctggacaaatgcctaacagtggaatacaagatatg
tataaccagagtccatctggagcaatgtccaacatgagcatgagccagcgacagcagttc
tcttatggaagtggctatgacaggaggcatgaaccatatgggcagcagtatccaggacaa
ggacctccctcaggacaaccaccatatggaggacatcaacctggaatgtatccacagcag
cagaactacaagagacacatggatggcatgtatgggcctccagccaaacgccacgaaggg
gatatgtataacatgcagtatggcaaccagcagcaggaaatgtataaccagtacagcaac
gcttacacagggcctgacaggaggcccatgcagggacagtatccgtatccatataacagg
gagaggatgcagggcccaggacaaatgcagcagcatggaatacctccccagatgattggt
ggccccatgcagtcgtcatcctccagtgaaggtcctcagcagaacatgtggccaacgcgc
aatgatatgccttacccttaccagaacaggcaaggtccaggaggccctgcacaggcccct
ccatatccagggatgaatcgcactgatgatatgatggtacctgaccagaggataaaccac
gagagtcagtggccttctcatgtcaaccaacggcagccttcttacatgtcatcctcagcc
tccatgcagcctatcactagacctcctcagtcatcctaccagacgccaccctctatgcca
aaccacatctctagagctccgagtccggcatccttccagcgctccttggaaaaccgtatg
tctccaagcaagtctcctttcctaccctccatgaagatgcagaaggttatacccacagtt
ccggtgtcacaggtcacagggcctccaccccaaccaccaccrattaggcgagagatcacc
ttccccccgggctctgtagaagcatcccaaccagtcttaaaaccaagacgaaagattacc
tcaaaagatattgtaactcctgaggcctggagagtgatgatgtctcttaaatctggtctt
ttggctgaaagtacctgggcgctagacactattaatattcttctgtatgatgacagcact
gttgctactttcaacctctctcagttgtctggatttcttgagcttttagtagaatatttt
agaaaatgcctgattgacatttttggaatccttatggaatatgaagtgggagatccaggc
cacaaagcacttgatcacaaagcagccaagaaagatgatagtcagtccctggcagaggat
actggaaaagatgagaatgacgaatgtattgactattttgatgaagatgaggaggagggg
gaggatgaaaaggtagaaggagaagaaaagagcattgttttttccactcctggtgccatt
gctgatccaagtgagaggccaaaacaagccagtaagtttgacaagctgccaataaagatt
gtaaagaaaaataatctattcgttgttgaccgatctgacaagcttggacgcgttcaggaa
tttgatagtggacttctccactggcagcttggtggtggtgatacaactgagcatatccag
actcactttgaaagcaagatggagattccaccacgcagaaaagcccctcctcccttgaac
tctccaagcaaaaagaaggacctcgaggggaaaggtgaatctgaggagcaacaagaaaag
agcataacagcaaccattgatgatgtcctctcagctcggccaggagcattacctgaagac
tcaaactctggttcccaaacagagagcagtaaatttccctttgggatccatcaagccaaa
agccaccggaatattaaactgctagaggatgagccaaggagccgggatgagactcctcta
tgcaccataactcactggcaagactccttggccaaacgctgcatctgtgtgtcaaatatc
gtccgtagcttgtcttttgtgcctggcaatgacaccgaaatgtccaaacatccaggcttg
gtgctgatcctgggaaagttgatccttcttcaccacgagcatccagaaagaaagcgagcg
ccgcagacttacgagaaagaggaagaggaggacaaaggggtggcctgcagcaaggatgag
tggtggtgggactgcctcgaggtcttgagggataatacattggtcacattagccaacatt
tctgggcagctagacttgtctgcttacacagaaagcatctgtttgccaattttggatggc
ttgctgcactggatggtgtgcccgtctgcagaggcacaggatccttttccaaccgtgggg
cccaactcagttctttcgcctcagagacttgtgctggagaccctgtgtaagctcagtatc
caggacaataatgtggaccttatcttggccacccccccattcagccgtcaggagaaactc
tacgctactttagttaggtacgttggggaccgcaaaaacccggtctgccgagaaatgtcc
atggcgctcctatcgaaccttgcccagggggacacattagcagcaagggcaatagctgtg
cagaagggaagcatcggaaacttgataagcttcctggaggatggggtcactatggcccag
taccagcagagccagcataacctcatgcacatgcagcctccgcctctggagccgcctagc
gtagacatgatgtgcagggcagccaaggccttgctggccatggcgagagtggacgagaac
cgctccgagttccttttgcacgagggtcgtttgctggatatctcaatatctgctgtcctg
aactctctggttgcatctgtcatctgtgatgtactttttcagattgggcagttatga
DBGET
integrated database retrieval system
