Malurus melanocephalus (red-backed fairy wren): 130573245
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Entry
130573245 CDS
T09178
Symbol
VPS13A
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmea04131
]
130573245 (VPS13A)
Membrane trafficking [BR:
mmea04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
130573245 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
130573245
NCBI-ProteinID:
XP_057221541
LinkDB
All DBs
Position
Unknown
AA seq
3191 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLKLGIWGGAVALKNLEIKENALSQLGVPFKVKAG
HIGQLNLQIPWQNLYTQPVEAVLDGVYLLIVPTASIKYDAEKEAKQFLEARQRELQRIEE
AKQKIADRDKVKEEKQDTFVEKLVTQVIKNLQLKISNIHVRYEDDITNRDNPLSFGISLQ
NLSLQTSDKNWNPCLHDETAKLFHKLVRLDNLFAYWNVKSEMFYRGGFDESLVNLKHGVA
SHNVIPEGYDFVFRPISAKAKLLMNPRSDTDFSSPKMDLDVNLQGITVELNKPQYFSVME
LLESVDMMTRNLPYRKYRPDVPVHNNAKTWWKYVIYGILEVNVQPKLQMWSWEHISHHRK
QVKNYKEMYKTKITSKKPSEEILKLLEEFEKTLDIFNITLARQQAEVEATKAGLKIYRPG
VKQDDENSGGWFSWMWSWSGEKKNEQKQEVKGSSLEELMTKEEKAKLYAAIGYSETAVDP
TLPKSYEAMKFSVKLLSMSISIREYKQAPKLVEFALTDLSTVFTQRPGAQAIRFETKITS
LEVTGVSREKSTPCLLSSRTAYSDESTLLLSIMFETNPLDEKADQRIRIESQPLEIVYDA
MTVNSIVDFFRPPKDVHLEQLTSATLMKLEEFREKTSTGLMYVIETQKVLDLKINLMASY
IIVPEKGFYDHTSNLLLLDLGNLKMTSKSRSDLAELKVGQSTIEDIMSRAYDSFDIQLSS
MQLLYSKHDENWQEARKLKNSSQCILQPLDVKLEFSRAMVLTDARMPKFKLFGQLPLLSV
QISDQKVKSILELIDSIPKPESAPATSSPPKMTEAALSPVLSSTHLSPSMYPVLDLHSFA
ESESEEEFYDALSSPEEDVPFFEASSDSLKRVSSTRRKTLRKQDSLKNITEFQLRFEVAE
VLIKLCRLAGNTEMPVLQLDILGLGTEYKVRKFDMTASAFLHEIGLLCPEYMDDNDKPVY
IITTLDNVEDDLLTLEYIKTDIKGPEVKTVYQNVLQKIKVNFSSLDVHLHTEALLNAMNY
LTNLLPKEGIKVAEEPVHEKAEEKKDVLKKLTSKKSKYEDVIDFVICADLSCLRIFIREK
KHRIAEIHIEGLDSQVIVKKAATDVTAKLKNIIVVDSDETALYKKALYITGKEVFNFRMV
SYVNATDGIAYTNMDVVDNRIYLIVGCIQVVFVNKFVSSILAFVNNFQAAKEAFTEATVQ
AAEKAATGVKGLAERSSRLALDINIKAPVVIVPQSAKSANVLVADFGLITVKNQFFIAKT
KTRYNLPPVIDSMTVKLSELKLYRSYYEQDSLQSEVQLLQPVNLELAVERNLAAAWYNEV
PDIEISGRLKPMNLILSQEDITTILRTLNENAGESSDASAALPELKESASHSSTSHQSAG
VTVVTSAVVEMHSPMKIKTTLKLDVRFDSLTLVLYSPGSKQVNSSDQRDDLLKLAEFKLV
LISAALKMLSDGSMNASVKLANCTLDDKRESIQKATPRMVEMKHGFEKKVMVDINYKQGR
DGTLLDVIVQEIYLCASMEFLITVADIFLKANAESAAAQRHTKQSLHSKDQAPAQPVSTM
EMNIVVKNPEIVFVGDLTRSDAPALVVTTQCEIFIKNSPERHNMTAAVKEIQMKACPFLP
EERKGNVTTVLQPCDLFFEMKQYGTDPQRADLTIKSLTIKVSPIIINTVITITSALYQTT
ETAEEEINQIPPDLWNKKDIKNLKMWFLEETSENEDKNPTTELVPTGESLKINVESVLIT
LEAGVGHRTVPMLLAKSSFVGEVKNWSTLINLHSCLELEVHYFNEMFGVWEPLLEPLEVE
KTDLFKPWILEIKMKKAKKALFESDDDEEETYKVPEYKTVIHVSSKDQLNITLSKLGLQM
LSNLGTAFAEAASQTSDIFKKDRAPFVIKNALGLPITVSPSDSFSVLNVAFGAKIFHLED
GENLNMEFVRTKNESDQFTAMTTMCSKRFYIQICPHNHSAVEKIPLTKVGRCIYKVRHEE
SGVERSIVCQIDTVEGSKMITIRSPVQIRNHFSIPLNVFEEGRCLGTASPANEFNIPFSS
YRSILSLQPLPNESGVTGEYDMCEGITFDEIMKNVDSLLQRKCQSERSSNHSLIINIVPV
KDSLTSSLCAEDEWDFPYVVHLWPSVLLRNLLPYRITYSVEGNGNKFDALEEGCSAQIHN
AVLDQTKLDLQLLNYLDQNWKSEYHIKSNLPEISFTTFYCITELDKTELDIAVHVTYTTG
QMIIAVHSPYWMVNKTGRMLQYKADGIHRKHPPDYKKPLLFSFQPKNFLQNNKVQLRVTD
SELSDQFSLDTVGSHGSVKCKSHKMEYQVGVTINNSSFNITRIVTFTPFFMISNRSKYTL
EVAEEGKEKWIPIVLQQCIPFWPENDANKLLVRVENSDLPPKKINFDQQENCLLLHLDNK
LGGIAVDVNLTEHSTVITFSDYHDGAAPFLLINHTKEEIIEYGQSSLSELEDCLQPNKAV
LYTWADPTGSRKLKWRCGNRIEEIAPKEDKMEILSVDPRKAVYLMSFYEGLQRIVLITED
ENVFKLTYESVKAELAEQEIILSLQDVGISLVNNFTRQEVSYIGITSSDVVWETKPKKKS
RWRPMSVKQIEKLEQEFRDYCDTSPSENKIVELDSNVSVCLTPNGMNMKIQQPNEIPIRR
NYLPALKVEYSSSAHQKSFRIQIYRIQIQNQIPGAIFPFVFYPIKPPKSITLDSAPKPFT
DVSIVMRTAGHSQISHVKYFKVLIQEMDLRLDLGFLYAVVEFFTHTDVPSDQELQLFKKD
VESLQEELMSVSSMDTSQISLYEYFHISPIKLHLSFSLSTGGEDSNKEERKNELIPLQSL
NLLLKSIGATLTDVQDIVFKLAFFELRFHFYTTQQLQSAVVKHYSKQAIKQMYVLILGLD
VLGNPFGFIRGLSEGVEAFFYEPYQGAIQGPEEFMEGMALGLKALVGGAVGGLAGAASRI
TGAMAKGVAAMTMDEDYQQKRREAMNKQPTGLREGITRGGKGLVSGFVSGITGIVTKPIR
GAQEEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKKVADASEDVVSLRPPRFFG
EDGVIRPYRLRDGTGSQMLQKIENGRFAKLKYIAHAMVNRTDLLMVTKSGVLFVTKGTFG
QLTCEWQYTYDEFTREPFIVDGRRLRIEAKERVKSVFHAKEFGKIINFRSPEDAKWILSK
LEEARENQPKL
NT seq
9576 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttgagtcgctggtcgtggacgtcttgaaccgtttccttggcgactacgtggtg
aatctggacagctcccagctgaagctgggcatctggggaggagctgtagcactgaagaat
ctggaaataaaagaaaatgcactgagtcagttgggtgtgccattcaaagttaaagcagga
catattggtcaacttaacctacagattccatggcaaaacctttatacccaacctgttgag
gcagtccttgatggagtttatttgcttattgtgcccacagccagcataaaatatgatgct
gaaaaagaagccaagcaattcttggaagcaagacaaagagaattgcagaggatagaggaa
gcaaagcagaagatagctgaccgagataaagtaaaagaggagaaacaagacacttttgta
gaaaagctagttactcaggtcatcaaaaatcttcagctgaaaatttccaacatccatgtt
cgctatgaagatgatatcacaaatcgggataaccccttgtcatttgggatttcacttcag
aatctaagtttgcagacctcggataaaaattggaatccatgtttacatgatgaaactgcc
aagttgttccacaagcttgtgcgattggataacctttttgcttattggaatgtgaaatca
gagatgttctaccgtggtggttttgatgaatcattggttaacttaaaacatggagttgcc
agccacaatgtgattccagagggttatgattttgtattccgcccaatttcagctaaagcc
aaactccttatgaatcctcgatctgatactgacttttcatcgccgaaaatggatttggat
gtaaatttacagggtataaccgttgaactcaacaagccacagtacttcagtgttatggag
ctccttgagtctgttgatatgatgactcgaaatctgccgtataggaagtatcgacctgat
gttccagtgcacaacaatgccaagacatggtggaaatatgttatttatggcatccttgaa
gtaaatgttcaacctaagcttcaaatgtggtcatgggaacatatttcgcatcataggaag
caagtaaagaactataaagagatgtataaaacaaagataacatcaaaaaaacctagtgaa
gaaatcttaaaattgttggaggaattcgaaaagaccttggatatttttaacattactcta
gcaaggcaacaagcagaagtagaggcaactaaggctggattgaaaatctacagaccagga
gtaaaacaagatgatgaaaattctggtggctggtttagctggatgtggagctggtcaggt
gaaaaaaagaatgaacaaaaacaagaagtcaagggttcaagtcttgaagagctgatgaca
aaggaagagaaggctaaactttatgcagcaattggatatagtgaaacagctgtggatcca
acccttccaaaatcatatgaagccatgaaattctcagtgaagttattgagcatgtctata
tcaataagagaatacaagcaagctcctaagctggtagaatttgcattaactgacttgagt
acagtatttacccaacgaccaggtgcacaagcaataaggtttgaaacaaaaattacctca
cttgaagtcacaggtgtgtctcgagaaaagagtacaccctgtctcctgtcttctcgaaca
gcctattcagatgagagtaccttacttttaagcataatgtttgagactaatcctttggat
gagaaagcagatcagaggattagaatagaatcacaaccattggaaatagtatatgatgcg
atgaccgtaaacagcatagtggatttcttcagacctccaaaagatgtacatttagagcaa
ttgacatcagcaactctgatgaaacttgaagaattccgtgaaaaaacatcaacaggctta
atgtatgttattgaaacccagaaagtgcttgacctcaaaattaacctcatggcttcatac
atcattgttccagagaaaggattctatgatcatacatcaaatttactacttctggatctt
ggtaatttgaaaatgactagcaaaagtcgttctgatttagcagaactcaaagtaggacaa
agcactattgaagatataatgtcaagagcttatgacagttttgatatccagctcagcagt
atgcagttactgtacagcaagcatgatgagaactggcaagaagctcggaaactaaaaaat
tcatctcagtgcatcttgcagcccttggatgtaaaactggaatttagcagagctatggta
cttacagatgcaagaatgccgaaattcaaactgtttggacagttgcctttactttctgtc
caaatatcagaccagaaggtgaaaagtatcttggagctaattgacagcattcctaagcca
gaaagtgcgcctgctaccagttctcctccaaaaatgactgaggctgcactgtcccctgtg
ctgtcatcaacacatttgtctccaagtatgtatcctgttttggatcttcattcatttgct
gagtcagaatcagaagaagaattttatgatgcactaagcagtcctgaggaagatgtacca
ttttttgaagcctcatctgattccctcaagcgtgttagcagtacaaggcgaaaaacccta
cgcaaacaagactctttgaaaaatataacagaattccagctaaggtttgaagtagctgag
gtcttaattaaattatgccgtcttgctggtaatactgagatgcctgtgctgcagcttgat
attttgggcttaggcactgaatataaagtaagaaaatttgacatgactgcaagtgctttc
cttcatgaaattggtcttctgtgtccagagtacatggatgataatgacaagccagtttac
ataattactacattggataatgtagaagatgatcttctcactctggagtatataaagact
gatattaaaggaccagaagtgaaaactgtctatcagaacgttctgcagaaaataaaggtg
aacttttcatctctagatgttcatttgcatactgaagctctgctgaatgctatgaactat
ctgactaatcttctacccaaagaaggaattaaagttgcagaagaaccagtccatgaaaaa
gcagaggagaagaaagatgttcttaagaaattaacatcaaaaaaatctaagtatgaagat
gttattgacttcgttatctgtgcagatttatcatgtttgcgtatttttatcagagagaaa
aaacacagaatagctgaaattcacattgaaggtctggacagccaagtgatcgtgaagaaa
gcagcaaccgatgtgactgcaaaactgaagaacatcattgttgtggattctgatgagaca
gcattgtataaaaaggctctttacatcacaggaaaagaagtattcaacttcagaatggta
tcatatgtgaatgctacagatggcattgcatatacaaatatggatgttgttgacaatcgt
atttacctaattgttgggtgtattcaagtrgtttttgtcaacaagtttgtttcatctatt
ttggcttttgtaaataactttcaagcwgccaaagaagcttttactgaggcaactgttcaa
gcagcagagaaagcagctacaggtgtaaaagggttagcagagcgtagttcccgtttggcc
ctagatatcaatatcaaagcacctgttgtgatagttccacaatctgcaaagtctgcaaat
gtcctggtggctgactttggtctaatcaccgtgaagaaccaattctttattgctaaaaca
aagacacgatataatcttccacctgttattgactctatgacggtgaaattgagtgaacta
aagttatacagatcttactatgagcaagattctttgcaaagtgaagtacagctgctgcag
ccagtcaatctggaactagctgttgaacgaaatttagctgctgcgtggtataatgaagtt
cctgatattgaaatatctggccgactcaagcctatgaatctaattctcagtcaggaagat
attaccactatactgaggacgctaaatgaaaatgcaggtgaaagctctgatgcatcggcg
gctttgccagagttgaaagartcagctagtcattctagtacttcacatcagtctgcagga
gtaactgttgtgacatcagctgtggtagaaatgcattcacctatgaaaataaaaacgacg
ctaaaactggatgtcagatttgactctctgactttagtattgtatagtccaggttcaaaa
caggttaacagttctgatcaaagagatgaccttttgaagcttgcagagtttaaattagtt
ttgatatcagctgctctgaaaatgttatcagatggttcaatgaatgcttcagtcaagctg
gcaaactgtacattagatgataaaagagagtcaatccagaaggctacaccaagaatggtg
gaaatgaaacatggatttgaaaaaaaagttatggtggatataaactacaaacaggggaga
gatggaactcttcttgatgtcattgttcaagagatatatctttgtgcgagcatggagttt
ctaattactgtagcagatatattcctaaaggcaaatgcagaaagtgctgctgcacagaga
cataccaaacagtcattacattcaaaggaccaagcacctgcgcagcctgtatctacgatg
gaaatgaacattgttgttaaaaatccagagattgtgtttgtgggtgatttaacaagaagt
gatgctcctgcattggtggttacaactcagtgtgagatcttcattaaaaatagtcctgaa
aggcacaacatgacagctgctgttaaggagatacagatgaaagcatgtccatttcttcca
gaggaaaggaaagggaatgtaactacggtattgcagccttgtgacttattctttgaaatg
aaacagtatggtactgatccacaaagagctgatttaacaattaaatctctaacaataaaa
gtttcaccaataattataaacacagtaattactattacatcagctctttatcaaactaca
gaaacagcggaagaagagatcaatcaaattcctcctgacttgtggaataaaaaagatata
aaaaatctgaaaatgtggtttcttgaagagacgagtgaaaatgaagataaaaatccaacc
actgaactggttcccacaggagagtcattgaaaattaatgtagaatctgttcttataaca
cttgaagcaggggttggacacagaactgtaccgatgcttttagccaagtcctcatttgtt
ggagaagtcaagaactggagtactctaatcaacttacattcttgtcttgagctagaggta
cattattttaatgaaatgtttggtgtgtgggagcctttacttgaaccactagaagttgag
aagactgatttattcaagccatggattcttgaaatcaagatgaagaaggctaaaaaagcg
ctgtttgaatctgatgatgatgaagaagagacctacaaagttccagaatataaaacagta
atacatgtttcctcaaaagaccagctcaacattacgctgtccaagcttggattgcaaatg
ctgagtaacttgggcacggcatttgctgaagcagctagtcaaacttcagacatcttcaaa
aaagaccgagcaccatttgtaataaaaaatgctttaggacttcccatcactgtctcacct
agtgattcctttagtgtccttaatgttgcatttggagcaaaaatatttcatttagaagat
ggagagaatttaaatatggaatttgtcagaactaaaaatgagagtgaccagttcacagca
atgacaacaatgtgtagcaagagattttacattcagatctgtcctcataatcattctgct
gtggaaaagattccattgacaaaagtgggtcgatgtatttacaaagtgagacatgaggag
tcaggtgttgaaagatccattgtctgccaaattgacacagttgaaggaagcaagatgata
actatacgctcccctgttcagataaggaatcatttttcaattccattaaatgtttttgaa
gaaggaagatgtttaggaactgcttcaccagcaaatgagttcaacatacccttttcctct
tacagatccatactgagtttgcaaccactacccaatgaaagtggagtgactggagaatat
gatatgtgtgaaggaattacatttgatgaaattatgaaaaacgttgacagtttattacaa
aggaaatgccagtctgagaggtcaagtaaccactcacttatcatcaatattgttcctgta
aaagattcattgacatcttcattatgtgcagaagatgaatgggattttccatatgttgtg
catttatggccttctgttcttctccgcaatcttcttccttatcggataacttattctgtg
gagggaaatgggaacaaatttgatgctctagaagaaggatgttcagcccagattcataat
gcagtcttggaccaaacaaaactagatttgcagttgcttaactatcttgatcaaaactgg
aaaagcgagtaccatataaaaagtaatctacctgagatcagcttcacaacattttactgt
atcacagagctggataagactgaactggatattgctgttcatgtgacctacacaactggg
cagatgattatagcagttcacagtccctactggatggtgaataaaactggtcgaatgtta
caatacaaagctgatggtattcaccgcaagcatcctccagattacaaaaagcccctcctt
ttttctttccagcctaagaacttcctccaaaataacaaggtgcagcttagggtaactgac
agtgaactatcggatcagttttcactggatactgttggaagtcatggttctgtaaaatgc
aaaagtcataaaatggaatatcaagttggtgtcaccataaacaacagcagtttcaatatt
actagaattgtaaccttcactccattttttatgatctcaaatagaagtaaatacactttg
gaagtagctgaagaaggcaaggaaaagtggattcccattgttttgcaacagtgcattccc
ttttggcctgaaaacgatgccaacaaactgcttgttagagttgaaaattctgatctccct
ccaaagaagataaattttgatcagcaagaaaactgtcttttactgcatttggacaataag
cttgggggaattgcagtggatgttaatctgactgaacattctacagtaattaccttttct
gattaccatgatggtgcagctccatttctgctgataaaccatactaaagaggaaattatt
gaatatggacaaagctccctcagtgaattggaagactgcctacagcccaataaggcagta
ctgtatacttgggcagacccaacaggatctaggaaattgaaatggagatgtggaaataga
attgaggaaattgccccaaaagaggacaaaatggaaatactcagtgtggatcctagaaaa
gcagtctatttaatgtcattttatgaaggtttgcagcgtattgttctgatcactgaagat
gagaatgtatttaaattgacgtatgaaagtgtaaaagcagaactagcagaacaagaaatt
attctgtctttgcaagatgttggaatttcattggttaataattttacaagacaagaggtg
tcctacattggaattacaagttctgatgtggtttgggagacaaaacccaagaagaagtca
agatggagaccaatgagtgtcaagcaaattgaaaaattagaacaagaattcagagattac
tgtgatacaagtccttcagaaaataagatcgttgagttggattctaatgtttcggtatgt
ttaactcctaatggaatgaacatgaaaattcaacagccaaatgagattcctatcagaaga
aattatctgccagctttaaaagtggaatacagctcatctgcacatcagaagtctttcaga
attcaaatttacaggatacaaatacaaaaccagattcctggagccatatttccctttgtg
ttctatcctattaaacctccaaagtccatcaccttggattcagcaccaaaaccatttact
gatgtcagtattgtcatgagaactgcaggacactcacaaatatctcatgttaagtatttt
aaagtcctgattcaagagatggatctcagattagatcttggcttcctgtatgcagttgtt
gaattctttacacacactgatgtgccaagtgaccaagagctacaacttttcaaaaaggat
gttgaatcccttcaagaagaactgatgagtgtgtcttcaatggatacgtcacaaatcagc
ttgtatgaatacttccatatctctcccattaagttacacttaagcttttcactcagtacg
ggtggagaagatagtaacaaagaagaaagaaagaatgaattaataccacttcagtccttg
aatcttctgctgaagagtattggggccacccttacagatgtacaagatattgtctttaag
ttggcattctttgagctcaggtttcacttctatactacacagcagctccaatcagcagtt
gtgaagcattattcaaaacaggctattaaacagatgtatgttcttattcttggccttgat
gtgttgggtaatccatttggattcataagaggcttgtctgaaggagtagaagctttcttt
tacgaaccttaccagggagctatccagggacctgaggaatttatggaaggaatggcgcta
ggacttaaagcactggtagggggagctgttggtggattagcaggagctgcctcgagaatc
acaggtgctatggcaaaaggagtagctgcaatgactatggatgaggattaccagcaaaaa
aggagagaagccatgaataaacagcccactggtctgagagagggtatcactcgtggtgga
aaaggattagtttctggttttgtcagtggcataacaggaatagttacraaaccaataaga
ggagctcaggaagaaggagcagctggctttttyaaaggtgttggaaaaggtttagtggga
gcagtagctagacctactggtggaatcatagatatggcaagcagcacatttcagggtatt
aaaaaagttgcagatgcatcagaagatgtggtaagcctgcgcccacctcgcttctttggt
gaagatggagttattagaccttacagattaagagatggaactggaagtcaaatgttacag
aaaattgaaaatggaagatttgcaaaactcaaatatattgcgcatgctatggtcaacaga
acagatctgttaatggtaacaaaaagtggtgtgctatttgtgacaaaagggacgtttgga
cagctgacatgtgagtggcaatacacttacgatgaatttaccagagaaccattcatcgtt
gatggtcgaagattgcgcattgaagccaaggagcgagttaaatctgtcttccatgccaaa
gaatttggaaaaatcattaattttagaagtccagaggatgctaagtggatcctttctaaa
ctagaagaagcaagagagaatcagccaaaattataa
DBGET
integrated database retrieval system
