Malurus melanocephalus (red-backed fairy wren): 130574000
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Entry
130574000 CDS
T09178
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130574000 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmea04121
]
130574000 (TRIP12)
Enzymes [BR:
mmea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130574000 (TRIP12)
Ubiquitin system [BR:
mmea04121
]
Ubiquitin ligases (E3)
HECT type E3
130574000 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
130574000
NCBI-ProteinID:
XP_057222894
LinkDB
All DBs
Position
Unknown
AA seq
2066 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHFSKRGCSSSAVLIPQQEDPERVNTSEKQKTGQVPKKDNSRGVKRSASPD
YRRTNSPSSAKKPKALQHTETSPEANKPHTKSKRRHSDQEQPKSTQLPSTSKAHTRKGGA
AGSSRSQKRKRTENLSCIKSGSSVESTGTEEKSAKVSKLASKSVTSAKAGCSTITDSSSS
ASTSSSSSAVASASSTVPQGARVKQGKDQSKARRSRSASSPSPRRSSRDKEPSKTGGSSK
FDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPS
LRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEPPQG
AAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGS
GASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVR
MFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICE
LMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDE
ISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSELKKDDARAQLMKE
DPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSH
IASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKV
CTNGSGTLGTTTTISTGTATAASNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLP
KRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPAR
TAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVEHYFSSENMDGSNPALNVLQRLCTA
TEQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRL
KRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTG
SSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRG
YGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQY
SLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKT
SPRNSKKHDELWHDGVCPSVLNPLEIYLISTPPENITFEDPSLDVILLLRVLHAISRYWY
YLYDNAVCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDT
RQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQAESVM
QDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEG
TKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWM
LRQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALEALTMNGCS
VEDLGLDFTLPGFPNIELKKGGKDTPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGFE
SVFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSF
DSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLP
DYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttttctaaaagaggctgtagttcatct
gctgttttaataccacaacaagaagatccagagagagtcaatacttcagaaaagcaaaaa
acggggcaagtgcctaagaaagacaattctcgaggagttaaacgcagtgctagtccagat
tacaggaggaccaattctcctagctctgctaaaaaacccaaagcacttcaacacactgaa
acttccccggaagctaacaagccacatactaaatctaagagaagacactcagaccaagag
cagcccaagtctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagct
gctggtagctcccgaagtcagaaaaggaaaaggacagagaatctgtcttgtataaagagt
gggtcatcagttgaatcaactggcactgaagaaaagtcagcaaaagtctccaagctggct
tcaaaatcggtgacctcagccaaagctgggtgtagcaccatcaccgattcttcttcttca
gcttccacctcctcctcctcttctgctgttgcctctgcttcttctactgttcctcagggt
gccagagtgaaacagggaaaggaccagagtaaggctagacgttcccgttctgcatccagc
cccagtccaagaaggagtagcagggacaaagaaccgagtaaaacaggtggctcttcgaag
tttgactgggctgctcgattcagcccaaaagtcagtctgcctaaaacaaaactgtctcta
ccaggctcttccaagtcggagacatcaaaacctggaccttcaggactacaggctaagcta
gcaagtctaagaaaatctacaaagaagcgcagtgaatcaccacctgctgagctccccagt
ttacggcggagcacacggcaaaagaccacgggctcctgtgctagcaccagtcggcgaggc
tctggcctgggcaaaagaggagcagctgaagctcgccgacaggagaagatggctgatcct
gacaacaaccaggatggagttaactcttcagctgcccgaacagatgagcctccccaggga
gctgcagcttctagytctgttgctggagctgtaggtatgacaacttctggagaaagtgag
tcagatgattctgagatgggaagactacaagctctattagaggctaggggtcttcctcct
cacctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattggaagt
ggagctagttctaaagctcagcagcttttacaaggtctccaagccactgatgaaagtcag
caactacaggcagtgattgagatgtgccagctgttggttatgggaaatgaagaaacgtta
ggaggatttccagtcaagagtgttgtaccagctttgataacattgctkcagatggagcac
aactttgacattatgaatcatgcatgtcgggccttaacatacatgatggaagcacttccc
agatcatctgctgtagtggtagatgcaattcctgtcttcttggaaaagctgcaagttatc
cagtgcattgatgtggcagagcaggcgcttacagccctggagatgttgtcacgcaggcac
agtaaagccattctgcaggcaggtgggctggcagactgtttgctgtatctggaattcttc
agtataaatgcacaaaggaacgcattagctatcgctgccaactgctgccagagtataaca
cctgatgagtttcactttgtggcagactctttgccattgctaacacaaaggttaacccat
caggacaaaaagtctgttgaaagcacttgtctctgttttgcacggctagtggacaacttc
cagcatgaggagaacttgctgcagcaggttgcttccaaggacttgttaacaaatatccag
cagctcttggtcgtgacacctcctatcctgagctcaggaatgttcatcatggtggtgcgc
atgttctccttgatgtgctccaactgccccacacttgcagtccagcttatgaagcaaaat
attgcagaaacgcttcacttcctcctttgtggagcctcaaatgggagttgtcaagaacaa
attgaccttgttccaagaagtcctcaagaactttatgaacttacttctcttatctgtgaa
ctgatgccttgcctgccaaaagagggaatctttgctgttgatactatgctaaagaaagga
aatgcacaaaatacagatggtgcaatatggcaatggcgagatgacaggggtctctggcat
ccctataacaggattgatagtcgaataatagaggcagctcatcaggttggtgaggatgag
atcagcctgtctacgcttgggcgtgtctatacgattgattttaactctatgcagcaaata
aatgaggatactggaacagcccgtgccattcagcgaaaaccaaaccctttagccaataca
aacactagtggacattcggaattgaagaaggatgatgctcgagcacaattaatgaaagag
gacccagaactggcaaaatcctttatcaaaacactgtttggtgttctttatgaagtatat
agttcttcagctggacctgctgttagacacaagtgccttagagcaattcttaggataatt
tattttgctgatgctgaacttctgaaggatgtgctgaaaaaccatgctgtttcaagtcat
attgcctccatgctgtcgagtcaagaccttaagatagtagttggagccctgcagatggca
gagattttaatgcaaaagttacctgacatttttagtgtttacttcagaagagaaggggtg
atgcaccaagtgaaaaacttggcagagtctgaagctttgctaacaagcccaccaaaagta
tgcactaatggatcaggaactctgggtaccactacgacgataagcactgggacagccact
gctgccagcaatgcagctgcagatttgggctctcccagcttacagcacagccgggaggat
tccttggatctgagcccacagggacgactgagtgatgttctaaagagaaaaagactgcca
aaacgagggccaaggagaccaaaatactcccctccaagagatgatgacaaagtagacaat
caagctaaaagccctacaactactcagtctcctaaatcttctttcttggcaagtttaaat
cctaaaacatggggaagattaagcacacagtccaacagtaataatattgaaccagcacga
acagcgggagtgagtggtcttgcaagggctgcttccaaggataccatttctaataacaga
gaaaaaattaagggctggattaaggagcaagcccataaatttgtagaacattactttagt
tctgaaaacatggatggaagcaatcctgcactaaatgtattacagagactttgcactgca
actgaacaactcaacctccaggtggatggtggaacagagtgccttgtagaaatccgtagc
attgtctcggaatctgacgtctcctcatttgaaatccagcatagtgggtttgttaaacaa
ctgctgctttatttgacatctaaaagcgaaaaagatgctgttagcagggatatcagattg
aaaagatttcttcatgtatttttttcttctccacttcctggagaagagccccttggaaga
ttagagccattagaaaatgcacctttgttggcattagtccataaaatgaacaactgcctc
agtcagatggaacagtttcctgttaaagtrcatgacttccctagtggaaatgggacagga
agcagtttttctcttaacagaggatcccaagctttaaaattcttcaatacacatcaatta
aaatgccaactgcaaagacatccagactgtgctaatgtgaaacagtggaaaggtggacct
gtgaagattgatcctctggctttggtgcaagccattgaaagataccttgtagttagaggc
tatggaagagttagagaagatgatgaagatagtgatgatgatgggtcagatgaagaaata
gatgaatctttggctgctcaattcttgaattcagggaatgtgagacatagactgcagttt
tacattggagatcacttgctgccatacaatatgactgtgtatcaagcagtcaggcagtac
agtttgcaagctgaggaagagagggagtctacagatgatgaaagtaacccattgggaaga
gctgggatttggacaaaaacgcacaccatttggtacaagcctgtgcgagaggatgaagat
ggtaataaggactgtgttggtggtaaaagaggaagagcacagactgctcccacgaaaacc
tcccctagaaattctaaaaaacatgatgaattgtggcatgatggtgtgtgcccgtcggta
ttaaatcctctggaaatttacctcatatctactccacctgaaaatataacatttgaagac
ccctcattagatgttattcttcttctgagagttttacatgccatcagtcgatactggtat
tacttgtatgataatgcagtctgcaaggagataattccaacctcggagtttatcaacagt
aaactgacagcaaaagcaaacaggcagcttcaggatcctttggtaattatgacaggaaac
atcccgacttggctgacagaacttggaaaaacatgcccatttttctttccgtttgataca
cgccaaatgctgttttatgtaactgcctttgatcgcgatcgagccatgcaaaggctgctg
gatacaaatccagagatcaatcagtcggattctcaggacagcagagtggcaccgcgactg
gacaggaaaaaacgcactgtgaacagagatgagctgttgaagcaggcagaatctgtgatg
caagatctaggcagttcaagagccatgttggaaatccagtatgagaatgaagttggcaca
ggcctaggccctacactagagttctatgcacttgtatctcaggaactacagagagcagac
ttaggcctttggaggggagaagaagtgactttagccaatccgaaaggaagccaggaaggt
accaagtacattcataaccttcaaggcctttttgcacttccttttggtagaacagccaag
ccagctcacattgcaaaagttaaaatgaagttccgctttctgggaaaactaatggccaag
gcaatcatggacttcagactggtggaccttcctcttggacttcctttttataagtggatg
ctacgacaggaaacttcgttgacatcgcatgacttgttcagtattgatccagtagtagcc
aaatcaatatatcatcttgaagatattgtaagacaaaagaaaagacttgaacaagataaa
actcagaccaaagaaagtctacagtatgcattggaggctctgactatgaatggctgctca
gtggaagatctggggctggacttcacacttcctgggtttcccaatatagagctgaaaaaa
gggggaaaggatacaccggtcactatccacaatttagaggagtatctcagattggttata
ttctgggcactaaatgaaggtgtcgccagacaatttgactccttcagagatgggtttgag
tcggtcttcccccttagtcatcttcagtacttctatcctgaggagttggagcagctcttg
tgtggcagcaagacagacacttgggatgcaaagactttaatggaatgttgcaggcctgat
cacggttatacacatgacagtcgagcagtgaagtatctctttgaaattctcagtagtttt
gatagtgarcagcaaagactgtttcttcagtttgtgacaggcagccccagactgcctgta
ggaggttttcgaagtttgaatcctcccttgacgattgtacggaagacatttgagtccaca
gagaatcctgatgatttcttaccctcagtaatgacttgcgtgaactatctcaaattgccg
gactattcaactattgagataatgcgtgaaaaactcttgatagctgcaagagaagggcag
cagtcattccatctttcctga
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integrated database retrieval system
