Malurus melanocephalus (red-backed fairy wren): 130573958
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Entry
130573958 CDS
T09178
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03020
RNA polymerase
mmea03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130573958 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
130573958 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmea03021
]
130573958 (POLR2B)
03400 DNA repair and recombination proteins [BR:
mmea03400
]
130573958 (POLR2B)
Enzymes [BR:
mmea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130573958 (POLR2B)
Transcription machinery [BR:
mmea03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
130573958 (POLR2B)
DNA repair and recombination proteins [BR:
mmea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
130573958 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
130573958
NCBI-ProteinID:
XP_057222814
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQVRVVFVCHCFTLWARGNXTCVKQDDREVNI
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcaatatgatgaagacgatgatgagatcactcccgac
ctgtggcaagaagcctgctggattgttattagctcctattttgatgaaaagggtttagtc
aggcaacagttggattcctttgatgagtttattcagatgtctgtgcagagaattgttgaa
gatgctccaccaattgatttacaagctgaagcccagcatgcctcaggagaagtggaagag
ccgccccggtatctgttgaagtttgagcaaatctatctctccaaacctacacattgggaa
agagatggagcaccctcacctatgatgccaaatgaagccaggctgagaaaccttacgtat
tctgcccccttgtatgtggatataactaaaacagttattaaagaaggggaagaccaattg
cagacccagcatcagaaaaccttcatagggaaaattcccatcatgttgcgttccacgtac
tgtttgctgaatggcttaactgaccgtgatctttgtgagctgaatgagtgcccccttgat
cctggtggttacttcatcattaatggatcagaaaaggttctgatcgctcaggagaaaatg
gctacaaacacagtgtatgtgtttgcaaagaaagattcaaartatgcctacacaggagag
tgtagatcttgtctggaaaactcctctcgaccaacaagtactatatgggtcagcatgctg
gccagaggtggacagggtgcaaagaagagtgccattggtcagcgcattgtagcaactttg
ccatatattaaacaagaggtccccatcatcattgtcttccgtgcacttggctttgtgtcy
gacagggacattctagagcacatcatatatgattttgaagacccagaaatgatggaaatg
gtcaagccttctctggatgaagcatttgtcattcaggagcaaaatgttgctctaaacttc
attggctcaagaggtgccaagccaggtgtcacaaaagaaaagagaatcaagtatgctaaa
gaagtcttgcagaaagaaatgctcccacatgttggtgtcagtgacttctgtgaaaccaaa
aaggcctattttctagggtatatggttcatagattgttgctggcagcmctgggaagaaga
gagctggatgacmgagatcattatggcaacaaaagactggatcttgctgggccactgttg
gctttcctgttcagaggaatgttcaagaatttgctgaaggaagtgagaatatatgcacaa
aagtttattgacagagggaaagatttcaacttggaattggcaatcaaaacaagaattatt
tcagatggtttraaatattcattggcaactggaaactggggtgaccagaagaaagctcat
caggccagagcaggagtatctcaggtgttgaaccgcctgacttttgcatccacactttcc
cacctgagacgcctgaattctcccattgggagagatggcaaactggccaagccccggcag
ctgcacaacaccctctggggaatggtttgccctgctgagacccctgagggtcatgcagta
ggacttgtgaagaacttagccctgatggcttacatttctgtggggtctcagccatcccca
attttggaattcttggaggagtggagtatggaaaacctagaagaaatatctccagcagca
atagctgatgctaccaagatctttgttaatggctgctgggtaggaatacacaaagatcca
gagcagctcatgaataccctaaggaagcttcgtcgtcagatggacatcattgtatcagag
gtctcgatgatcagagatattcgtgagcgggaaatccgcatctacactgatgcrggcaga
atttgtcggccccttttgattgtggagaaacaaaagttgctgctgaagaaaaggcacatt
gaccaactgaaggagcgagagtataacaactacagttggcaggatcttgtggccagtggt
gtagtagagtacattgacaccctggaagaagagactgtgatgctggcaatgactccagat
gacttgcaagagaaaggtgtggcatattgttcaacatacacrcactgtgagattcaccca
tccatgatcctgggagtgtgtgcatctattatccctttccctgatcacaaccagtctccc
aggaacacataccagtctgctatgggtaaacaagctatgggagtctacattaccaacttc
catgtccgtatggatacrctggcacatgtgttgtattatccccagaagcccctggtgaca
acacgctccatggagtacttgagatttagagagttaccagcaggtatcaactcgattgta
gccattgcatcatacacaggctataaccaggaagactctgtcatcatgaaccgttctgct
gttgacagaggctttttcagatctgtgttctatcgctcatacaaagagcaggagtctaag
aaagggtatgaccaagaggaagtttttgaaaagcccacacgtgaaacctgccaaggtatg
agacacgccatctatgacaaacttgatgatgatggtttgatagcccctggggtacgtgtg
tctggggatgatgtcatcattggcaaaacagtcaccctgccagaaaacgaagatgagctg
gaaagcaccaacagacgcttcaccaagagagactgcagcaccttcctgcggaccagtgag
actgggattgtagatcaggtcatggtaaccctgaaccaggaaggatacaagttctgcaag
attagggtacgttctgtaagaattccacaaattggagataaatttgctagcagacatggt
cagaaaggaacctgtggtatccagtacaggcaagaggatatgcccttcacgtgtgaaggc
atcacacctgatatcattatcaacccccatgccatcccttcccgtatgaccattggtcac
ttgattgagtgtcttcagggcaaggtatctgcaaacaagggagaaattggtgatgccaca
ccttttaatgatgctgtcaacgtgcagaagatttccaatcttttatcagattatggctac
catctaagaggaaatgaggtcctctacaatggcttcactggtcgaaaaatcacatcccag
atcttcattggtcctacctattaccagcgtttgaagcacatggtagatgacaaaatccat
tctcgtgcacgagggccaatccagatccttaacaggcagcccatggaaggcagatctcgt
gatggtggccttcgctttggagaaatggaacgagattgccagattgctcatggagcagcc
cagttcttgagagaaagattgtttgaagcttcagacccataccaagtccatgtgtgtaac
ctctgtggaatcatggcaattgcaaacacgaggactcacacctaygaatgccgagggtgc
cgtaataaaactcaggtacgtgtggtttttgtctgccattgttttaccttgtgggcaaga
ggaaatgscacttgtgtgaagcaggatgatagggaagtaaatatttaa
DBGET
integrated database retrieval system
