Malurus melanocephalus (red-backed fairy wren): 130573307
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Entry
130573307 CDS
T09178
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03013
Nucleocytoplasmic transport
mmea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130573307 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
130573307 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmea03019
]
130573307 (THOC2)
03041 Spliceosome [BR:
mmea03041
]
130573307 (THOC2)
Messenger RNA biogenesis [BR:
mmea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
130573307 (THOC2)
Spliceosome [BR:
mmea03041
]
Complex C
Other components
EJC/TREX
130573307 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
130573307 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
130573307
NCBI-ProteinID:
XP_057221638
LinkDB
All DBs
Position
Unknown
AA seq
1621 aa
AA seq
DB search
MAALLPAEWIKNWEKGGKSEFVQLCRALSENKNHDVGFRDIQQALYELAYHVVRGNLKHD
QASNVLGDVIEFREDMPSILADVFCILDIETSCLEEKNKRDHFTQLVLACLYLVSDTVLK
ERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLS
GNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTL
CHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIV
EAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWHHAQSI
MDQMPPFYATSHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQAESF
EELRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMETLFSCLL
SITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQ
TIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYL
TSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYV
ANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKK
SSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFL
ASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQH
KVHKYITSCELVMAPVHEAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVN
KLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWL
LAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDI
IYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNK
ADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQAL
ERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVPATVQNG
PGGAGMPTSLTINTVRLEEGTTEETADKLKEKSQGVVKVINKTVNATPKVTTSNGNSASN
SKIIKEKDDKEKSGKEKDKEKKDKTPAATPEMKALGKDGKDKPKEERANKDEKAREIKEK
TPKSDKEKEKVKKEEKASKEEKSKTVVTIIESKSTAEKEREKEPSRERDLAKEMKSKENA
KGGEKVPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKGTAVLPKVPLVSEN
CTSSRVISVHFLQDNLNELKDSSAKHYINHTTPTLSKSKEREVEKKDLDKSRERSREREK
KEEKDRKDRKRDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRLNEKEKEKN
KSKSSGKEKGDSIKAEKMEKSSSGSKKESRHDKEKAEKKEKRDSTGGKEEKKHHKSSDKH
R
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctcccggccgagtggataaagaactgggagaaaggcggcaagagcgag
tttgtgcagctgtgtcgtgctctcagtgaaaacaaaaaccatgatgtgggtttcagagat
atccagcaggcgttgtatgagcttgcttaycacgttgtcagaggaaacttaaagcatgat
caagcttctaatgttcttggtgatgtcatagaatttcgagaagatatgccttctattcta
gctgatgtattctgcatattagatattgaaacaagttgtttagaagaaaaaaataagagg
gatcattttacacaactggtattggcctgtttgtatcttgtatctgacactgtcctaaag
gagcgtttagatccagagacgctggagtcattgggactcatcaaacagtctcaacagttc
aatcaaaaatctgttaaaataaagacaaaactattttataagcaacagaagtttaatttg
ctaagagaggagaatgaaggttatgcaaaactcattgcagaactgggtcaagacttatct
ggaaatatcactagtgatttaatccttgaaaatatcaaatctttaataggatgtttcaat
cttgatcctaacagagttttggatattatcctagaagtttatgaatgcaggcctgagtat
gatgatttctttgtaccactgatagaatcttacatgtacatgtgtgaacctcaaactcta
tgccatatccttgggttcaaattcaaattttatcaggatccgagtggtgagaccccttcc
tccttatacagagttgctgctgtccttttgcaacataatctcatagatttggaagatctt
tatgttcatcttttgccaggggataatgccatcattgaggaacacaagcgagagatagtg
gaagctaaacaaattgtcagaaaacttacaatggtcgtcttatcatctgaaaagactgag
gaaaaagagaaagaaaaggaaaaagaggaggagaaaactgaaaagcctcctgataatcaa
aaacttggcttattggaagccttattaaaaattggtgattggcaccatgcacaaagtatt
atggatcagatgcctccgttttaygctacttcgcacaagccgatcgccatcgcgctttgc
cagctcgtccatgtgacaattgagcctctgtaccgcagagttggtgtacctaaaggagct
aaagggtcaccgatttcttctttgccaaacaagagagcaccaaaacaagcagagagtttt
gaggagttgagaaaggaagtgttcaacatgctttgttaccttggtcctcatctgtcccat
gatcccattttatttgcaaaagtygtgcgccttggaaaagcatttatgaaagagtttcag
tctgatggaagcaaacaggaagataaagagaaaatggagacactgttcagctgcttgttg
agtattactgatcaagtcttgcttccatctctttccctgatggactgcaatgcrtgcatg
tctgaggaattatgggggatgttcaaaacctttccataccagtaccggtaccgtctctat
gggcaatggaagaatgaaacgtacaatagtcaccctcttcttgtgaaagttaaagctcaa
accatagaccgagccaaatacatcatgaagcgtttaaccaaggaaaatgtgaaaccctct
gggagacaaattgggaagctgagccacagcaatcctacaattttatttgattatattttr
tcacaaatacaaaaatacgataacttgataactccagttgttgattcactgaaatacctc
acttccctgaactatgatgtcttggcttattgtatcattgaagcattggcaaaccctgag
aaggagagaatgaagcatgatgacactacaatctcaagctggctgcagagtctggcaagc
ttttgtggtgccgttttccgaaaatacccaattgaacttgcaggcctcctgcagtatgta
gccaaccagctgaaagctgggaaaagctttgatttgcttattttaaaagaagtggtgcag
aaaatggcagggatagaaatcactgaagaaatgacaatggaacaattggaagccatgaca
ggtggagaacaactgaaagctgagggtgggtactttggccaaatcaggaatacaaaaaaa
tcatctcagagattgaaagatgcgttactggaccatgaccttgccctcccrctgtgcttg
cttatggctcagcagagaaatggtgtcatatttcaagaaggaggggaaaaacatctgaag
ctggtgggaaaactgtatgatcagtgccatgacaccctggtacaatttggcgggttttta
gcatccaatctaagcacagaggattacattaagcgagtgccttctattgatgttctctgt
aatgagtttcacacacctcacgatgctgcatttttcctctcaagacccatgtatgcacac
cacatttcatcaaagtatgatgaactaaaaaaagctgagaagggaaataaacagcagcac
aaagttcacaaatacattacatcatgtgagctggtgatggctcctgttcacgaagctgtg
atttctctgcacctccctaaagtttgggatgacatcagccctcagttttatgccacattc
tggtctttgacaatgtatgaccttgctgtgccccacagcagctatgacagagaagtcaat
aarcttaaagtccagatgaaagccatagatgacaatcaggaaatgcctccaaataaaaag
aaaaaagaaaaagaacgttgtacagctctgcaggacaagctccttgaagaggagaagaag
cagttggagcatgtgcagagggttctccagagactgaaactagagaaagataactggctt
ctggcaaaatctaccaaaaatgagaccatcaccaaatttttrcagttgtgtatatttcct
cgatgcattttttcggcaattgatgcggtttactgtgctcacttcgttgaacttgtgcat
caacagaaaacacccaacttctccacacttctctgctatgaccgagttttctctgatatt
atatatacagttgcaagttgcactgaaaatgaagccagtagatatggcaggtttttatgc
tgtatgctggagaccgtgaccagatggcacagtgacagagtcatatatgaaaaggaatgt
ggcaactatccaggcttcctaactatattacgagcaactgggtttgatggtggaaataag
gctgatcaattggattatgagaattttagacacgtggtacacaaatggcactataaatta
actaaggcttctgtgcactgcctggaaacaggtgaatatacacatatcagaaacatcctg
atygtgctgaccaaaatccttccatggtatccaaaagtgctgaacctgggtcaagccttg
gaaagaagagtacacaagatatgtcaggaagagaaagagaagagacctgatctatatgca
ttggctatgggctattctggacagttgaaaagtaggaagcctttcatgatacctgaaaat
gaatttcaccacaaagacccacctgccaggaatgctgtacctgcaacagtacaaaatggg
ccaggtggtgctgggatgcctacgtctctcacaataaatacagttagactggaagagggc
actactgaggagactgcagataaattaaaggagaagtctcagggtgtggtgaaagttatt
aataaaactgtcaacgctacaccgaaggtgacaacaagcaatggaaacagtgcatctaat
agcaaaattattaaagagaaagatgataaagaaaaaagcgggaaggaaaaagataaagaa
aaaaaagacaagactccagctgccactccggagatgaaggcacttgggaaggatgggaaa
gataaaccgaaggaagaacgggcaaacaaagatgagaaagcaagagagattaaggagaaa
acgccaaaatctgacaaagagaaggaaaaagtgaagaaagaagaaaaagcttcgaaagaa
gaaaagtccaagacggttgttaccatcattgagtcaaagtcaactgctgaaaaggagaga
gaaaaggagccatccagagaaagagatctagcgaaggaaatgaaatccaaggaaaatgct
aaaggaggagaaaaggtgccagtagctgggtccttgaagtcacctgttcccagatcagaa
acatcagaatctgaaagggaacaaaaacgccgcaaagttgatacacattcttctccatca
cattcctcaacagtaaagggtacggccgtgcttcccaaagtccctctggtttctgaaaac
tgtaccagctcacgtgtcatctccgttcattttctacaggacaacctcaacgaactcaag
gattcttcagcaaagcactacataaaccacactactccaacactgtccaagagtaaggag
agagaagtggagaagaaagatttggacaagtcaagggagagatccagagagagagagaag
aaagaggaaaaggacaggaaagaccgaaaaagggatcattcaaacagtgaccgagaggta
ccacaggattcaactaaacgacgcaaagaggaaaacggcacaactggttcttcaaaacat
agcaaaagtgaaagcccttctgattcccctcgcttaaatgaaaaagagaaggagaaaaac
aaatcgaagtcttcaggaaaagagaaaggcgattcaatcaaggcagaaaagatggagaag
agctcctctggtagcaaaaaggaatcaagacatgataaagaaaaagcagagaagaaggag
aaacgggacagtactggggggaaagaagaaaagaaacatcataaatcttcagacaagcat
agataa
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integrated database retrieval system
