Malurus melanocephalus (red-backed fairy wren): 130574208
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Entry
130574208 CDS
T09178
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
130574208 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mmea01001
]
130574208 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mmea04054
]
130574208 (CIITA)
Enzymes [BR:
mmea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
130574208 (CIITA)
Protein kinases [BR:
mmea01001
]
Serine/threonine kinases: Other
TAF1 family
130574208 (CIITA)
Pattern recognition receptors [BR:
mmea04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
130574208 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_9
LRR_8
LRR_14
NB-ARC
nSTAND_NTPase5
RsgA_GTPase
NPHP3_N
nSTAND3
AAA_19
Motif
Other DBs
NCBI-GeneID:
130574208
NCBI-ProteinID:
XP_057223257
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
MDSXFVPENSYLDLLHSDIDPLQLCAFLDPKPSXDEEGDFSTDLEVDASNYEHLNNVDFP
CENGDVLYPCSNTTDAYATIAELVEYVLKDQQEKQVEDIFAGNLILDEITXENTEKFPDM
RMQTCLKRTFLGSAESYSDASEPKYKKIVEVPPVSAGNGSFFAMPLNSHPVSYTSLTNQH
MSFSVPAAHGLERSFIIPGLSEPLTAQCLPLNVRGYQENPGFAAPPQQIFNFVLENGTSD
VIIYPVLTSSIETFAPPSFPDSLCAQHMYTTNLGIPNAAEKLADLEIFQEVQDSTIPPEE
PFKKPEQVESFCSSLKDYFRDTCKSVTAEREVNLDHLFIDGTLVQSQTETKTGKNSAKAV
EKELVTCSLQEKEKTAIDRSQIFQIPQRKDLETKVIVVLGKAGMGKSILVQKICQDWSNG
EFSQFEFVFWFDWKQISLPEKRYSLKELLLEFFVKPQEGSKEIFEYILQNPAKVLLVFDG
FKGLHDHENFPHCSASQPEKDLCSIKELLSGLIQKKILNGCTLLFTARPKDKLFQYVSKV
DKAFEIVGFSPQQRELYITKYFEGSPYCESALELIKECEYLFSHCYSPIMCRFVCFLCET
VLEMGEKSLPSTLTEVFLKFFQQKIMLMQTDVTTTQNQESLATLARIAWCLGEKHQSAMK
SDLLPSKEVKEFALRYGFFLPFASPRHSDSEEEEFGSTFSDFVIQNFLCALHLLLAEELK
DKNLTKYLSFLSKKKKPYNWLDLMPRFLAGLMFLQHDSYFCSLSNEDAKQSIKKQKTLLK
NIRRLQINNLCPERLLELLRCIYETQNNYLLQHVALRLEPDLSFLGIVLSPPDVHVLHSI
LKRSRKEFSLDLRNSSIDLQGLKALVSLRNVTSFRASLSDAVRLWKSLEQTKDYELLKAS
TEKFVLDPFKAKTMKDICDLCDLVELQEKMMNCVQGASGFTSYEIPXIRNLRKLEFALGP
ACGLQGLLKLVKILAAFPSLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQNK
ITDLGAENLATALPSLSSLKTLSLYNNNICDFGAESLAKVLPAMTSLRVLDVQYNKITGV
GAQQLTDSLRKCPHIKNLVMWNPTIPYGVLEHLQQLDSRISV
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggattcaatrtttgtgcctgaaaacagctaccttgatttgctgcacagcgatatcgat
ccattgcaactgtgtgctttccttgatcctaagccatctgragatgaagaaggtgacttc
tctacagatcttgaagttgatgccagcaactatgaacacttaaataatgtggatttccca
tgtgaaaatggagatgtgttgtacccctgttctaacaccacagatgcttaygctacaata
gctgaattagtagaatatgtgctcaaggatcagcaggagaagcaggttgaagacattttt
gcagggaaccttattttggatgaaattactrctgaaaacactgagaaatttcctgacatg
aggatgcagacatgtcttaaacgaaccttcttaggctctgcagagagttactcggatgct
tcagaacccaaatataagaaaattgtggaagtccctccagtgtctgcagggaatggcagt
ttctttgctatgcctctcaacagccatccagtgagctacacctccctaaccaaccagcay
atgtccttttctgttcctgctgctcatgggctggaaagaagcttcataattcctggattg
tcagaacctttgactgcacagtgcctaccactcaatgtgagagggtaccaagagaaccca
ggctttgcagctccycctcagcagatatttaactttgttcttgaaaatggcacatctgat
gttataatatatccagtgctgacttcttccatagaaacatttgcacctccaagttttcca
gatagtttatgtgcacaacatatgtacaccacaaatcttggaattccaaatgcagcagaa
aaattagcagatttagaaatatttcaagaagttcaagattccacaattcctcctgaggaa
cctttcaaaaaaccagagcaagtggaatctttctgytcgtctctcaaggattatttccga
gacacgtgcaaatctgtgaccgcggagcgggaggtaaatctggatcacctgttcattgat
gggacacttgttcaaagtcaaactgaaaccaagactggaaagaatagtgcaaaagcagtg
gaaaaggagctggtaacttgcagcctgcaagagaaggaaaagacagccattgacagaagc
caaatatttcaaatcccacagcgtaaagacttagagactaaagtgattgtggtgctggga
aaagcaggaatgggcaaaagcattcttgttcagaagatctgccaggactggtctaatgga
gagttttctcagtttgaatttgtattttggtttgactggaaacaaataagcttgcctgag
aagcgatacagcctgaaggaactgctgcttgaatttttcgtaaaacctcaagagggaagc
aaagagatctttgagtatatattgcaaaatcctgctaaagtccttctggtttttgatggt
tttaaaggattgcacgatcacgagaacttccctcattgctcagcyagccagcctgaaaaa
gatttgtgcagtataaaggagctgctttcaggactcatccaaaaaaagatactcaatggt
tgtactttattatttacagcaagaccaaaagacaaactgttccagtacgtgtccaaagtg
gataaggcttttgaaatagtaggattttcccctcagcagagggaattgtacataaccaaa
tactttgaaggatcaccttactgtgagagtgcactggaattaatcaaagagtgtgagtac
ttgtttagtcattgttacagccccattatgtgtaggtttgtttgttttctmtgtgagaca
gtacttgaaatgggggagaaaagtcttccttcaactcttactgaagtcttcctgaaattt
tttcagcagaagataatgcttatgcaaacagatgttacaaccacacaaaatcaggagagt
cttgctaccctagcccgtatagcctggtgtctgggagaaaagcaccaaagtgccatgaaa
agtgatcttcttccttctaaggaagttaaagagtttgccctgagatayggatttttcctg
ccttttgcgtcccccagacattcagatagtgaagaagaggaatttgggagcacattctct
gactttgtcattcagaatttcttgtgtgcacttcaccttttgttagctgaagagctcaag
gataaaaatctaaccaagtacttgtcrtttctatccaagaagaaaaaaccttataattgg
ttagatttaatgcctcgatttctggctggtttgatgtttctccagcatgactcttacttc
tgctctctttcaaatgaggaygcaaaacaatcaatcaagaagcagaaaacactcttaaaa
aacattagaaggctgcagattaataatctctgtccagagaggttgctggagcttttacgt
tgtatttatgaaacacagaacaattatcttctgcagcatgtggccttaagactcgagcca
gacttgtcctttctgggcatagttctttcaccacctgatgtccatgtactkcactctatt
ctgaaaaggtcaagaaaagagttttccttggatttgcgaaacagcagcattgacctgcaa
gggctgaaagccttggtcagcctcaggaacgtgacatcgttcagggcctccctcagtgat
gcagtcaggctctggaaatctttagaacagacaaaagactacgagctgctgaaagcatcc
acagagaaatttgttcttgatccctttaaggcaaagacgatgaaggacatctgtgacctc
tgtgaccttgtagagctgcaggagaagatgatgaattgtgtgcaaggtgcatctggtttc
accagctatgaaattccggscatcagaaacctcagaaaactcgaattcgcrctgggtcca
gcatgtggccttcaaggactgctaaaactcgtgaaaattcttgcagcatttccatcactt
cagcatttagatcttgatgctctcagtgaaaatggcataggagatgaaggagcaaagagt
ctatctgaagtctttccaaccctaacatcactggaaacattaaatttatcacagaataaa
ataacagacctgggtgcagagaaccttgctacagctcttccttctttgtcttccctaaaa
acactaagcttgtacaataacaacatttgtgacttcggagcagaaagtctggcaaaagtt
cttcctgcaatgacttctttaagagtgctagatgttcagtataacaaaataactggtgtt
ggagcccagcagctgactgacagcctacgaaaatgtccccatataaagaacttggtgatg
tggaatcccaccattccctatggagttcttgarcaccttcagcagctggactctaggatc
agtgtgtag
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integrated database retrieval system
