Malurus melanocephalus (red-backed fairy wren): 130573322
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Entry
130573322 CDS
T09178
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04382
Cornified envelope formation
mmea04510
Focal adhesion
mmea04512
ECM-receptor interaction
mmea04518
Integrin signaling
mmea04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130573322 (COL4A6)
04518 Integrin signaling
130573322 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130573322 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130573322 (COL4A6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130573322 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmea04147
]
130573322 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
mmea00536
]
130573322 (COL4A6)
Exosome [BR:
mmea04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
130573322 (COL4A6)
Glycosaminoglycan binding proteins [BR:
mmea00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130573322 (COL4A6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
130573322
NCBI-ProteinID:
XP_057221664
LinkDB
All DBs
Position
Unknown
AA seq
1692 aa
AA seq
DB search
MGRAGALLLLLLWLGAELASAGGKKSYSGPCAGRDCSAGCKCFPEKGARGRPGPIGLQGP
IGAPGFTGPEGLPGAKGERGAVGPPGPAGQKGDKGPMGVPGFQGINGIPGHPGQPGPRGL
PGIDGCNGTLGSPGISGPDGFPGLPGLPGRPGPKGLKGEPVFAQGSLKGMKGENGLPGLD
GVPGPKGFPGPIGPAGPIGLPGFQGPVGPPGPPGPKGNMGLGFQGEKGEKGDVGLPGPPG
PPPSTGILEFMGFPKGKQGEKGEPGPQGFPGDQGLPGIPGFGXVGEKGEKGVPGLPGGRG
LLGLDGSDGIPGRKGHPGVPGFPGLDGVEGMKGELGDIGPPGPPVIIDREGVVISGAPGD
PGTPGTPGPPGDEGISGLPGLPGAPGFPGLERDGMGPGGSPGIPGVKGEVGEPGRATIGL
PGPPGRGGLPGLPGAPGLPGSLRPSVSPGTILNGRIGAPGEPGQRGLPGALGPKGYKGEP
GDCACDGGVTRAGLKGISGPPGPSGIPGVPGAKGVGGDPGSVGAPGLRGPPASAGQQGFP
GLKGEKGDPSYATVKGARGDRGATAPRGPSGIPGTPGRDGLPGLPGPPGPPGDGGLGFPG
EKGLPGLPGSKGHRGETGSPGVGYPGPSGVRGPPGDPGLDGIPGQAGLPGPPGITLPCIV
PGAYGPPGTPGFPGLPGPKGSKGFSGIPGQPGLHGSKGHPGSPGIIGLQGXPGFPGPRGE
QGSQGLPGLDGTDGLPGKMGASGLAGAKGAPGDVFGAESGALGERGRPGLPGDKGLTGEI
GFPGPKGLDGRPGLLGIKGEQGHPGYSGVPGLRGPPGPGGPFGIKGKPGPLGSAGLPGAP
GLPGVKGVAGDVGPQGPAGMKGFPGLDGAAGSPGERGFLGPPGPFGQDGRPGFSGPKGEK
GSSGLLGFPGMPGLPGVPGVNGFKGTPGTAGEKGSPGVVGLQGQKGDRGDVGPPGLPVLG
TSEQALQIKGDKGDPGLAGLGGFPGPRGDKGIXGSRGQPGLPGPAGSANKERGVLGDPGF
PGPPGQPGLPGQKGAHGIMGFPGMPGERGSDGTMGTLGFPGPIGLPGPKGDQGESLGVPG
IGGPKGERGDPGFPGERGREGLKGEPGYPGSTGVNGPKGSPGDLGQEGPAGIPGNAGLRG
APGPPGPPGQPGSVGFPGARGTAGPKGFHGFPGLNGLNGLPGTKGSPGTPGLSEAGLKGP
AGLPGPKGEEGSPGLGRGAAGFPGPKGSSGDTGPPGPMGLPGLPGTPGVSLPSDIRGRPG
DAGLPGTDGSSGFPGLPGPRGPPGPASDQGDTGTPGLPGVLGLRGIKGDVGLTGPIGLPG
ASGFKGARGEPGLMGMPGKDGPPGDPGYAGLKGETGRRGLPGRPGAPGITPQPEEVTAPA
GLPGLPGIDGVPGFDGDPGFHGPAGKPGPKGLPGRSGLKGRDGLPGTPGTVGDPGLAGAP
GPQGFEGVAGKPGSLGLPGMPGRSVGVGYTLVKHSQSDQIPPCPIGMNKLWDGYSLLYVE
GQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYWLSTTAPIPMMPVDSV
QIPQYISRCSVCEAPSQAVAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLV
SPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEQEQQFVSAPPSETLKAGQLRT
RVSRCQVCMKNL
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcgcaggggcgctgctgctgctgctcctctggctgggcgcggagctggcgagt
gcgggtggaaagaagtcctacagtgggccatgtgcgggccgcgattgcagcgctggatgc
aaatgttttccagagaagggtgcacggggtcgaccaggaccgattgggcttcaaggacca
ataggagcacctggatttactggcccagaaggtttgccaggagcaaaaggtgagagagga
gcagtgggccctcctggaccagctggacagaaaggtgacaagggtccaatgggagttcca
ggatttcagggcatcaacgggatcccaggtcaccctgggcagcctggacctagaggtctc
cctggcatcgacggctgcaatggaaccctggggagtcctggcatttctgggccagatggg
tttcctggcctacctggactgcctggtcgtcctggcccaaaaggccttaaaggagaacct
gtttttgctcaaggcagtcttaaaggaatgaagggtgaaaatggtcttcctggattggat
ggagttcctggcccaaaagggtttcctggtccaataggtcctgcaggccctataggatta
ccaggatttcagggtccagtgggtccccctgggccaccaggtccaaaaggtaacatggga
ttaggctttcaaggggagaaaggagaaaagggtgatgtagggttgccggggcctccaggt
cccccaccatcsactggaatactggaattcatgggatttccaaaggggaagcaaggagaa
aagggtgagccaggtcctcaaggattccccggagatcaaggattgcctggcatcccgggc
tttggargtgttggagaaaaaggagagaaaggtgtgcctggcttgccgggtggcaggggt
cttttgggactggatggatcggatggaattccagggagaaagggtcacccaggtgttcca
ggctttccaggactggatggagtcgaaggcatgaagggagaattaggtgacatcggtccc
ccaggccctcctgtcattattgacagggaaggtgtagtcatttcaggtgccccgggtgac
ccgggaaccccaggaacacctggtcctccaggagatgaagggatcagtggtttaccaggc
cttccaggagctccagggtttccaggcttggagagagatggaatgggccctggagggtct
ccaggtattccaggagtgaagggtgaagtgggagaaccaggaagagcgacaattggattg
ccaggccctcccggcagaggaggtttaccgggtctgccaggagcaccaggattgcctggc
tcactgcgcccttcagtctccccaggaacaatcctgaatggaaggattggggccccgggg
gaacctgggcaragagggctgccaggagctttgggtccaaagggctacaaaggagagcca
ggtgattgtgcttgtgatggaggagttacaagagctggtctaaaaggcatctcaggtccc
ccaggtccctcaggaatccctggtgtgcctggggccaagggtgttggtggagacccaggt
tctgtgggtgcaccaggactgcgaggccctccggcttcagctggtcagcaaggttttcca
ggcctraagggagaaaaaggggatccatcctatgcaacagtcaaaggtgctcgtggggac
cgtggtgccacagcacccagaggaccttcaggcatcccaggaactccgggcagggatggg
cttccaggcttgccaggmccaccaggacctcctggtgatggtggactgggtttcccaggt
gaaaaagggctgccaggattacctggctccaagggccatcgtggagaaactggttctcct
ggygtgggatacccaggtcccagtggagttcgtggaccaccaggtgaccctggactggat
gggattccaggacaagcaggtcttccaggccctccaggtatcaccctgccctgcatagtt
cctggagcgtatgggcccccagggactcccggcttcccaggactgccaggtcccaaaggc
agcaaaggcttctctggcattccaggccaacctgggttacatggttctaaaggacaccca
gggtctccaggaattataggcttgcaagggraacctggcttccctggacctcgaggagag
caagggtcccaaggactgccaggactggatggaacagatggtttgcctgggaaaatgggt
gcttcaggtttagctggagcaaaaggagctcctggagatgtgtttggtgctgagagtgga
gccctgggagagcgtggccgacctggactcccaggtgataaagggcttacaggtgaaatt
ggatttccaggaccaaaagggctggatggaagaccaggyctcctgggtattaaaggtgaa
cagggtcatccaggatattcaggtgtgcctggattgcggggacctcctggccctggaggt
ccttttggcatcaagggaaaaccaggacccttggggtcagctggccttccaggagcacca
ggacttcctggagtcaaaggtgttgctggggatgtaggaccacaaggccctgctggtatg
aaaggcttcccaggtcttgatggtgctgcaggatctcctggggaaagagggttcttaggg
ccacctgggccttttggtcaagatggacgtccaggtttctctgggccaaaaggcgagaaa
gggtcttctggcctgcttggtttccctggcatgccaggactgcctggtgtccctggagtg
aatggctttaaaggaactcctggcacagctggagaaaaaggaagtccaggagttgtggga
cttcagggtcaaaaaggtgacagaggtgatgtaggtccaccaggtcttcctgtgcttggg
acttcagaacaggcactgcaaatcaaaggagacaaaggagatcctggattagcagggctt
ggaggattccctggacctagaggtgataaaggaatcycaggaagccgtggacagcctggt
ctccctggtccagctgggtcagcaaacaaagagagaggtgttcttggtgacccaggcttc
cctggtcctcctggacaacctgggctgccaggacagaagggtgcacatggtatcatggga
tttccaggaatgccaggagagaggggttcagatggcaccatgggaacacttggattccca
ggacctattggccttcctggtccaaagggtgaccagggagagtctcttggtgttcctggm
attggtggaccaaaaggagagagaggagacccagggtttccaggagagagagggagagaa
ggactcaagggtgaaccaggctaccctgggagtactggggtgaatggacccaaaggcagc
ccaggagatcttggccaagaaggaccagcaggaatccctggaaatgctggactgagagga
gcccctggcccaccaggacccccaggacagccaggatctgttggattccctggagctcgt
ggaacagcgggacctaaaggctttcatggatttccaggtttaaatggtttgaatggctta
ccaggcacaaaagggtctcctggaacaccaggtctgagtgaagctggactgaaaggacct
gcaggtctcccaggtccgaagggagaagaaggttctccaggcttgggaagaggagctgca
ggattccctggaccaaaaggctcatctggagatacaggtccccctggtcctatgggactg
cctggcttgccaggaacacctggagtttctcttccatctgacatacgtgggagacctgga
gatgctggccttccaggcactgatgggagttcaggtttcccaggacttccaggcccacga
gggccccctggcccagcttctgaccagggtgacacaggcactccaggtttgcctggtgtt
cttggcttgcgaggcattaagggtgatgtgggactcactggtcccattggactccctgga
gcatctggattcaaaggggcsagaggagagcctggcctaatggggatgccaggtaaagat
gggcctccgggggatcctggctacgccgggctgaaaggtgaaacgggccgtcgaggtctt
cctggcagaccaggggctccaggaataaccccacagccagaagaagtcacagcccctgca
ggaytacctggtctgccaggaattgatggtgtccctggctttgatggagatcctggattc
catggcccagctggaaaaccaggcccaaaaggtttgccaggaagatctggtttgaaagga
cgtgatggcttacctggaacacctggcacagttggggatccaggacttgcaggtgcccca
ggaccacagggatttgaaggtgttgctgggaagccgggttcccttggattgccgggaatg
cctggtcggagcgtgggcgttggctacaccctggtgaagcacagtcagtcrgatcagatc
cccccgtgccccataggaatgaataagctttgggatggctacagcttactgtatgtggag
gggcaggagaaatcacacaaccaggatctcggttttgctggctcgtgtttgcctcgcttc
agcaccatgcccttcatttactgcaacatcaatgaggtgtgctactacgccagccgaaac
gacaagtcctactggctgtccaccactgctcccatccccatgatgcccgtggacagcgtg
cagatcccacagtacatcagccgctgctctgtgtgtgaagcaccttcccaggccgtggct
gtgcacagccaggacatcaccatcccccagtgtcccctgggctggcgcagcctstggata
ggatactccttccttatgcacacagcggcgggggcagaaggyggaggccagtcccttgtg
tcacctggctcctgcctggaggatttccgagctactccsttcatcgagtgcaatggtgcc
cggggcacgtgccactactttgccaacaagtacagcttctggctgaccacggtggagcag
gagcagcagtttgtcagcgctcctccctcagagacgctgaaagcaggacagcttcggact
cgggtcagccgctgccaggtgtgcatgaagaacttgtag
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integrated database retrieval system
