Malurus melanocephalus (red-backed fairy wren): 130574062
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Entry
130574062 CDS
T09178
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130574062 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmea03041
]
130574062 (PRPF38A)
Spliceosome [BR:
mmea03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
130574062 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
130574062 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
130574062
NCBI-ProteinID:
XP_057223017
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHEERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERIPSPDHRRRGYRDLDKPRRSPVVRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgcacggtgaaggacgcgcacagcatccacggcaccaacccgcagtacctg
gtggagaagatcatccgcackcgcatctacgagtccaagtactggaaggaggagtgtttc
ggcctcacggccgagctggtggtggacaaggccatggagctgaagtacgtggggggcgtc
tatggagggaacattaaacccacgcccttcttgtgcctgacgctgaagatgctgcagatc
cagccggagaaggacatcatcgtggagttcataaaaaacgaagacttcaagtatgtccga
atgcttggagcgctgtacatgagactgacaggcactgccatcgactgctacaagtacctg
gaaccactgtacaatgactataggaaaattaaaagtcagaacagaaatggggaattcgag
ctgatgcacgtggatgaatttattgatgaactactccatgaggaacgtgtttgcgatatc
atcctgcctcgactgcagaaacggtatgttctggaagaagctgagcaactygagcctcgt
gttagtgctctggaagaagacatggatgatgtggaatctagtgaggaggaggaggaagaa
gatgaaaagctggaacgaatcccatctcctgaccaccgcagaagggggtacagagacctg
gacaaaccccgcagatctccggtggtgcggtacaggcggagccggagcaggtctccaagg
aggcgcagccgctctccaaagagaagaagcccgtcaccacgccgggagaggcatcgcagc
aaaagcccgagacggcaccgcagcagatcccgggagaggcgccacagatcaagatctaaa
tctccagggcatcaccgtagtcacagacacagaagycattccaaatcacctgaaagatct
aagaaaagtcacaaaaagagtcggcgagggaatgagtaa
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