Malurus melanocephalus (red-backed fairy wren): 130573772
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Entry
130573772 CDS
T09178
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130573772 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmea03019
]
130573772 (DIS3)
Messenger RNA biogenesis [BR:
mmea03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
130573772 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Dis3l2_C_term
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
130573772
NCBI-ProteinID:
XP_057222446
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MLTSRTFVKRTRAGAVVKVVREHYLRDDIACGAAACRLCPAAPAPGTGNGNGNANGNAPG
LEARPSGPASSLCPGPHFLLPDTNLLLHQIDILEHPVIKNVIVLQTVLQEVRHRSAPVYK
RIRDVIQNPEKHFYSFTNEHHRETYIEQKRGETSNDRNDRAIRVAVKWYNEHLKKIEDEE
NIQVIFLTNDRTNKEKAVEEGITAYTCEEYIKSLTANPELVDRLACVTDEGKEIEGGKII
FPEHIPLSKLQQGIKSGIYLQGTYRASRENYLEATVWVHGDAEENKEIIVQGLKNLNRAI
HEDIVAVELLAKDEWVAPSSVVLQDDGHNEEDIENEEEKENILKTSVDKDMLRPTGRVVG
IIKRNWRPYCGMLSKSQIKEARRHLFTPADRRIPRIRIETRQADTLEGQRIIVAIDGWPR
NSRYPNGHFVKNLGSAGDKETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEEDMKHR
EDLRHLIVCSVDPPGCTDIDDALHCREIGNGNLEVGVHIADVSHFIRPGNALDEESVNRG
TTVYLCEKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHKAEILKTRFTKSVINSKAS
LTYAEAQMRIDSAAMNDEITTSLRGLNKLAKILKKRRIDNGALTLASPEVRFHMDSETHD
PIDLQTKELKETNSMVEEFMLLANISVAQKIYDEFPEFALLRKHPAPPPSNYDILVKAAK
SKNLEIKTDSAKALAESLDKAESPTFPYLNTLLRILTTRCMMQAVYFCSGMDNDFHHYGL
ASPIYTHFTSPIRRYADIIVHRLLAVAIGADSTYPELTDKHKLAEMCKNLNYRHKMAQYA
QRASVAFHTQLFFKTKGVVNEDAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPTPKLEY
NSEVPSLTVEDTTLHVFDKVKVNIMLDDSNIQHQKMRMVLVEPKILGIDVPASLSAEARS
NDEPEKKKKKLQK
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgctgacctcgcggacgttcgtgaagcgcacgcgggcgggcgcggtggtgaaggtggtg
cgcgagcattacctgcgcgacgacatcgcgtgcggcgccgccgcctgccgcctctgcccc
gccgcccccgcccccggcaccgggaacgggaatgggaacgcgaacgggaacgcgcccggg
ctggaggcgcggcccagcggccccgccagcagcctctgccccgggccacacttcctcctg
cccgacaccaacctgctcctgcaccagattgatattcttgaacatcctgttatcaagaat
gtcattgtgctgcagacagtcctgcaagaagtcagrcatcggagtgcaccagtgtacaag
cgaattagggacgtgattcaaaacccagaaaaacatttctaytctttcaccaatgagcat
cacagagaaacatacatagagcaaaagcgaggagaaacttctaacgaccgcaatgacaga
gccattcgggtagcagtgaaatggtacaatgaacacttgaagaaaatagaggatgaggag
aatattcaagttatctttttaacaaatgacagaactaataaagagaaagctgtggaggag
gggataactgcttatacgtgtgaggagtatataaaaagcttgacagctaatcctgagctt
gtagatcgtcttgcttgtgtaactgatgaagggaaagaaatagaaggcggaaaaataata
ttcccagaacatattcctcttagcaaattgcagcaaggaataaaatctggtatttacctc
caaggaacttacagggcaagcagagagaattatcttgaagctaccgtttgggttcatgga
gatgctgaagaaaacaaagagataattgtacagggactgaaaaatctaaaccgagcaatt
catgaagatattgtagctgtggagctgttggctaaagatgaatgggtggcaccatcctca
gtggtcttgcaagatgatggycataatgaagaggacattgaaaatgaagaggagaaagaa
aacattctgaagacatctgttgacaaggacatgctaaggcctacgggaagagtggtaggc
attataaaacgaaactggcggccgtattgtggcatgctttccaagtcacagatcaaggag
gcaaggcgccatttgttcacaccagctgatcgtagaattcctcgcattcgaatagagacc
agacaagcagatacattggaaggacaaaggataattgttgctattgatggttggcccaga
aattctaggtatcctaatggtcattttgtaaagaatttgggaagtgctggagataaagag
acagagacagaagttcttctgcttgaacatgatgtccctcaccaggctttttcccaggct
gtccttagtttcctaccaaaaatgccatggagcattacagaagaggatatgaaacacagg
gaggacttaaggcatctgattgtttgcagtgttgatcctcctggttgtacagatattgat
gatgcattacattgtagagaaataggaaatggaaatctagaggtcggtgtacatattgca
gatgtcagtcattttattcgcccaggraatgctttggatgaggagtcagtaaacagagga
actacagtatatctgtgtgaaaaaaggattgatatggttccagagctacttagctccaac
ttatgctccctgagatctaatgtggacaggcttgcgttttcatgcatatgggagatgaac
cataaggctgaaattctaaaaaccagatttacgaagagtgttattaactccaaggcttct
cttacgtatgctgaagcacagatgagaatcgattcagcagctatgaatgatgagattact
accagcctacgwggactaaacaaattagcaaaaattctgaagaagagaagaattgataat
ggagccttgacacttgcatcaccagaagttcgtttccacatggatagtgaaactcatgat
cctattgatctgcagactaaggaactcaaagagacaaattccatggttgaagagttcatg
ttgcttgccaatatttctgtagcacaaaaaatttatgatgagttcccagagtttgccttg
ctccgaaaacatcctgctcctcccccatcaaattatgacatccttgtgaaggctgcaaag
tccaagaatttggaaattaagacagattcagcaaaggctttagccgaatcattagataaa
gctgaatctcctacattcccctacctaaatacactgctgcgaattttgactactcgctgc
atgatgcaagctgtttatttctgctcgggaatggataatgattttcatcactatggttta
gcttcgcctatttatacccactttacctcgcctattagaaggtacgctgatatcatagtc
catcggcttttggcagtggccataggagcagacagcacttacccagaactcacagataaa
cacaaactggcagagatgtgtaaaaatctcaattaccggcataaaatggcacaatatgca
caaagagcctctgttgcrttccatacacagctgtttttcaaaaccaagggggtagtaaat
gaagatgcatatatattatttgtacgaaaaaatgcgattgtggttctgattcccaagtac
gggttagaaggaacagtcttctttgaagagaaagacaaaccaacaccaaaattggagtac
aatagtgaggtaccatcacttactgtggaagacacaacattacatgtatttgataaagtt
aaagtaaacattatgttagatgattctaatatccaacatcagaaaatgcggatggtcttg
gtggaacccaagatattaggaattgatgtgcctgcaagtctgtctgcagaggcaaggagc
aatgatgaaccagagaaaaagaaaaagaagctacaaaaatag
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