Malurus melanocephalus (red-backed fairy wren): 130572900
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Entry
130572900 CDS
T09178
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03013
Nucleocytoplasmic transport
mmea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130572900 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
130572900 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmea03019
]
130572900 (THOC1)
03041 Spliceosome [BR:
mmea03041
]
130572900 (THOC1)
Messenger RNA biogenesis [BR:
mmea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
130572900 (THOC1)
Spliceosome [BR:
mmea03041
]
Complex C
Other components
EJC/TREX
130572900 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
130572900 (THOC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
130572900
NCBI-ProteinID:
XP_057220902
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MSPPLFSLPEARLRFTTSTREALINKSIKPLLNAFNQVPGSENEKKCTLDQAFRVVVEEE
IINKAPCENLLAIISLAINGVTEGICTASTPFVLLGDVLDCLPLDQCDKIFTFVEKNVAT
WKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFN
LENVTVFNTNEHESTLGQKHTEEREEGMDVEEGEMGDDEAPTSCSIPIDYNLYRKFWSLQ
DYFRNPVQCYEKVSWKTFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFAKFL
TSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKAVYQ
LLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERSHPEFQLGPPDSKPMRPVR
KRPAPEDFLGKGSSKKILMGNEELTRLWNLCPDNMEACKSESREYMPTLEEFFEEAIEQA
DPENMVENKYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELP
PPSEEIKTGEDEDEEDNDALLKENNESPEVQRDKAMTGEQIESFANRLGEQWKALAPYLE
MKESDIRQIELDSEDVKMRAKQLLVAWQDQEGTHATPENLIMALNKAGLGDLAESLTNDT
EGSS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgccgctcttcagcctgcccgaggcgcggctccgcttcacgacatctaccaga
gaggccctgattaacaaaagcatcaagccgttgctgaatgcatttaaccaggttcctggg
agtgaaaatgaaaagaagtgcaccttggatcaagcttttagagttgttgtggaagaagaa
ataataaacaaagctccatgtgaaaatctsctggcaatcatttctcttgctattaatgga
gtcacagaaggtatctgcactgcatcaactccatttgtgcttttgggggatgttctggat
tgcctccctttggatcagtgtgacaaaattttcacttttgtggagaaaaatgttgctaca
tggaaatcgaatacattttactctgcagggaaaaattacttgctacgcatgtgcaatgac
ctcttaagaagattatctaagtcrcaaaacacggtcttttgtggaagaattcaactgttc
ttggctaggttatttccgctttcagaaaagtcagggcttaacttgcagagccaatttaac
ctggaaaatgtcactgttttcaataccaatgaacatgaaagcactctgggacagaagcac
acagaggagagggaagaaggaatggatgtagaagaaggtgaaatgggagatgatgaagca
ccaacaagttgttccattccaatagattataacctgtatagaaaattctggtcgcttcaa
gattattttagaaatcctgtgcagtgctatgagaaggtgtcatggaaaacttttctaaag
tactcagaagaagttttggctgttttcaaaagttacaaattggacgacactcaggcttca
cgaaaaaagttggaagaactaaaaacaggaggagarcatgtatattttgcaaagttccta
actagtgaaaagctgatggatttacagctgagtgacagtaactttcgccgtcacatcttg
ttgcagtacctaatactatttcagtatctaaagggacaagtcaaatttaaaagttcaaat
tatgttctaacagatgaacagtctctttggattgaagatactacaaaagcagtttaccag
cttctttcagaaaatcctcccgatggggaaagattctcaaaaatggtagagcatatatta
aatactgaagaaaactggaactcatggaaaaatgagggctgcccaagctttgtgaaagaa
agatctcatccagagtttcagcttggacctcctgattctaagccaatgaggcctgtgaga
aagaggccagctccagaggacttcttaggaaaaggatcaagcaaaaaaatccttatgggg
aatgaggaactgactcgcctttggaatttatgtcctgataacatggaagcctgtaaatct
gagagyagggaatatatgccaacattggaggaattttttgaagaagctattgaacaagca
gaccctgaaaacatggttgaaaataagtataaggctgtgaacaattctaactatggctgg
agagcactgagacttctggcacgcagaagtccccacttcttccagccaacaaaccaacaa
ttcaagagtttacctgaatatctagaaaacatggtaatcaaattagccaaggagctgcct
cctccttctgaagaaataaaaacaggtgaagatgaagatgaggaagataatgatgcttta
ttaaaggaaaacaatgaaagtccagaggtgcaacgggacaaagccatgacaggagagcag
atcgagtcctttgcaaacaggctgggggagcagtggaaggccttggccccctacttggag
atgaaggagtctgatatccggcagattgagctggacagcgaggacgtgaagatgagagca
aagcagctgctggtggcctggcaggatcaagagggcacacacgccacccccgagaacctg
atcatggcactgaacaaagctgggcttggggacctggcygaaagcctcaccaatgacacc
gaaggcagcagctaa
DBGET
integrated database retrieval system
