Malurus melanocephalus (red-backed fairy wren): 130573212
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Entry
130573212 CDS
T09178
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04140
Autophagy - animal
mmea04148
Efferocytosis
mmea05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130573212 (VPS18)
04148 Efferocytosis
130573212 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130573212 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmea04131
]
130573212 (VPS18)
Membrane trafficking [BR:
mmea04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130573212 (VPS18)
Hops complex
130573212 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
zf-RING_5
zf-RING_11
Lact-deh-memb
zf-RING_UBOX
zf-ANAPC11
zf_RING_Vps8
zf-RING_2
Nup54_57_C
DUF2229
DUF5600
zf-rbx1
DUF1664
Motif
Other DBs
NCBI-GeneID:
130573212
NCBI-ProteinID:
XP_057221491
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLHRSVSVQQSRASVGIPHSGYVSARLEKETPIFNKQRIDFAPPEKINXL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTSQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERVIEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFAVHADHLPSFREFPANLGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPDSILSDERVWVYPSDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFL
EKFGSLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSNL
KPSEKTQTTLLTTWLTELYLNWLGVLQGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHKDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHRACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAVTSQPSKSHHRPKDADTISLGKGQPSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatcctggacgagtatgaggactccctgcaccgctccgtgtccgtgcagcag
agccgcgccagcgtgggcatcccgcactcsggatatgtcagtgcacgactggagaaggaa
acaccaatatttaacaagcagaggattgattttgctcctccagagaaaattaacarctta
gtggtttcctccaaccagctctgtatgagccttgggaaagacacccttctcaggattgat
cttgggaagccagatgaacctaatcaggtagaactgggacgcaaagatgaagccaaagtt
tacaagatgtttttggaccacacaggctctcatctcctgattgctctgaacaccagcgaa
tgcctttacctgaacagaagtgttcagaaagtgcgggctctctcccgctggaaaggacac
ttgattgaaagtgtgggctggaacaaatttcttggttcagagaccaacacagggcctatc
ctggtggggacatcccaggggcagatctatgaggctgaaatctctgtcagtgagggaagc
ctcttcagcactaaccctgaccagtactttcgacaggtctacactctggaggaggaatct
ggacctgcaccggtctgctgcttggaaattgagcgagtaatagaagggaaattttttatt
atagccaccactagaaagagactctttcagtttgttggcaaggtgcctgaagggacagag
cagcaaggcttcagctccatatttgctgtgcatgctgatcatctgcccagctttcgggag
tttccagccaacttgggtttcagtgagatagcattttacactccaaaattgcgttccaac
ccacgctcctttgcctggatgatgggaaatggggttttatatggtacattggattatagt
cgtcctgattcaattctgagtgatgaacgrgtctgggtttatccttctgatattgacata
actgtgaacaagccaatatccattgtacttacccagttccacttcctgttgctgctgcct
gaccgagtgaaggctgtttgcactctgaatggacaggttgtttttcaagatctgttcctg
gagaagtttggctcgctgacacgcatgattaaagatcccacagtccagcagatatggatc
cacactgagaaagtagtgttccgctaccatgtccagcgggaatctagagatgtgtggaag
atgtatatgaatatgaacaaattcgatttagcaaaagagtattgtaaggaccgtccagag
tgtcttgacatcgtgctggcaaaggaagcagagcactgcttccaaaataagaggtatctc
gacagtgccaaatgttacgcactgacccagaactacttcgaggaaattgctctgaagttc
attgaagccaagcaagaagaggccctgatggagtttctgattaagaagctaagtaaccta
aagccttcagagaagacacagaccactttgctgaccacgtggttgacagagctgtacctg
aactggctgggtgtattgcaaggagatccctcacagcgaaatctctatttggatacacgg
gagaagtttcgcactttcctgagcagtcctaaaaacaaagactgtctttttaataataga
gcatctatttatgagctgttggcaagccatggtgacacagagcacatggtctactttgca
gtcatcatgcaggattatgaacgtgtagtagctcaccactgccagcacgacgagtatgat
gaggctctaaatgtgctctccaggcacaaagacgagaaactcttctacaagttctctcca
gttctcatccagcatattcccaagaaggtagttgatgcttggatttctatgggctctaga
ctggatgccaggaacctcattccagcccttgttaactacagccagagtgccagcacccag
cagatcaatgaagccattagatatatggagttctgtgtctaccagctggaggaaacccag
caagccattcataactacctgctgtctctttatgctttgtgtcggccagactcactgctg
tcatayttggagcaagcaggaaccaacccaaacaggatccactacgacctgaagtatgca
ttgcgcctgtgtgcagagcacgggcaccaccgtgcatgtgtccatatttacaaagtgatg
gaattgtatgaggaggctgtggatctcgccttgcaggtggatgttgatcttgccaagtcc
tgtgcagatcttcctgaagatgatgaggaactccggaagaagctgtggttaaagattgct
cgccatgttgttcaggaagagaaggatgtcaagaaggcaatggcctgcctctccagctgt
gccctgctgaagattgaagatgtgctgccattctttccagactttgtcactattgaccat
ttcaaggaggcaatctgtaactccctggaggactacaacaagcacattgaggagctgaaa
agggagatggaggaagctacgcagagtgccaagaggatccgagaggacatccaggaaatg
agaaataagtatggctctgtggagcctcaggaaaaatgtgctgcttgtgactttccactt
ctaaaccgccctttttaccttttcttgtgtggtcacatgtttcactatgactgcctcctc
caagcagttttcccaaaccttcctgcctataagcaggcaaaacttgaagatcttcagaag
aagctggcagttaccagtcagccatccaagagccaccatcgtcccaaggatgcagatacc
attagcttggggaaggggcagccgagccgggaacagatcaaagctgacattgatgatatt
gtggcagctgaatgtgtgtactgtggtgagctcatgatccggtccattgacaagcctttt
attgatccccaaaagtatgaagaggagatgcaaagctggctgtag
DBGET
integrated database retrieval system
