Malurus melanocephalus (red-backed fairy wren): 130573974
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Entry
130573974 CDS
T09178
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04382
Cornified envelope formation
mmea04510
Focal adhesion
mmea04512
ECM-receptor interaction
mmea04518
Integrin signaling
mmea04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130573974 (COL4A3)
04518 Integrin signaling
130573974 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130573974 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130573974 (COL4A3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130573974 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmea04147
]
130573974 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
mmea00536
]
130573974 (COL4A3)
Exosome [BR:
mmea04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
130573974 (COL4A3)
Glycosaminoglycan binding proteins [BR:
mmea00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130573974 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
130573974
NCBI-ProteinID:
XP_057222841
LinkDB
All DBs
Position
Unknown
AA seq
1814 aa
AA seq
DB search
MAGGGCPGRLAPVLLLALLWPGRAAAEVSERRDGAVARGPAAAAADLGQSGFGPAVPAVT
ALRWPLLRGRDGTGCDAGSXPPPAREAAAEARPAGTGDVDGEDGAMLGVDGPRGKHLRSG
TYRLDHLFTFMTKSFFRLSFSWKKSSRLWRYPGRCSSQRFWQLPNRKLPVSNCVCKGKSP
CLCDSAKGSKGEKGFPGVPGPPGQRGFPGPEGPPGPQGPKGSPGPMGLVGPKGTRGIPGI
PGFSGPPGLPGEPGTVGPPGLPGVPGCNGTKGDQGFPGPPGQRGPPGFPGIAGIKGEKGC
PAEGYSQEYGEKGDPGLPGMPGLQGAQGAQGYPGELGPQGPPGPLGMPGKAGPPGPKGLM
GLKVIGAKGRKGDTGLTGPPGPPGTVIVTLSGPDNMTDLKGEKGDKGSRGLPGPMGFTGP
VGDSQSEKGDXGEPGAEGKPGKEGAPGPPGLPGQKGEQGKPGLAGRQGAKGMKGNTGPPG
ARGRTEYYDYVAGEKGDEGPPGPPGPKGQRGMPGPQGPPGAAGRPGVSRPGLRGPPGFPG
PKGTKGEKGQTGLCIVGPPGLPGIXGRPGSVGLPGPPGEPGRVTFGTSLPGLPGEPGCIG
PPGPPGDTGMKGDDAPVCTDCSYIPGIPGLPGSPGPRGQDGMPGSEGATGPKGSPGSPGA
PGFPGTQGPPGFRGDQGRKGSKGDPGYVYPEGPKGEQGDPGVSGDKGRRGSSGFLGRPGS
KGSKGSKGEEGLAGPKGDRGLPGLPGRPGLPGEIGLPGPPGYGPQGIRGFKGSKGIPGLP
GLPGEAGLKGETSRAAPLPALPGPQGPHGLPGPPGAPGRVGARGQPGDPGHSGPTGDTGF
PGLGFPGNPGPKGDKGLAGGRGPPGFEGKTGDPGRAGNLGQPGQKGDPGMVIPGEPGRMG
SPGGHGSPGSKGEGGLPGLPGLPGHPGHDGDDGLRGDRGSPGVPGDPGFPGKPAECLIGL
PGLPGGQGATGPPGGRGLQGSKGNPGPPGLSVPGIYGRPGEPGLIGLQGNMGLPGPKGQS
GRPGISGLPGSRGDPGITGLLGIPGPPGMAGRPGNPGIRGSPGFPGIKGRKGFLGEKGDP
GDKGFPGPSETLVAIGDKGERGLKGVQGQMGLRGEKGDVGVQGPPGADGSEGMPGVPGVK
GFMGLPGIPGRQGFPGAHGDKGNMGMPGPKGQKGAPGFPGPAGDPGPPGYAGFPGDKGDP
GYPSAGPPGEPGPKGDPGPPGGFGSKGERGSQGHPGLTGVPGPHGIRGETGGAGIPGKCG
PPGAIGVKGCQGRPGQQGVPGPPGAVGVPGKHGLTGERGTQGQDGMPGPPGVKGEPGPPG
RGIPGLRGVPGRRGIKGDMGLPGFPGPPGVKGQQGDRGPIGPPGLMGLPGFQGTTGMAVT
GQKGSRGSPGAHGRPGAPGFPGLPGLSTPSVKGSKGVRGADGIPGPRGPAGDIGPPGPKG
IEGRSGYPGARGEPGFLGFPGVKGEKGNQGPPGPQGAEGPRGPKGQHGXPGVSGKIFSIP
GSKGPPGLPGIXGTPGDQGIQGIPGPQGPKGVKGLPGSFGHPGHPGLPGPKGDRGFPGXR
GQPGLIGFPGLQGLPGSPGTIIAGPTRRGFIFTRHSQTTRIPSCPHGTSQIYIGYSLLFV
QGNERAHGQDLGTAGSCLQRFTTMPFLFCSTNDVCSFASRNDYSYWLSTAVVMPPDMAPI
SGRALEPHISRCVVCEGAAMVIAVHSQTTVVPACPDGWMSLWKGFSFVMYTSAGSEASGQ
ALASPGSCLEEFRAVPFIECHGRGTCNYYTNSYSFWLASLNPRRMFRRPVPQTLKAGELE
NIISRCQVCMKRPV
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgggggctgcccgggccgcctggcgccggtgctgctgctcgccctgctctgg
ccgggccgcgccgcggcggaggtgagtgagcgccgggacggggcggtggcgcggggtccc
gcggcggctgcggctgacctggggcagagcgggttcggccctgcggtccctgctgtcact
gcgctgcgttggccgctgctgaggggacgggacgggacggggtgcgatgctggctccgya
ccgccaccagctcgggaagcggccgcggaggcccggcctgcgggcacaggggatgtggac
ggcgaggacggagcgatgttgggagtggatggtccccgaggaaaacacctccggagcggc
acttaccgtctggatcacctcttcaccttcatgacaaaatcatttttcagattgtctttc
agctggaagaagagcagtcggctctggaggtacccaggtcggtgtagctcgcaacgcttc
tggcagttaccaaacagaaaactgcccgtttcaaactgtgtatgcaaaggtaaaagtccc
tgcctttgtgacagcgcgaaaggtagtaagggtgaaaaaggctttcctggtgttccaggt
ccacctggtcaaagaggctttcctggtccagaagggcctcctgggccacagggaccaaag
ggttctccagggcctatgggcttagttggacccaaaggtacacgaggaatcccaggaata
cccggattttcaggtcctccaggccttccaggtgaaccaggaactgttggtcctcctggg
ctcccaggtgttccaggatgcaacggcacaaagggtgaccaaggatttccaggtcctcca
ggtcaaagaggtcctccaggctttccaggtattgctggtatcaaaggagagaaggggtgc
cctgcagaaggatatagccaagagtatggtgaaaaaggtgatcctggattaccaggaatg
cctggtctccagggtgcccagggtgctcaaggatatcctggggaacttggaccacagggc
cctccaggacctttaggcatgccagggaaagcaggacctcctggacctaagggtcttatg
ggactgaaagtaataggagccaaaggaagaaagggtgacactggattaactggaccccct
ggacccccaggaactgttattgtgacattaagtggaccagacaacatgacggacttgaaa
ggagaaaaaggagacaaaggatcaagaggactcccggggccaatggggtttacaggtcca
gttggtgattctcaaagtgaaaagggtgaccraggagaaccaggagcagaggggaaacct
ggaaaagaaggtgccccaggaccacctggcttaccgggacaaaagggtgaacagggcaag
ccaggactggctggaagacaaggagctaaggggatgaaaggaaatactggtccacctgga
gcccgtggtcgaacggagtattatgattatgtggctggtgaaaaaggrgatgaaggaccc
cccggacctccaggaccaaaaggtcaacgtggcatgcctgggccacagggtcctcctgga
gctgctggtaggccaggtgtgtcaagacctggtctgagaggtcccccaggatttcctggg
ccaaaaggaacaaagggcgagaaaggacaaactggcttgtgtattgtaggccctccagga
ctgcctggtattrctggcaggcctggttctgttggattaccaggtcctccaggagaacca
ggtagagtaacatttggaacaagcctaccaggscttcctggagagccagggtgtatagga
cctccgggacctccaggagatactggcatgaaaggtgatgatgctcctgtgtgtactgat
tgcagctatattccgggaatacctggtcttcctggttctcctgggcctcgtggtcaggat
ggcatgcctggtagtgaaggagcaacaggtccaaaaggttctccgggttctccaggagca
ccagggttcccagggactcaaggacctccaggttttagaggagatcaaggacgtaaagga
tcaaaaggtgatccaggatatgtatatccagaagggccaaaaggtgagcaaggagatcca
ggagtcagcggagacaaaggaagaagaggttcaagtggatttttgggaagacctggctct
aaaggatccaagggttctaaaggtgaagagggattggctggaccaaaaggagatagaggg
ttacctggattgcctggtagacctggtcttcctggagaaatyggccttcctggaccacca
gggtatggaccacaaggaataagaggttttaaaggctctaaaggaatacctggactacct
ggattacctggagaagctggcctgaaaggagagaccagtagggcagctcctttacctgca
ttgccaggacctcaaggaccacatggtttacctggacccccaggagcacctggtagggtt
ggagcaagaggtcagccaggtgacccaggacattcaggaccaacaggtgacacaggcttt
ccagggcttgggtttcctggaaaccctggtccaaaaggagataaaggacttgcaggaggc
agagggccaccaggttttgaaggaaagactggagatccaggccgagcaggaaacctagga
caaccaggacaaaagggtgacccaggcatggttattcctggagagccaggaagaatgggt
tcaccaggaggtcatggcagtccaggctcaaaaggtgaaggtggccttccaggactacca
ggcctaccaggacatcctggacatgatggtgatgatggcctaagaggagatcgtggctca
cckggagttcctggagacccaggttttccagggaaacctgctgagtgtcttattggcctg
ccaggtttgccaggtggccagggagctacaggcccaccaggaggaagaggtttacaaggt
tcaaaaggaaacccaggtcctcctggtttgagtgtcccaggaatctatggaaggcctggg
gaacctggattgataggtcttcagggaaatatgggattacctggtcccaagggacagtct
ggaaggccaggaatctctggtttgccaggctcaagaggagacccaggtataacgggactg
ttaggaattcctggaccccctggcatggctggaagaccgggcaacccgggtatcagaggt
tctcctggattcccaggaataaagggaagaaaagggtttctaggagaaaaaggcgacccg
ggtgataaaggatttcctggaccatctgaaaccttggttgctattggggacaaaggagaa
cgaggtttgaaaggagttcaaggccaaatgggtctgaggggagaaaaaggagatgtyggt
gtgcaaggtcccccaggtgctgatgggtctgaaggaatgcctggtgtaccaggggtcaaa
ggatttatgggtcttccagggattcctggcagacaaggattcccaggagcacatggagac
aaagggaacatgggaatgccaggtccaaaaggccagaaaggagctccaggctttccagga
ccagcaggtgaccctggtcctccaggctatgctggctttccgggtgacaaaggagatcct
gggtacccatctgctgggcctccaggagaacccggtccaaagggagatccaggcccccca
ggaggttttggcagcaaaggggaaagaggatcacagggtcatccaggacttacaggagtg
ccaggaccacatgggatcagaggggaaactggaggtgcaggaattccaggaaagtgtgga
ccccctggagctattggtgttaaaggatgycagggtcgcccaggacagcagggagtccca
ggccctcctggtgctgttggagtccctggaaaacatggacttactggtgaaagaggtact
caaggtcaagatggtatgcctggtcccccaggagtaaagggagaaccaggaccaccaggg
agggggatccctggccttcgaggtgttcctggccgtagaggaatcaaaggggacatggga
ctgcctggttttcctgggcctccaggtgtgaaaggtcaacaaggtgatcgaggacccatt
ggacctcctggcttaatggggttacctggatttcaaggcaccacaggcatggcagtcact
ggccagaaaggaagcagaggtagtccaggtgcacatggaagaccaggtgctccgggtttt
ccaggacttcctggtctttccactcccagcgtgaaaggaagcaaaggtgtcagaggggca
gatggcattccagggccaaggggcccagctggtgacattggtcctcctggtcccaaagga
atagaaggtcgatcaggctatcctggtgctagaggggaacctggatttcttggattccca
ggtgtaaaaggagaaaagggtaatcaaggaccccctggaccacaaggtgcagaagggcca
cggggaccaaagggccagcatggttyacctggagtctctgggaaaatattctccatccca
ggaagcaagggtcctccaggactgcctggaatcsctggaacaccaggtgatcaaggaatt
caagggattcctggaccacaaggacccaaaggagtaaaaggtctaccaggaagttttggt
catccaggtcatccaggactgcctggaccaaaaggagacaggggatttccaggacyaaga
ggacaacctggactgattggctttccaggtctgcaggggttacctggatcaccaggtact
atcattgctggtcccacaagaagaggatttatctttacccggcatagtcaracaacaagg
attccttcatgcccacacgggacatcccagatctatattggctattcactgctttttgta
caaggaaatgaacgagcacatggacaagatcttggaacagctggtagctgcttgcagaga
ttcaccaccatgccattcttgttctgtagcaccaacgatgtttgtagctttgcttctcgc
aatgactactcatactggctgtccactgcagtggtgatgccaccagacatggcacccatt
tctggcagggcactrgagccccatataagcaggtgtgttgtctgtgaaggagctgcaatg
gtaatagcagttcacagccaaacaactgtagttcctgcrtgtccagatggctggatgtct
ctctggaagggtttttcttttgttatgtacacaagtgcgggctcagaagcttctggccaa
gcattggcatctcctggatcttgcctggaagaatttcgggccgtcccattcatagagtgc
catggcagggggacgtgcaactactacacaaattcctacagcttctggttggcatcatta
aatccaagaagaatgttcaggagacctgtgccacagactttaaaagcaggagaactagaa
aatatcatcagtcgttgtcaggtctgcatgaagagaccagtataa
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integrated database retrieval system
