Malurus melanocephalus (red-backed fairy wren): 130574583
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Entry
130574583 CDS
T09178
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130574583 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmea03021
]
130574583 (SMARCC1)
03036 Chromosome and associated proteins [BR:
mmea03036
]
130574583 (SMARCC1)
Transcription machinery [BR:
mmea03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130574583 (SMARCC1)
Chromosome and associated proteins [BR:
mmea03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130574583 (SMARCC1)
PBAF complex
130574583 (SMARCC1)
GBAF(ncBAF) complex
130574583 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
SWIRM-assoc_2
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
BRCT_2
DUF919
Chromo
SpeFL
Motif
Other DBs
NCBI-GeneID:
130574583
NCBI-ProteinID:
XP_057223875
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPT
IYLIPDMELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSMDDDEWLRPVMRKDKQV
LVHWGFFPDSYDTWVHANEIDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDE
NRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQAA
LYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDE
QDEETVATGGKEDEDPNKGDQSRSTDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRA
LPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLE
QWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHIRTPQVPAAQQMLSFPEKNK
EKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRV
ASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEP
EKMDGAEEEKMETEAEGQQTEKVESKAESEIEEGEKVPEGENERTTEKEPESEGAAEPKT
EEKEAEENKENVDGSKDKEAEAGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEER
KIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYA
ELRARQQMEQQHSQNPQQPHQHPSGPGMNPLGAPAHPGLLPHQQPPPYPMMHHQMPPPHP
PQPGQMPGPGSMIPGQPLAGRMMPSVTASMHPTGGAAPPGMSPMSGNLIGPRVPLAAPNG
LYPGPAQPPPPAEGVTPPPAGAPPASAAP
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaagctggaggtacattatgtcacattcttggtgctgcttacaaatataag
aatgaacagggctggaggaggtttgacctgcagaatccctcccgaatggatcgcaacgtg
gagatgttcatgaacattgagaaaacactggtgcagaacaactgtctgagcagaccaacc
atctacctcattcctgacatggagctgaagctggccaacaagctgaaggacattgtcaaa
cgtcaccagggaacagtcactgaagagaaatccaaggctacccaccacgtgtatccaagt
cctacctcaatggatgatgatgaatggttgagacctgtgatgagaaaggacaagcaggtg
ctggtacattggggcttttttccagacagctatgacacctgggtccacgccaatgaaata
gatgcagaaatcgaggatcccccgattcccgagaagccgtggaaggttcatgccaagtgg
attttggacacagatgtgttcaacgaatggatgaatgaagaggattatgaggtggatgag
aacaggaaatctgtgagttttcgccagagaatctccatgaagaatgaagagcccgtgcgg
agcccagagaggagggacaggaaagcagcagccagtacaaggaagaggaaacattctcct
tctccaccccccactcctgtggagtccaggaaaaagacagggaagaaaggacaagcagct
ctgtatggaaaaaggagggggcagaaggaagaagatgaacaggaagatctcaccaaggac
atggaggatcccacaccagtacccaacatagaagaagtggtacttcccaaaaatgtgaac
ccaaagaaggacagtgagaacacgcccgtgaaaggaggaaccgtggcagacctggatgag
caggatgaggagacagtggcgactggaggaaaggaggaygaggatcccaacaagggtgac
cagagccgctccactgacccaggggaggacaacgtcactgagcagaccaaccacatcatc
atccccagctacgcctcctggtttgactacaactgcatccatgtgattgaacgtcgtgcg
cttccggaattcttcaatggaaaaaacaagtccaagactccagaaatatacctggcctac
aggaacttcatgattgacacgtatcggctgaacccgcaggagtacctgaccagcactgcc
tgcaggaggaacctcaccggggacgtctgcgccgtcatgagggtgcacgctttcctggag
cagtgggggctcattaactaccaagtggatcccgagagccgccccatggccatggggcca
ccccctaccccccacttcaacgtgctggccgacaccccctcggggctgatgcccctgcac
atccgcaccccgcaggttccagctgcccagcagatgctgagctttcctgagaaaaacaag
gagaagccaactgacctgcagaacttcggccttcgcacagacatctactccaaaaagact
ttggccaagagtaaaggtgcaagtgcagggagagaatggacagagcaggagacactgctg
ctgttrgaggcgctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggc
agccgcactcaggacgagtgcatcctgcacttcctgcgcctgcccatcgaggatccmtac
ctggagaactcggacgcgtcgctcggccccttggcctaccagcccgtgcccttcagccag
tcgggcaaccccgtcatgagcaccgtggccttcctggcctcygtggtggatccacgcgtg
gcctcrgccgccgccaaggccgccctcgaggagttttcccgagtcagagaggaggtgccc
ctggagctggtggaagcccatgtgaagaaggtgcaggaagcagctcgagcctctgggaag
gtggatccgacctacggcctggagagcagctgcattgctggcaccggccccgacgagccc
gagaagatggatggagctgaggaagagaagatggaaacagaggcagagggccagcagaca
gagaaggtggagagcaaagctgagagtgaaattgaggaaggagagaaagtcccggaaggg
gaaaacgagcggaccacagagaaggagccagagagcgaaggggctgcggagcccaagaca
gaggaaaaggaggcggaggagaacaaggagaacgttgatggcagcaaagacaaagaggcc
gaggctggcaagaagaaagtggagcacgagatctcggaaggaaacgtggccacagctgca
gctgctgccttggcctctgctgccaccaaagccaagcacctggcagctgtggaggagagg
aagatcaagtctctggtggcccttttggtggaaactcagatgaagaagctggagataaaa
cttcgccactttgaggagttggaaacgatcatggaccgggagaaagaggcactggagcag
cagaggcaacagctgctgactgagaggcagaacttccacatggagcagctcaaatacgcc
gagttaagggctcgccagcaaatggagcagcagcacagccagaacccccagcagccccac
cagcaccccagcgggcctggcatgaaccccctgggggcaccagcacacccagggctgctg
ccccaccagcagcccccgccctaccccatgatgcaccaccagatgccacctcctcacccg
cctcagccaggtcagatgccgggccccggctccatgatcccggggcagcccctggcaggc
cggatgatgccgagtgtgacagccagcatgcaycccaccggcggggccgccccgcccggg
atgtccccgatgtcggggaacctcatcggaccgcgcgtcccgctggcagctcccaacggc
ctgtatcctggtccggcgcagccgccgccccccgcggaaggagtgacgccgcctccggcc
ggagccccaccagcctcagccgctccctaa
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integrated database retrieval system
