Malurus melanocephalus (red-backed fairy wren): 130573098
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Entry
130573098 CDS
T09178
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmea03019
]
130573098 (HTT)
04131 Membrane trafficking [BR:
mmea04131
]
130573098 (HTT)
03029 Mitochondrial biogenesis [BR:
mmea03029
]
130573098 (HTT)
Messenger RNA biogenesis [BR:
mmea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130573098 (HTT)
Membrane trafficking [BR:
mmea04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130573098 (HTT)
Mitochondrial biogenesis [BR:
mmea03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
130573098 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
HEAT_EF3_N
Rad26-like_helical_rpts
DUF7692
Motif
Other DBs
NCBI-GeneID:
130573098
NCBI-ProteinID:
XP_057221266
LinkDB
All DBs
Position
Unknown
AA seq
3092 aa
AA seq
DB search
MATMEKLTKAFESLRSFQQQQGPASLPEEPLQRPKKELAATKKDRVNHCLTICENIVAQS
LRNSPEFQKLLGIAMELFLLCSEDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEI
KKNGASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPK
IMAAFGNFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYAWLLNV
LLGLLVPVEDDHPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPEQL
IQVYELTLHYTQHQDHNVVTGALELLQQLFRTPPPELLHALTASGGIAQVSVAKDEPASR
SRSGSIVELIAGGGSSCSPVLARKHKGKVLLGEEESLDDDSETRSDVSAASFAASVKGEI
SSELASSSGVSTAGSAADPTGHDIITEQPRSQHTLQSDSVDLASCDLTSTATEGEDDEML
SRSSSQISAVQSDATMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLEGAEGQY
SGMQIGQLQDEEDEAANILQDDSSESFRNSSIALQQPHLLKTMSHSRQPSDSSVDRFTSK
EDAADAGDHENKPSRVKGDIGHYTDRDCAPLVHCVRLLSASFLLTGDKGALVPDRDVRVS
VKALAVSCVGAAVALHPESFFSKLYKTPLEAMGEEYEEQYVSDILNYIDHGDPQIRGATA
ILCGTIVNSILIKSRFDVEKWLINVRSSTGNLFSLIDCIPLLQKTLKDESSVTCKLACTA
VRHCIMSLCSSSYSELGLQLIVDLLTLKNSSYWLVRTELLETLAEVDFRLVSFLEAKTES
LHRGIHHYTGLLKLQERVLENVVISLLGDEDPRVRHVAAASLMRLVPKLFYNCDQGQADP
VVAVARDQSSVYLKLLMHETQPPSHFAVSTITRTYRGYNMLQSPTDVTMENNLSRVIAAI
SHALTISTTRALTFGCCEALCLLSTTFPVCTWSVGWHCGVSQPSSSDEAQKGCTIGMAGL
VLSLLSSAWFPLDLSAHQDALILTGNLLAASAPKCLKNPWSAEEDSNQGAAKQEEPWPAL
ADRTLVTLVEQLFSHLLKVINICAHVMDDVAPGPAVKAALPSLTNPPSLSPIRRKGKERE
PVEQASVPMSPKKSGEASPASRQTDATGPVPTSKSSSVGSFYHLPSYLKLYDVLKATHAN
YKVTLDLQNTNEKFGCFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFNREPTMAT
VCVQQLLKTLFGTNLASQYDGLSSNPSKAQGKAQRLGSSNLRPGLYHYCFMAPYTHFTQA
LADASLRNMVQAEQEHDASGWFDVLQKVSTQLKTNISSAAKHRADKNAIHNHIRLFEPLV
IKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRE
SEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDL
FVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQ
IADIILPMLAKQQMHIDSHDALGVLNTLFEILAPSSLRPVDMLLRSMFVTPKTMASVSTV
QLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLISCQAINRLRCGENSVSTPEDRSE
VKQAKYPPEETFSRFLLQLVGILLEDIVTKQLKVDMNEQQHTFYCQELGTLLMCLIHIFK
SGMFRRITAAATRLFTGDGSDGSFYTLESLSDLVQSMIPTHPSLVLLWCQILLLVNYTNY
NWWSEVHQTPKRHSLSTTKLLSPHISADSDESDLESKRGMCNREIVRRGALILFCDYVCQ
NLHDSEHLTWLIVNHVQDLINLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLAAPT
TLKKTLQCLEGIHLSQSGAVLTLYVDKLLCTPFRVLARMVDTLACRRVEMLLAATLQNSI
AQLPVEELDRIQEYLQNSGLAARHQRLYSLLDRFRLMVAPDTXSPSPLVTSHPLDGEDQP
ALENVILDKDWYVSLVRSQCYIKSDSALLEGAELVNRIPQPDLNSFMTSKEFNLSLLAPC
LSLGMNEISRDQKSSLFETARRVTLDHVSSAVQNLPANHQVFQPLLPPEPSAYWKKLXDI
FGDEVMYQSMMTLCRALAQYLLLLSKLPAGLRVPPDKEDDVLKFVVMSVEALSWHLVHDQ
IPLSVDLQAGLDCCCLTLQQPSLWNLLSSAAHVTYACSLINCIRFIIEAVAVEPGNQLLS
PERKKNTSKPLSEGEVDSNVQKTKHVIAACEMIAEMVECLQTVLSLGHKRNSSIPAFLTP
VLRNIIISLARLPLVNSYTRVPPLVWKLGWSPKPLGDFGTVFPEIPVEFLQEKEIFKEFI
YRINTLGWISRTQFEETWATLLGVLVTQPIVMDQEENQQEEDTERTQINVLAVQAITSLV
LSAMTIPVAGNPAVSCLEQQPRNKALKALDTRFGRKLSVIRGIVEQEIQAMVSKRDNIAT
HHLYQAWDPVPSLSPATTGALISHEKLLLQINTEREIGDMDYKLGQVSIHSIWLGNNITP
LREEEWGEDEEDENDVPAPSSPPTSPINTRKHRAGVDIHSCSQFLLELYSQWILPSNPSK
RTPVILISEVVRSLLAVSDLFTERNQFEMMYTTLTELRKVHPSEDEILVQYLVPAICKAA
AVLGMDKAVAEPVSRLLESTLRSTHMPSRIGALHGILYILECDLLDETAKQLIPIISEYL
LSNLRGVAHCVNIHNQQHILVMCAAAFYLIENYPLDVGPEFSAGIIQMCGVMVSGSDEST
PSIIYHCVLRGLERLLLSEQLSRLDSESLVKLSVDRVNVQSPHRAMAALGLMLTCMYTGK
EKISPSRITDANPGAPDSESVIVAMERVSVLFDRIRKGFPFEARVVARILPQFLDDFFPP
QDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRTPVA
MAMWSLSCFFVSASTSQWISAILPHIISRMGKSEQVDVNIFCLVAIDFYRHQIDEELDRR
AFQSVFEVVASPGTPYHRLLTCLQNVHKVTAC
NT seq
9279 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaagctgacgaaggccttcgagtcgctgcgctccttccagcagcag
cagggcccggcttccctccccgaggagccgctccagagaccaaagaaagaacttgcagct
accaagaaagatcgggtgaatcattgtctaacaatatgtgaaaacatagttgctcagtca
ctaagaaattccccagaatttcagaagctgctgggcattgctatggaactctttctcctg
tgcagtgaggatgcagaatctgatgtccggatggttgcggatgaatgccttaataaagtt
attaaagctttgatggattccaatcttcccaggttacagttagagctgtataaagagatt
aaaaagaatggtgcttcaagaagtctacgtgctgctctctggagatttgctgagcttgcc
catctagttcggcctcaaaagtgcaggccctacttagtgaaccttttgccctgtctaaca
cggataagtaagagacccgaggaatcggtacaagagacactggctgcrgcaataccgaaa
atcatggcagcgttcggcaattttgcaaatgacaatgagattaaggttttgttgaaggct
ttcatagctaatcttaaatccagttcycccactatccgtcggacggcagcaggatcagca
gtcagcatctgtcagcattcgcgaagaacacagtatttttatgcctggttattgaatgta
cttttaggcttgttggttcctgtagaagatgatcatcctactcttttaattcttggtgtt
ttrcttacactaaggtatctcatacctttattacaacaacaagtaaaagacaccagcctg
aaaggcagttttggtgtaacaaggaaagaaacagagatttcaccttcaccagaacaactt
atacaggtttatgaactgactctgcactacacccagcatcaggaccataatgttgtgact
ggagctttagaattgctacagcagctctttagaacgccccccccagaactgctccatgcc
ctgactgcctccgggggcattgctcaggtcagtgtagccaaagatgaacctgccagcagg
agccgcagtgggagcatagtggaacttatagctggaggggggtcttcatgcagccctgtt
cttgcaagaaagcataaaggtaaagtacttcttggtgaagaagaaagcttggatgatgat
tctgaaactcgatctgatgtcagtgctgcatcatttgcagcttctgtgaagggtgagatc
agcagtgaactggcttcttcctcaggtgtgtcaacagctgggtcagctgctgaccccacg
ggacacgacatcatcacggagcagccgcgttcccagcacacgctgcagtcggactctgtg
gatctggcaagctgtgatttgacaagtacagctactgaaggggaggatgatgaaatgcty
agtcgaagctccagccagatcagtgctgtccagtcagatgccactatggatttgaatgat
ggtacacaggcttcctcwccaattagtgatagctctcagactactacagaaggtccagac
tctgctgtaaccccttcagacagctctgaaattgttttggaaggtgctgaaggacagtat
tctggaatgcaaattgggcagctacaagatgaggaagatgaagctgcaaatattctccaa
gatgattcatcagaatctttcaggaattcttctattgctcttcagcagcctcacctattg
aaaaccatgagccatagcaggcagccctctgatagcagtgtggatcgatttacatcaaaa
gaagatgcagcagatgctggtgaccatgaaaacaagccctccagggtaaagggagacatc
gggcactacactgacagagactgtgctcctttggtgcactgtgtcaggctgctgtcagct
tccttcctgcttactggggacaaaggagctttagttcctgatagggatgtgagagtgagt
gtaaaagccttggcagtaagttgtgttggagcagccgttgcacttcaccctgagtctttc
ttcagcaaactgtataaaacacccctggaggcaatgggagaagagtatgaggagcaatat
gtatcggacatcctgaactacattgaccatggagatccccagattagaggagctactgcc
attttgtgtggaacaattgtcaattccattctaattaagtcccgctttgatgtggaaaag
tggttaataaatgtcagaagctcaacagggaatctcttttcgttgatagactgcatacct
ctgttacagaaaacrttgaaagatgagtcctctgttacttgcaaactggcttgtacagca
gtaaggcattgcatcatgagcttatgcagcagcagttacagtgaactaggtttgcagttg
attgttgacctccttactytgaagaacagctcatattggcttgtaaggacagaacttctg
gaaacacttgcagaggtagattttcggctagtcagctttttggaagcaaaaactgagagc
ttgcacagaggtattcatcattatactggtctgttraaacttcaggagagggtgcttgaa
aatgtggtaataagtctgcttggagatgaagatccaagagtgagacaygtggctgcagct
tcattaatgaggcttgttccaaagctattttataactgtgatcaaggacaggctgaccca
gttgtggcagtagcmcgagaccaaagcagtgtctacctgaaactcctcatgcatgaaacg
cagcccccatcrcactttgcagtgagcactatcactagaacataccgaggttacaatatg
ctgcaaagtccaacagatgtcactatggaaaacaacctctcaagggttattgcagcaatt
tcccatgcattgacaatatccactacaagagcacttacgtttggctgctgtgaagctttg
tgtcttctctccacaacatttccagtctgcacctggagtgtgggatggcactgtggtgtt
tcccagccaagttcttcagatgaagctcagaagggctgcaccattggtatggctggcttg
gtcctgtctctcctttcatcagcgtggttcccactggacctctcagcacatcaggatgct
ttgattttgactggaaacttgcttgcagcaagtgctcccaagtgcttaaagaatccctgg
agtgctgaagaagattcaaaccaaggtgctgcaaagcaggaagaaccctggccagctctg
gcagataggactcttgtcactttagtagaacagctcttttctcatctgctgaaggtcatt
aatatttgtgcacatgtgatggatgatgttgctcctggtccagcagtaaaggcagcatta
ccttctctcacaaacccaccttctcttagtccgattcggagaaaagggaaagagagggag
cctgtggaacaggcatctgtgccaatgagccctaaaaagagtggtgaagcaagtccagct
tctaggcaaactgatgctacagggcctgttccaacaagtaaatcatcttcagtaggaagc
ttttatcatcttccatcatacctgaagttatatgatgtcttgaaagcaacccatgctaat
tataaggttactttggatctccagaacactaatgagaagtttggatgtttcttacggtct
gccttagatgttctgtctcaaatcttggaacttgctactcttcaggacattggaaagtgt
gtagaagaaatcttgggatatctaaaatcatgtttcaacagagaaccaacaatggcaaca
gtgtgtgtacaacagttaytgaaaacattgtttgggacaaacctggcttctcagtacgat
ggcttgtcttcaaaccccagcaaagctcaaggcaaagctcagcgtttgggttcctccaat
ctgaggcctgggctctaccactattgcttcatggcaccctacacacacttcacccaggcc
cttgctgatgccagtctcaggaacatggtccaggctgagcaggagcatgatgcttcagga
tggtttgatgtgctgcagaaagtttctacacagctgaaaactaacatttccagtgcagca
aaacatcgtgctgataagaatgctattcacaatcacattcgtttatttgaaccccttgtc
ataaaagcactgaaacaatacacaacaacaacgtcggtacagctgcagagacaagttcta
gacttgcttgctcaactggttcaactgcgagttaactactgtcttctggattcagatcag
gtgtttattggatttgtactaaagcagtttgaatacattgaagtaggacagttcagagag
tctgaagcaattattcctaatatcttctttttcctggtgttgctgtcttatgagcggtat
cattccaaacagataattggaattcccaagatcattcagctgtgtgatggtatcatggcc
agtgggaggaaagctgttacacatgcaataccagctctgcagcccatcgttcatgatcty
tttgtgttaagaggaacaaataaagctgatgctggaaaagagctggaaactcagaaggag
gttgtagtgtcaatgctgctgagacttatccagtaccatcaggtgctagaaatgttcatc
ttagtattacaacagtgtcataaagaaaatgaagacaaatggaagagattgtcccggcaa
atagctgatatcattctcccaatgcttgccaaacaacagatgcatatagactctcatgat
gctctgggagtattgaacactttgtttgaaattttggctccttcatcccttcgtcctgtg
gacatgcttttaaggagtatgtttgttactcctaaaacaatggcatcagtgagcactgtc
cagctgtggatttccggaattctagctatccttagggttctgatttcacagtcaacagaa
gacatcgttctatctcgtatacaggagctttccttctcaccatatttgatttcatgtcaa
gcaatcaacagactgagatgtggagaaaacagtgtgtccaccccggaggatcgcagtgaa
gtcaaacaggcaaaatatccacctgaggagacattttccaggttcttactacagcttgtt
ggcattctacttgaagatattgttaccaagcaattaaaagtggatatgaatgagcagcaa
catactttctactgccaggagctgggcacactgcttatgtgcttaatacatatcttcaaa
tcagggatgtttagaagaatcacagctgcagccaccagactttttactggagatggatct
gatggtagtttctacacccttgaaagtctgagtgaccttgttcagtccatgattcccact
catccttctttagttctcctctggtgtcaaatcctgcttcttgtcaattataccaactac
aactggtggtcagaagtgcatcagaccccaaagcgacacagcctttctactactaaattg
cttagccctcatatatctgcagacagtgatgaatcagatttggaatctaagcgtggcatg
tgcaatcgtgagatagtgagaagaggagcactcattctcttttgtgactatgtttgtcaa
aacctacatgattcagaacacctcacctggcttattgtgaatcatgttcaagacttgatt
aacctgtcccatgagcctccagtacaagactttatcagtgctgttcacagaaattcagca
gccagtggtctcttcatccaagccattcagtcacggtgtgagaatcttgcagctcccaca
accctgaagaagaccttacagtgcttggagggaatccacctgagccagtctggggcagtg
ctgaccctstatgtggacaagctgctgtgcactcccttccgagtgctggctcgcatggtt
gacaccctggcttgtcgccgggtggagatgctgctggcagcaactcttcagaacagcatt
gctcagttaccagttgaagaactggatagaattcaggagtaccttcaaaacagtggatta
gcagcaagacaccaaagactttactcgctcttggatagatttcgtcttatggtagcacca
gacacaascagtccttcacctctggttacctcacacccactagatggagaagaccaacca
gctttagagaatgtgattctagacaaagactggtatgtgtcactagtgcggtcacagtgt
tacatcaagtctgactcagcactgctagaaggagcagagctggtaaacaggattcctcag
cctgacctgaactccttcatgaccagcaaggaattcaacctaagcttgttagcaccttgt
ttaagccttggcatgaatgagatctcaagggaccagaagagcagcctctttgaaacagct
cggagggtaactctggatcacgtgtcctctgctgtacaaaaccttccagccaaccaccag
gtttttcarccactcttgccacctgagccatcagcctactggaaaaaactaarcgatatc
tttggagatgaggtgatgtatcagtctatgatgacactttgtcgtgcactggctcagtat
ttgttgttactgtcaaaactaccagctggtcttcgtgttcctcctgacaaagaggatgat
gtcctgaaattcgtagtgatgtcagtagaggcactatcatggcatttagtgcatgaccag
attccgttaagtgtagatcttcaagctggtctggattgttgctgtctgacactacagcag
cctagtctgtggaatttactgtcttctgcagctcatgtgacatatgcttgctctttaatt
aactgcattagattcatcatagaagcagttgctgtggaacctggtaatcaacttcttagt
cccgaaagaaagaagaatacttcaaaacctttgagcgagggagaagttgattcaaatgta
cagaaaacaaaacacgttattgcagcttgtgaaatgatagctgagatggtggaatgctta
cagaccgtcttgtctctggggcacaaaaggaacagcagcatccccgcatttctcactcct
gtcctcagaaacatcatcatcagyttagcaaggctgcctctagtgaacagttacacaaga
gtacctcccttggtctggaaattaggctggtcaccaaagcctttaggtgactttggcaca
gtttttcctgaaatcccagtagaatttcttcaagaaaaggaaatcttcaaggarttcatc
tatcgcattaatacacttggatggatcagccggactcagtttgaagagacttgggctact
ttgcttggtgtgctcgtcactcagcccattgtaatggaccaagaggagaaccagcaagag
gaagatacagagaggacccaaattaatgttcttgcagtacaagccataacctccctggtg
ctgagtgcaatgaccatacctgttgcaggcaatccagctgttagctgtttggagcagcag
ccccgcaacaaagctttaaaagctctggacacaaggtttgggaggaagctaagtgttatc
aggggaattgttgaacaggaaatccaggcaatggtgtctaagagagataatattgctact
catcacttataccaagcgtgggaccctgttccatcactttctcctgccaccacaggtgct
ctgatcagccatgaaaaactcctactgcagatcaatactgaacgagaaataggagatatg
gattataaactgggacaggtctctatacactccatatggttaggaaataacatcactcca
ctgagagaagaagagtggggtgaggatgaagaagatgagaatgatgtaccggctccttcc
tcacctccaacttctcctataaacaccaggaaacaccgggctggtgtagatatccattcc
tgttctcagttcttgcttgaactgtacagtcagtggatattgccatccaaccctagcaag
agaacaccagtcattttgatcagcgaagtagtacgatcacttctggcagtgtcagacttg
tttacagaaaggaatcagtttgaaatgatgtacacaacactgacagagttgcgaaaggtg
catccatcagaagatgaaattcttgtacagtatttggtaccagctatttgtaaagctgct
gctgttcttggaatggataaagctgtggctgaaccagtaagtcgactgctggaatcaacc
ctaagaagcacccatatgccaagtcggattggagctctgcatggaattctttatatcctt
gagtgtgacctgcttgatgagacagcaaagcaactcattccaattatcagcgagtatctg
ctctccaatttgagaggagtagcacattgtgtgaatatccataaccaacagcacatcttg
gttatgtgtgcagctgctttctatttgatcgagaattacccacttgatgtagggcctgaa
ttctctgcaggaattatacagatgtgtggagttatggtgtctggaagtgatgaatcaaca
ccctccatcatttaccactgtgtcctgagaggactggaacgactcctcctttcagagcag
ctttccaggctggatagcgagtctctggttaaactgagtgttgacagggtgaatgtgcag
agcccccacagagcaatggcagcccttggattaatgctgacttgcatgtacacaggaaag
gaaaaaatcagccccagccgtatcacggatgcaaatcctggtgctcccgacagtgaatct
gtgattgtagctatggaacgagtgtctgtcctttttgataggatcaggaagggctttcct
tttgaagctcgagtagtggctcggattcttcctcaattccttgatgacttctttccccca
caagatgtaatgaacaaagtcattggggaatttctatccaatcagcagccatacccacaa
ttcatggcaacagtagtttataaggtgttccagacactgcatagcactggccagtcctcc
atggtccgtgactgggtgatgctctctctctctaatttcacacaaagaacacctgtggca
atggcaatgtggagtctttcctgtttttttgttagtgcttccaccagtcaatggatttca
gcaattcttccacatattatcagcagaatgggaaagtcagagcaagtggatgttaacatc
ttctgtttggtggccatagacttctaccgacaccagattgatgaagaattggatcggagr
gccttccagtcagtgtttgaggtggtagcatctccaggaaccccataccatcgcctgctg
acttgtttgcaaaatgtccacaaggtcacagcatgctga
DBGET
integrated database retrieval system
