Malurus melanocephalus (red-backed fairy wren): 130573313
Help
Entry
130573313 CDS
T09178
Symbol
SMARCA1
Name
(RefSeq) probable global transcription activator SNF2L1
KO
K11727
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 [EC:5.6.2.-]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130573313 (SMARCA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmea03036
]
130573313 (SMARCA1)
Chromosome and associated proteins [BR:
mmea03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
130573313 (SMARCA1)
CERF complex
130573313 (SMARCA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
CHDII_SANT-like
AAA_14
Motif
Other DBs
NCBI-GeneID:
130573313
NCBI-ProteinID:
XP_057221651
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MEPGPGPGEEPRASTSSATAAPQEPGAEERNDPPFQLKLPPKAARPEKEVDPEYEEKMKA
DRAKRFEFLLKQTELFAHFIQPAAQKSPTSPLKVKLGRPRLKKDEKQSLISAGEYRHRRT
EQEEDEELLSESRKTSNVCIRFEESPSYVKGGTLRDYQVRGLNWMISLYENGVNGILADE
MGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDKDA
RAAFIRDVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE
FKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHA
VLKPFLLRRIKGEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRL
LNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLITNSGKMLVLDKLLAKLREQGSRVLLFS
QMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGI
NLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLR
LDSIVIQQGRLIDQQSNKLAKDEMLQMIRHGATHVFASKDSELTEEDITTILERGEKKTA
EMNERLQKMGESSLRNFTMDTEMSLYNFEGEDYREKQKLSMMEWIEPPKRERKANYAVDA
YFREALRVSEPKVPKAPRPPKQPNIQDFQFFPPRLFELLEKEILYYRKTIGYKVPRNPDL
PNAAQVQKEEQKKIDESMPLNTEESEEKEKLLTQGFTNWNKRDFNQFIKANEKYGRDDID
NIAREVEGKSPEEVIEYSAVFWERCNELQDIERIMAQIERGEARIQRRISIKKALDAKIA
RYKAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKMGFDKENVYEELRQCVRNAPQFRFD
WFIKSRTAMEFQRRCNTLISLIEKENMEIEEKERAEKKKRGAKVTASQKRKADLAAENSG
KKDAKKVKS
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggccccggccccggagaggagccccgcgcctccacatcctccgccacggcc
gccccgcaggagcccggcgccgaggagagaaatgatcccccatttcaactcaagcttcct
ccaaaggcagctagacctgaaaaagaagttgacccagaatatgaagagaagatgaaagca
gatcgagccaagaggtttgaattcctcctgaagcagacggaactttttgcacactttatt
cagcctgcagcacaaaaatcaccaacatctccactgaaagtcaagctgggacggccacgg
ctgaagaaagatgaaaaacagagtttgatttcagctggagagtaccgtcacaggcgcaca
gagcaggaggaggatgaagagctgctgtctgagagtaggaaaacatccaatgtgtgtatt
cggtttgaggagtctccttcatatgtgaaaggaggaacactaagagattatcaggttaga
ggtttgaactggatgatctcattgtatgaaaatggtgttaatggcattctggcagatgaa
atggggcttggtaagactctgcaaacaatagctttattgggctatctgaagcattacaga
aacattcctgggccacacatggtcctggttccaaaatcaactttgcacaactggatgaat
gaattcaagcgctgggttccatccttacgtgctgtttgccttattggagataaagatgcc
agagctgcatttatccgtgatgttatgatgcctggtgaatgggatgtttgtgttacatca
tatgaaatggtaattaaagagaaatcagtcttcaaaaaatttaactggaggtacctggta
attgatgaagcccacagaataaagaatgaaaagtctaagctgtcagagattgtacgtgag
ttcaagacaacaaatcgattgctgcttacgggaactcctttacagaataacctgcatgag
ctgtgggcattactcaatttccttttacctgatgtcttcaattctgcagatgattttgac
tcatggtttgacactaaaaattgtctcggcgatcagaaactygtagaaagacttcatgct
gttttgaagccatttctcttacgtcgcataaaaggtgaagtagaaaagagtttgcctcca
aagaaggaagtaaaaatttatcttgggctcagcaaaatgcagagagaatggtataccagg
atcctgatgaaagatattgatatcctgaattcagctgggaaaatggataagatgcgyctg
ctgaatattctgatgcagctgcggaagtgctgtaaccatccttacctcttygatggtgct
gagccaggccctccttacaccactgacactcatctcatcaccaacagtggcaaaatgtta
gttctggataaactgctggcaaaactcagggagcagggttccagagtgctgctgttcagt
cagatgactcgcttgctggatatcttggaggactattgcatgtggcgtggctatgagtac
tgcaggcttgatgggcagacaccacacgaggaaagagaggaagcaattgacacatttaat
gctcccaacagcagtaaattcattttcatgctgagtaccagagctggaggtcttggaatt
aatttggcaactgctgatgtggttattctctatgattcagattggaaccctcaagtagat
ctacaagccatggatcgtgcgcatcgtattggtcaaaagaaaccagtacgggtgtttcga
cttatcactgataatactgttgaagagaggattgtagaaagagctgaaataaaactgaga
ctggactctatagttatacaacaaggaagactcatagaccaacagtccaayaaactggca
aaagatgaaatgctgcagatgatccggcatggagccactcatgtgtttgcttccaaagac
agtgagctgacagaagaagatataaccactattttagaaagaggtgaaaagaagacagct
gaaatgaatgaacgattgcagaaaatgggagaaagctccctacgaaatttcactatggac
acagagatgagcttatacaactttgaaggtgaagattacagagaaaaacaaaagctgagc
atgatggaatggattgagcctccaaaaagagaacgcaaagccaaytatgcagttgatgct
tatttcagagaagccctacgtgttagtgagccaaaagtcccaaaggctccacgacctcca
aaacaaccaaatattcaggattttcagtttttcccaccrcggttatttgaactcctggaa
aaagaaattctgtattaccgtaagactataggatataaggtacccaggaatcctgacctt
ccaaatgcagctcaggtacaaaaggaggagcaaaagaagatagatgagtcaatgcctctg
aatactgaggaaagtgaagagaaagaaaaacttctaacacagggttttacaaactggaat
aaaagagattttaaccagtttattaaagctaatgagaaatatggtcgtgatgatatagac
aatattgcccgtgaggtggaagggaagtcacctgaggaggtcattgagtactcagctgtt
ttctgggaacgttgtaatgagctacaggacattgagaggattatggctcagattgaacga
ggagaggcaagaattcaacggaggatcagtatcaagaaagcccttgatgccaaaattgca
aggtacaaagcaccttttcatcagctgcgtattcagtatggaacaaacaaagggaaaaac
tacacagaagaagaagacagatttttgatctgtatgttacacaagatgggctttgacaaa
gaaaacgtgtacgaggagctgaggcagtgtgtgcgcaacgctccccagttcaggttcgac
tggtttatcaaatccagaactgcaatggagtttcagagacgctgcaatactctcatatca
ttaatagaaaaggaaaacatggaaattgaggaaaaagaaagagctgaaaagaagaaaaga
ggagcaaaagttacagcatcacagaagagaaaagcagatttggctgctgagaattctgga
aaaaaagatgctaagaaagtgaagtcatga
DBGET
integrated database retrieval system
