Malurus melanocephalus (red-backed fairy wren): 130573945
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Entry
130573945 CDS
T09178
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130573945 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmea03019
]
130573945 (FIP1L1)
Messenger RNA biogenesis [BR:
mmea03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
130573945 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
130573945
NCBI-ProteinID:
XP_057222794
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MSTGEAERLSADADGAAGDEEEEWLYGDENEAERPEEEKSSAPPPPGSEEEAAENGVVKT
KVAEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQFSYGAAPVNLNIKAGGRAYGSSGAKVK
GLDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRM
GLEILPVTSTTNKITAEDKAMEVRPSAEILDGRYHLFKVQQGRTGNLEKELAVQSTKPDF
TSPPALFKSGIPTNRRISGTIDVIGQTITISRVEGRRRANENSNIQVLSERSNPEVDSFT
KPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLI
PTIDSGHSSGYDGRSVRAFSYGSVTFPHPAGSAPSWSSLLDTSKQWDYYARREKDRERER
ERSRDRDRDRDRDRDRDRTRDRERDRDHSPSSSAFNSDEERYRYRDYAERGYDRHRTSRE
KEDRHRDRRHREKEETRHKSSRSNSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASGEPAP
EQENTEAAPVE
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggcgaggcggagcggctgtcggcggacgccgatggggccgccggggacgag
gaggaggagtggctctatggcgatgaaaatgaagcagagagaccagaggaagaaaaatct
agtgctccacccccacctggaagtgaagaggaagctgcagaaaatggcgttgtgaaaacg
aaggtggcagaggctgaggatgacagtgatagtgatagtgatgatgatgaagatgatgtt
caagtcaccataggggatattaagacaggagctccacagtttagttatggagcagcacct
gtgaatctcaatattaaggcaggaggacgagcttatggatcttctggtgcaaaagttaaa
ggactggatctagatgcaccaggaagtattaatggtgtgccacttctggaagtggattta
gattcttttgaagataaaccttggagaaagccaggggctgatctctcagattattttaat
tatggcttcaatgaagatacctggaaagcttactgtgaaaaacagaaaagaatacgaatg
ggtcttgaaatcttgccagttacctcaaccacaaataaaattacggctgaagacaaagct
atggaagtaagaccaagtgcagagattctcgatggcagataccatctttttaaggtacag
cagggcagaactggaaatttggagaaagagttggcagtgcagtcgaccaaacctgatttt
acatctcctcctgccttattcaaatcaggaattccaacaaacaggcgaatatctggcaca
atagatgtgattggacagaccatcactatcagcagggtggaaggacgacggcgtgctaat
gaaaacagcaacatacaggttctttcagaacgytctaatcctgaagtagacagttttacc
aagccacctccatttttccctccaggagctccacctacccaccttccaccacctcctttc
ctcccaccccctcccactgtcagtactgctccgcctctgattcccccaccaggtatacca
ataacagtgccaccaccaggttttccaccaccacctggcggtcctccaccttccctcata
cccacaatagacagtggacattcttctggctatgatggtcgttctgttcgtgcattttca
tatggcagtgtcacctttccacaccctgcaggttctgcaccctcatggtctagtcttctg
gacaccagcaaacagtgggattactatgcacgaagagagaaggacagagaacgtgagaga
gagagatcccgagatcgggatcgcgaccgagaccgggacagagaccgagatcgcaccaga
gatagagaaagggaccgagatcacagtccatcttcaagtgcattcaacagtgatgaagag
cgctacagatacagagactatgcagaaaggggctacgaccgccataggacaagtagagag
aaagaagacagacacagggacaggagacacagagagaaagaagagactcgacacaagtca
tctcgaagtaacagcaggcgtcgtcatgacagtgaagaaggggatagccacagaaggcac
aaacataagaagtccaaaagaagcaaagaaggaaaagaagccagtggtgaacctgctcct
gaacaggaaaacactgaagctgcccctgtggaatag
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