Malurus melanocephalus (red-backed fairy wren): 130573888
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Entry
130573888 CDS
T09178
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130573888 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmea03019
]
130573888 (PAN3)
Messenger RNA biogenesis [BR:
mmea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130573888 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
130573888 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Pkinase
Torus
Motif
Other DBs
NCBI-GeneID:
130573888
NCBI-ProteinID:
XP_057222662
LinkDB
All DBs
Position
Unknown
AA seq
903 aa
AA seq
DB search
MNSSGLPCSSPSPVVGPPPGAGVGVAGPAAGGAGAGGGGVKLKFCRYYAKDKTCFYGEEC
QFLHEEPGAAPAGPGPGAPPLGGLPLGIPPPAAAGPGYSAHGASSGPAAAVVGPKKAELG
AGGSGGGGGGGLDGPRLAIPGMDGSGLADANLTDSYFSTSFIGVNGFGSPAETKYPMMQR
MTNSSSSPSLLNESAKQYAGHDPLTSPNSSLFNDFAALSVSQRRKLAKPAFPSFITDLED
RYNTVLPRKYRLGMLDERIVPVGSKARKSKNPIGCLADRCKTGVPINMVWWNRVAENNLQ
TPNPSASEFIPKGGSTSRLSNVSQSSMSAFSQALFSHPSMGSPATAGLAPGMSLSAGSSP
LHSPKITPHTSPAPRRRSHTPNPANYMVPTSASASVANAVSQPPSTGPVIQKETVGGTTY
FYTDTTPAPLTGMVFPNYHIYHPAAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQ
IDQADIPAVPAEVDSYHSLFPLEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYCLRRI
HGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMMSRHF
NDPSADSYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDP
TKILVTGKTRLRVNCVGIFDVLTFDNSQNNPLALMAQFQQADLISLGKVVLALACNSLSG
IQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRN
DVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTE
AGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN
GQL
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagcggcctgccctgctcgtcgccgtcgccggtggtggggccgccgccgggg
gcgggggtcggcgtggcggggccggcggccggcggggcgggggccggcggcgggggcgtg
aagctgaagttctgccgctactacgccaaggacaagacctgcttctacggcgaggagtgc
cagttcctgcatgaggagccgggcgccgcccccgccggcccggggcccggcgccccccca
ctcggcgggctccctcttggcatccccccgcccgccgccgccgggccgggctactcggcg
cacggggccagctcgggcccggcggcagcagtggtggggcctaagaaagccgagctgggg
gcaggaggcagcggaggtggcggcggcggggggctggatggcccacggctggcgattccc
ggaatggatggcagcgggttagctgatgccaatctaacggattcttactttagcaccagc
ttcattggtgttaatggatttggaagtcctgctgaaacaaagtatcccatgatgcagagg
atgacaaatagcagcagctctcctagccttctcaatgaaagtgccaagcagtatgcaggc
catgatccactaacttcaccaaattcatccttgtttaatgacttcgctgcccttagygtg
tctcaaaggaggaagctggcaaaaccagcatttccttcgtttatcactgacttggaggac
agatataatacagtcttgcccaggaagtatcgactggggatgctggatgagaggatagtt
ccggtgggatcaaaggcaagaaaatcaaagaaccctatcggctgtctggctgacaggtgt
aaaacaggagtacccatcaatatggtttggtggaacagagtcgcagaaaacaatttacag
acaccaaatccttctgcaagtgagtttattcctaaaggaggatcaacctccaggctgagt
aatgtatcccagtcaagtatgtctgccttctctcaagccttgttctctcacccctccatg
ggaagtcctgctactgctgggctagcaccaggaatgtcactgtcagcaggatcgtctcct
cttcattcccccaaaataactcctcatacatctcctgctcctcgaagaagaagtcataca
cctaacccagcaaactatatggtgcctactagtgcctctgcgtctgtcgctaatgctgtc
tctcagcctccatctactggcccagtgatccagaaagaaacagtgggtggaacaacatac
ttctacactgatacaactccagcacctcttacaggaatggtatttccaaactaccacatc
taccatccagctgcacctcatgttgcttatatgcagccaaaagcaaatgcaccttcgttc
ttcatggcagatgagctcagacaggaacttatcaacagacatttaataactatggcccag
attgatcaggctgatattcctgcagttcctgctgaagtggacagctaccacagtctcttt
cctttggaaccactgccaccgcccaatcggatacagaaaacaagcaactttgggtacatt
acatcgtgctataaagctgtaaatagtaaagatgacctgccgtattgccttcggaggata
catggtttccgtctggttaatacgaagtgcatggtattggttgacatgtggaaaaaaatt
caacattcaaatatagtaactttgcgtgaagtgtttaccactaaagctttyggagaacat
tctctcgtgttcgcatatgattttcatgctggaggagagactatgatgagcagacacttc
aatgaccctagtgctgattcctatttcacaaaacggaaatggggtcagcatgacggacct
ctgccacggcagcatgcaggattgcttccagagtctttgatatgggcatatattgtgcag
ctcagctctgccttacggaccattcacacagcaggactagcgtgcagagttatggatcca
acaaagattctggtaacgggcaaaacaaggttacgagttaattgtgttggaatctttgat
gttttgacatttgacaacagtcaaaataatcctctagcattaatggctcagtttcagcaa
gcagatctgatctccytggggaaagttgtgttggctttggcttgcaattctttatcagga
attcagagagagaatttgcagaaagcaatggaactggtgacaatcaactattcctctgat
ctgaagaatctgattttgtatttgctgactgaccaaaacaggcttcgcagtgtaaatgat
atcatgcctatgattggtgcacgattctacactcagttggatgctgctcagatgcgaaat
gatgttatagaagaagacctagcaaaggaggtgcaaaatggaaggttgtttaggctccta
gcaaaattgggaacaatcaatgagaggccagagtttcagaaggacccaacgtggtcagaa
actggagacaggtatttactaaagctctttcgagatcaccttttccaccaggtgacagaa
gcgggtactccttggattgacctcagtcacattatctcatgtcttaacaagttagatgct
ggtgtgccagaaaaaataagcctcatttccagagatgagaagagtgtacttgtggtaact
tacagcgatttaaaacgctgctttgaaaatacttttcaagaactgattgcagccgcaaat
ggtcagttgtag
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