Malurus melanocephalus (red-backed fairy wren): 130573742
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Entry
130573742 CDS
T09178
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmea04121
]
130573742 (PDZRN3)
Enzymes [BR:
mmea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130573742 (PDZRN3)
Ubiquitin system [BR:
mmea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
130573742 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Sina_ZnF
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
Prok-RING_4
zf-TRAF
Tricorn_PDZ
zf-rbx1
TRAF3_RING
U-box
Motif
Other DBs
NCBI-GeneID:
130573742
NCBI-ProteinID:
XP_057222391
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MGFELDRFSGDVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVNCQRIS
TKELNHVLPLKSLILKLDIKCDNHARGCEAVVPLQHLGEHAETCDFSPAKCRNRGCRQVL
NLRDVEAHMRERCEARPAGLCEQGCGLVLTHGERRAGGHGCLRALRAHGAALQARAAALE
KALKKEALRAGKREQSLLSRLAAAQLELQVTALRYQKRFTQYSARLDALARARAASPGKG
EETKALTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDSGPAAKEGGLQIHD
RIIEVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRTPRTKAFGTAHEPQLVDASTQTDI
TFQHIMALSKMGSPSPPVPGLDPYLLPEDHPSVHEYYDPNDYMGGIHQEMDRDELELEEV
DLHRVNSQDKLGLTVCYRTDDEDDMGIYVSEIDPNSIAAKDGRLREGDRIIQINGIEVQN
REEAVALLSSEESKNISLLVARPEIQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SMLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDDSTRNDESSEQENNGDDHTTSSNTL
GSQKQLTYSHDTLGSGDMQFSNESFISADCTDVDFLGIPVDECERFRELLELKCQVKSAN
PYSLYYHNSTLEMSKSDQESVDRELEMLNEELRNIELECLNIVRAHKMQQLKEQYREPWM
LHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEMSPDNSLR
RTAEGVGCQGTEGAAAYNSSQKNSQMFAGSETHESGAGKCHTSAKEPELGKQAESKERKG
SDGSKSPTHGQKGSGSCVSPYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSL
VSMCKDLASGQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERAIKIKEERSGMTTDDDA
ISEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLECLKEQQGAEEKKEMNIIELSHK
KMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggggttcgagctggatcgcttcagcggggacgtggatcccgacttcaagtgcaacctg
tgcaacaaggtgctggaggacccgctgaccaccccgtgcggacacgtcttctgcgcgggc
tgcgtgctgccctgggtggtgcagcagggcagctgccccgtcaactgccagcgcatctcc
accaaggagctcaaccacgtcctgcccctcaagagcctcatcctcaagctggacatcaaa
tgcgacaaccacgctcggggctgcgaggcggtggtgccgctgcagcacctgggcgagcac
gccgagacctgcgacttctctccggccaagtgccgcaaccgcggctgccgccaggtgctc
aacctgcgcgacgtggaagcgcacatgcgggagcgctgcgaggcgcggccggcggggctg
tgcgagcagggctgcgggctggtgctgacccacggcgagcgccgagccggtggccacggc
tgcctgcgggctctgcgcgcacacggggccgcgctgcaggcgcgggcggccgcgctggag
aaggcgctgaagaaggaggcgctgcgcgccggcaaaagggagcagtcgctgctgtcgcgg
ctggcggcggctcagctggagctgcaggtgacggcgctgcgctaccagaagcgtttcacg
cagtacagcgcccgcctggatgcgctggcccgcgcccgcgctgcctctcccggcaagggt
gaagaaaccaaagcactgactctggtccttcaccgggactctggatctctcggattcaat
attattggtggccggccatgcgtggacaatcaggatgggtcatcgagcgaaggaattttc
gtgtccaaaatagtcgacagcgggcctgctgctaaggaaggagggctgcagatccacgac
aggattattgaggtcaatgggaaggatttatccaaagccacgcacgagcaggcrgtggag
gcgttcaagacggccaaggagcccatcgtggtgcaggtgctgcggcgaaccccgcgcacc
aaagcctttggcacagcccacgagccacagctggtggacgccagcacccagaccgacatc
accttccagcacatcatggccctcagcaagatgggctcgccgtcaccgcccgtccccggc
ctggacccctacctcctgccygaagatcatccatcygtgcatgaatactatgaccccaat
gactacatgggaggaattcatcaagaaatggaccgggatgagttggaattagaggaagtg
gatttacatagagtgaacagccaggacaagcttggcctcacagtctgttacagaacrgat
gatgaagatgacatgggtatttatgtgagtgagattgatcccaacagcatcgctgcaaaa
gacggccggctccgggaaggggatcgcattatccagatcaatggcatcgaggtgcagaac
cgagaggaagctgtggcactgctctccagtgaggagagcaagaatatctctttacttgtg
gcaagaccagaaattcagctggatgaaggatggatggatgatgacagaaacgattttctg
gatgacttgcacatggacatgttagaggaacagcaycaccaggcaatgcaatttactgcc
agcatgcttcagcagaagaagcacgaggaggacggaggcaccacagacacagccactatt
ttgtccaaccagcacgagaaggacagtggcgtggggcgcacggacgacagcacycgcaac
gacgagagctccgagcaggagaacaacggggacgatcacaccacctcctccaacaccctg
ggcagccagaagcagctgacctacagccacgacaccctggggagcggggacatgcagttc
agcaacgagtcgttcatctcggccgactgcaccgacgtcgacttcctyggcatccccgtg
gacgagtgcgagcggttccgggagctgctggagctgaagtgccaggtgaaatctgccaay
ccctacagcctctactaccacaacagcaccctggagatgagcaaaagcgaccaggagagc
gtcgacagggagctggagatgctcaacgaggagctgcgcaacatcgagctggagtgcctg
aacatcgtgagagcgcacaaaatgcagcagctgaaggagcagtaccgggagccctggatg
ctgcacaacagcggcttcaggaactacaacaccagcatcgacgtccgccggcacgagctc
tcggacatcaccgagctgcctgagaagtctgacaaggacagctcgagcgcctacaacacg
ggcgagagctgccggagcactccgctcacgctggagatgtcccccgacaattccctgcgc
agaactgcggaaggcgttggctgtcaaggtaccgagggggcagcggcgtacaacagctcc
caaaagaattcccaaatgtttgccggctcggaaacgcacgaatcsggcgctgggaaatgc
cacacctccgctaaagagcccgagcttggcaagcaagcggagagcaaggagagaaaaggc
agcgatggcagcaagagccccacgcacgggcagaaaggctcgggctcctgcgtgtccccc
taccaccactcaccctacaaacacgcccacatcccggcccaygcccagcactaccagagc
tacatgcagctgatccagcagaaatccgccgtggaatacgcwcagagccagatgagcctg
gtgagcatgtgcaaggacttggcctcgggccagagcgagcccaggatggagtggaaggtc
aaggtcaggagcgacgggacgcgctacatcaccaagaggccggtgagggacaggctgctg
agggaaagggccataaagatcaaggaggagcgtagtgggatgaccacggatgacgatgcc
atcagygagatgaagatgggccgctactggagcaaggaggagaggaarcagcacctggtg
aaagccaaggagcagaggaggcggcgrgagttcatgatgcagagcaggttggagtgccta
aaggagcagcaaggcgcagaggagaagaaagagatgaacatcattgaactgagccacaaa
aaaatgatgaagaagaggaataaaaaaatatttgacaattggatgacaatccaggaactg
ctaacccacggaacaaagtcaccggacggcacgcgggtgtacaattccttcctgtcagtg
actactgtataa
DBGET
integrated database retrieval system
