Malurus melanocephalus (red-backed fairy wren): 130573974
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Entry
130573974 CDS
T09178
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04510
Focal adhesion
mmea04512
ECM-receptor interaction
mmea04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130573974 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130573974 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130573974 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmea04147
]
130573974 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
mmea00536
]
130573974 (COL4A3)
Exosome [BR:
mmea04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
130573974 (COL4A3)
Glycosaminoglycan binding proteins [BR:
mmea00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130573974 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
130573974
NCBI-ProteinID:
XP_057222841
LinkDB
All DBs
Position
Unknown
AA seq
1814 aa
AA seq
DB search
MAGGGCPGRLAPVLLLALLWPGRAAAEVSERRDGAVARGPAAAAADLGQSGFGPAVPAVT
ALRWPLLRGRDGTGCDAGSXPPPAREAAAEARPAGTGDVDGEDGAMLGVDGPRGKHLRSG
TYRLDHLFTFMTKSFFRLSFSWKKSSRLWRYPGRCSSQRFWQLPNRKLPVSNCVCKGKSP
CLCDSAKGSKGEKGFPGVPGPPGQRGFPGPEGPPGPQGPKGSPGPMGLVGPKGTRGIPGI
PGFSGPPGLPGEPGTVGPPGLPGVPGCNGTKGDQGFPGPPGQRGPPGFPGIAGIKGEKGC
PAEGYSQEYGEKGDPGLPGMPGLQGAQGAQGYPGELGPQGPPGPLGMPGKAGPPGPKGLM
GLKVIGAKGRKGDTGLTGPPGPPGTVIVTLSGPDNMTDLKGEKGDKGSRGLPGPMGFTGP
VGDSQSEKGDXGEPGAEGKPGKEGAPGPPGLPGQKGEQGKPGLAGRQGAKGMKGNTGPPG
ARGRTEYYDYVAGEKGDEGPPGPPGPKGQRGMPGPQGPPGAAGRPGVSRPGLRGPPGFPG
PKGTKGEKGQTGLCIVGPPGLPGIXGRPGSVGLPGPPGEPGRVTFGTSLPGLPGEPGCIG
PPGPPGDTGMKGDDAPVCTDCSYIPGIPGLPGSPGPRGQDGMPGSEGATGPKGSPGSPGA
PGFPGTQGPPGFRGDQGRKGSKGDPGYVYPEGPKGEQGDPGVSGDKGRRGSSGFLGRPGS
KGSKGSKGEEGLAGPKGDRGLPGLPGRPGLPGEIGLPGPPGYGPQGIRGFKGSKGIPGLP
GLPGEAGLKGETSRAAPLPALPGPQGPHGLPGPPGAPGRVGARGQPGDPGHSGPTGDTGF
PGLGFPGNPGPKGDKGLAGGRGPPGFEGKTGDPGRAGNLGQPGQKGDPGMVIPGEPGRMG
SPGGHGSPGSKGEGGLPGLPGLPGHPGHDGDDGLRGDRGSPGVPGDPGFPGKPAECLIGL
PGLPGGQGATGPPGGRGLQGSKGNPGPPGLSVPGIYGRPGEPGLIGLQGNMGLPGPKGQS
GRPGISGLPGSRGDPGITGLLGIPGPPGMAGRPGNPGIRGSPGFPGIKGRKGFLGEKGDP
GDKGFPGPSETLVAIGDKGERGLKGVQGQMGLRGEKGDVGVQGPPGADGSEGMPGVPGVK
GFMGLPGIPGRQGFPGAHGDKGNMGMPGPKGQKGAPGFPGPAGDPGPPGYAGFPGDKGDP
GYPSAGPPGEPGPKGDPGPPGGFGSKGERGSQGHPGLTGVPGPHGIRGETGGAGIPGKCG
PPGAIGVKGCQGRPGQQGVPGPPGAVGVPGKHGLTGERGTQGQDGMPGPPGVKGEPGPPG
RGIPGLRGVPGRRGIKGDMGLPGFPGPPGVKGQQGDRGPIGPPGLMGLPGFQGTTGMAVT
GQKGSRGSPGAHGRPGAPGFPGLPGLSTPSVKGSKGVRGADGIPGPRGPAGDIGPPGPKG
IEGRSGYPGARGEPGFLGFPGVKGEKGNQGPPGPQGAEGPRGPKGQHGXPGVSGKIFSIP
GSKGPPGLPGIXGTPGDQGIQGIPGPQGPKGVKGLPGSFGHPGHPGLPGPKGDRGFPGXR
GQPGLIGFPGLQGLPGSPGTIIAGPTRRGFIFTRHSQTTRIPSCPHGTSQIYIGYSLLFV
QGNERAHGQDLGTAGSCLQRFTTMPFLFCSTNDVCSFASRNDYSYWLSTAVVMPPDMAPI
SGRALEPHISRCVVCEGAAMVIAVHSQTTVVPACPDGWMSLWKGFSFVMYTSAGSEASGQ
ALASPGSCLEEFRAVPFIECHGRGTCNYYTNSYSFWLASLNPRRMFRRPVPQTLKAGELE
NIISRCQVCMKRPV
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgggggctgcccgggccgcctggcgccggtgctgctgctcgccctgctctgg
ccgggccgcgccgcggcggaggtgagtgagcgccgggacggggcggtggcgcggggtccc
gcggcggctgcggctgacctggggcagagcgggttcggccctgcggtccctgctgtcact
gcgctgcgttggccgctgctgaggggacgggacgggacggggtgcgatgctggctccgya
ccgccaccagctcgggaagcggccgcggaggcccggcctgcgggcacaggggatgtggac
ggcgaggacggagcgatgttgggagtggatggtccccgaggaaaacacctccggagcggc
acttaccgtctggatcacctcttcaccttcatgacaaaatcatttttcagattgtctttc
agctggaagaagagcagtcggctctggaggtacccaggtcggtgtagctcgcaacgcttc
tggcagttaccaaacagaaaactgcccgtttcaaactgtgtatgcaaaggtaaaagtccc
tgcctttgtgacagcgcgaaaggtagtaagggtgaaaaaggctttcctggtgttccaggt
ccacctggtcaaagaggctttcctggtccagaagggcctcctgggccacagggaccaaag
ggttctccagggcctatgggcttagttggacccaaaggtacacgaggaatcccaggaata
cccggattttcaggtcctccaggccttccaggtgaaccaggaactgttggtcctcctggg
ctcccaggtgttccaggatgcaacggcacaaagggtgaccaaggatttccaggtcctcca
ggtcaaagaggtcctccaggctttccaggtattgctggtatcaaaggagagaaggggtgc
cctgcagaaggatatagccaagagtatggtgaaaaaggtgatcctggattaccaggaatg
cctggtctccagggtgcccagggtgctcaaggatatcctggggaacttggaccacagggc
cctccaggacctttaggcatgccagggaaagcaggacctcctggacctaagggtcttatg
ggactgaaagtaataggagccaaaggaagaaagggtgacactggattaactggaccccct
ggacccccaggaactgttattgtgacattaagtggaccagacaacatgacggacttgaaa
ggagaaaaaggagacaaaggatcaagaggactcccggggccaatggggtttacaggtcca
gttggtgattctcaaagtgaaaagggtgaccraggagaaccaggagcagaggggaaacct
ggaaaagaaggtgccccaggaccacctggcttaccgggacaaaagggtgaacagggcaag
ccaggactggctggaagacaaggagctaaggggatgaaaggaaatactggtccacctgga
gcccgtggtcgaacggagtattatgattatgtggctggtgaaaaaggrgatgaaggaccc
cccggacctccaggaccaaaaggtcaacgtggcatgcctgggccacagggtcctcctgga
gctgctggtaggccaggtgtgtcaagacctggtctgagaggtcccccaggatttcctggg
ccaaaaggaacaaagggcgagaaaggacaaactggcttgtgtattgtaggccctccagga
ctgcctggtattrctggcaggcctggttctgttggattaccaggtcctccaggagaacca
ggtagagtaacatttggaacaagcctaccaggscttcctggagagccagggtgtatagga
cctccgggacctccaggagatactggcatgaaaggtgatgatgctcctgtgtgtactgat
tgcagctatattccgggaatacctggtcttcctggttctcctgggcctcgtggtcaggat
ggcatgcctggtagtgaaggagcaacaggtccaaaaggttctccgggttctccaggagca
ccagggttcccagggactcaaggacctccaggttttagaggagatcaaggacgtaaagga
tcaaaaggtgatccaggatatgtatatccagaagggccaaaaggtgagcaaggagatcca
ggagtcagcggagacaaaggaagaagaggttcaagtggatttttgggaagacctggctct
aaaggatccaagggttctaaaggtgaagagggattggctggaccaaaaggagatagaggg
ttacctggattgcctggtagacctggtcttcctggagaaatyggccttcctggaccacca
gggtatggaccacaaggaataagaggttttaaaggctctaaaggaatacctggactacct
ggattacctggagaagctggcctgaaaggagagaccagtagggcagctcctttacctgca
ttgccaggacctcaaggaccacatggtttacctggacccccaggagcacctggtagggtt
ggagcaagaggtcagccaggtgacccaggacattcaggaccaacaggtgacacaggcttt
ccagggcttgggtttcctggaaaccctggtccaaaaggagataaaggacttgcaggaggc
agagggccaccaggttttgaaggaaagactggagatccaggccgagcaggaaacctagga
caaccaggacaaaagggtgacccaggcatggttattcctggagagccaggaagaatgggt
tcaccaggaggtcatggcagtccaggctcaaaaggtgaaggtggccttccaggactacca
ggcctaccaggacatcctggacatgatggtgatgatggcctaagaggagatcgtggctca
cckggagttcctggagacccaggttttccagggaaacctgctgagtgtcttattggcctg
ccaggtttgccaggtggccagggagctacaggcccaccaggaggaagaggtttacaaggt
tcaaaaggaaacccaggtcctcctggtttgagtgtcccaggaatctatggaaggcctggg
gaacctggattgataggtcttcagggaaatatgggattacctggtcccaagggacagtct
ggaaggccaggaatctctggtttgccaggctcaagaggagacccaggtataacgggactg
ttaggaattcctggaccccctggcatggctggaagaccgggcaacccgggtatcagaggt
tctcctggattcccaggaataaagggaagaaaagggtttctaggagaaaaaggcgacccg
ggtgataaaggatttcctggaccatctgaaaccttggttgctattggggacaaaggagaa
cgaggtttgaaaggagttcaaggccaaatgggtctgaggggagaaaaaggagatgtyggt
gtgcaaggtcccccaggtgctgatgggtctgaaggaatgcctggtgtaccaggggtcaaa
ggatttatgggtcttccagggattcctggcagacaaggattcccaggagcacatggagac
aaagggaacatgggaatgccaggtccaaaaggccagaaaggagctccaggctttccagga
ccagcaggtgaccctggtcctccaggctatgctggctttccgggtgacaaaggagatcct
gggtacccatctgctgggcctccaggagaacccggtccaaagggagatccaggcccccca
ggaggttttggcagcaaaggggaaagaggatcacagggtcatccaggacttacaggagtg
ccaggaccacatgggatcagaggggaaactggaggtgcaggaattccaggaaagtgtgga
ccccctggagctattggtgttaaaggatgycagggtcgcccaggacagcagggagtccca
ggccctcctggtgctgttggagtccctggaaaacatggacttactggtgaaagaggtact
caaggtcaagatggtatgcctggtcccccaggagtaaagggagaaccaggaccaccaggg
agggggatccctggccttcgaggtgttcctggccgtagaggaatcaaaggggacatggga
ctgcctggttttcctgggcctccaggtgtgaaaggtcaacaaggtgatcgaggacccatt
ggacctcctggcttaatggggttacctggatttcaaggcaccacaggcatggcagtcact
ggccagaaaggaagcagaggtagtccaggtgcacatggaagaccaggtgctccgggtttt
ccaggacttcctggtctttccactcccagcgtgaaaggaagcaaaggtgtcagaggggca
gatggcattccagggccaaggggcccagctggtgacattggtcctcctggtcccaaagga
atagaaggtcgatcaggctatcctggtgctagaggggaacctggatttcttggattccca
ggtgtaaaaggagaaaagggtaatcaaggaccccctggaccacaaggtgcagaagggcca
cggggaccaaagggccagcatggttyacctggagtctctgggaaaatattctccatccca
ggaagcaagggtcctccaggactgcctggaatcsctggaacaccaggtgatcaaggaatt
caagggattcctggaccacaaggacccaaaggagtaaaaggtctaccaggaagttttggt
catccaggtcatccaggactgcctggaccaaaaggagacaggggatttccaggacyaaga
ggacaacctggactgattggctttccaggtctgcaggggttacctggatcaccaggtact
atcattgctggtcccacaagaagaggatttatctttacccggcatagtcaracaacaagg
attccttcatgcccacacgggacatcccagatctatattggctattcactgctttttgta
caaggaaatgaacgagcacatggacaagatcttggaacagctggtagctgcttgcagaga
ttcaccaccatgccattcttgttctgtagcaccaacgatgtttgtagctttgcttctcgc
aatgactactcatactggctgtccactgcagtggtgatgccaccagacatggcacccatt
tctggcagggcactrgagccccatataagcaggtgtgttgtctgtgaaggagctgcaatg
gtaatagcagttcacagccaaacaactgtagttcctgcrtgtccagatggctggatgtct
ctctggaagggtttttcttttgttatgtacacaagtgcgggctcagaagcttctggccaa
gcattggcatctcctggatcttgcctggaagaatttcgggccgtcccattcatagagtgc
catggcagggggacgtgcaactactacacaaattcctacagcttctggttggcatcatta
aatccaagaagaatgttcaggagacctgtgccacagactttaaaagcaggagaactagaa
aatatcatcagtcgttgtcaggtctgcatgaagagaccagtataa
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integrated database retrieval system
