Malurus melanocephalus (red-backed fairy wren): 130575156
Help
Entry
130575156 CDS
T09178
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130575156 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmea03041
]
130575156 (DDX5)
03009 Ribosome biogenesis [BR:
mmea03009
]
130575156 (DDX5)
Enzymes [BR:
mmea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130575156 (DDX5)
Spliceosome [BR:
mmea03041
]
Complex A
U1 snRNP components
U1 related factors
130575156 (DDX5)
Complex B
130575156 (DDX5)
Ribosome biogenesis [BR:
mmea03009
]
Eukaryotic type
Pre-60S particles
Helicases
130575156 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
130575156
NCBI-ProteinID:
XP_057224849
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MPGYSSDRDRGFGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VVRRTAQEVEQYRASKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSR
GDRRDRYSAGKRGGFSSFRERENFERTYGALGKRDFGAKTQNGAYSAQSFSNGTPFGNGF
AAAGMQAGFRAGGNPAGAYQNGYEQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPT
SYSQ
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggtattccagcgacagggatagagggtttggagcccctcgtttcggaggaagt
agaggtggacctctctctggaaagaaatttggaaaccctggggaaaaacttacaaaaaag
aaatggaatttagatgagctgcccaaatttgagaagaacttctaccaagaacatccggat
gtagttagacgtactgcgcaagaagttgaacagtacagagcgagcaaagaggtcacagtt
aggggccataactgtccaaaaccaattatcaacttttacgaagcaaacttccctgcaaat
gttatggaggtaattcagaggcagaacttcactgaaccaactgctattcaagcacaaggt
tggcctgttgcrttgagtggactggatatggtcggagtggcacagactggatcagggaag
acactctcttacttactgcctgccattgtgcatataaatcatcagccattcctggagcga
ggagatggacctatttgtcttgtgctggcaccaacccgtgaactggcccaacaagtgcag
caggtagctgctgaatacagcagagcatgtcgtttgaagtccacgtgtatttatggaggt
gctccaaagggaccacagatccgtgacctggaaagaggtgtggaaatctgcattgcaaca
cctgggagacttatagatttcttagaagctggaaagaccaatctcaggaggtgtacttac
cttgtccttgatgaagccgacaggatgcttgacatgggatttgaacctcagatcagaaaa
attgtggatcagataagacctgacaggcagactctgatgtggagtgctacatggcctaag
gaagtgaggcagctggctgaagatttcttgaaagaatatgtgcacatcaacatcggtgca
ctggaactgagtgcaaaccacaacatccttcagattgtggatgtgtgtcatgatgtagag
aaagatgacaarcttattcgtttgatggaagaaataatgagcgagaaggaaaacaaaaca
atygtttttgtggaaaccaaaaggcgttgtgatgaccttaccagaaaaatgaggagagat
gggtggccagcgatgggtattcacggtgataaaagtcagcaggagcgggactgggttcta
aatgaattcaaacacggaaaagcaccaatcctgattgctacagatgttgcatccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactacccaaactcctcagaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacacattc
tttactcctaacaatattaagcaagtaaatgacctcatctctgtgcttcgggaggctaat
caagccatcaaccccaaattgcttcagctgattgaagacagaggttcaggtcgttcccga
ggtgaccgacgtgacagatactctgcgggcaaaaggggtggatttagtagttttagagag
agggagaactttgagagaacctatggtgccctaggcaagagagactttggagcaaaaacc
caaaacggggcttacagcgcccagagtttcagcaatggaactccctttgggaatggcttt
gccgctgcaggcatgcaggctggcttcagggccggcggtaaccccgcaggagcgtaccag
aacggctacgagcagcagtacggcagtaacattgccaacatgcacaatggcatgaaccag
cagcagtacgcctaccctgccactggtgctgctcctatgataggttaccccatgcccaca
agttattctcaataa
DBGET
integrated database retrieval system
