Malurus melanocephalus (red-backed fairy wren): 130575169
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Entry
130575169 CDS
T09178
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmea03019
]
130575169 (HELZ)
Messenger RNA biogenesis [BR:
mmea03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
130575169 (HELZ)
3'-5' decay
Other 3'-5' decay factors
130575169 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
AAA_30
ResIII
UvrD-helicase
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
AAA_22
zf-CCCH_4
AAA_16
AAA_7
Bac_DnaA
AAA_5
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
130575169
NCBI-ProteinID:
XP_057224875
LinkDB
All DBs
Position
Unknown
AA seq
1943 aa
AA seq
DB search
MADRRPEKACEQACESLKQQDYEVAVKHCTEALLSLSQYPPAHLPEPCQAELDRIKIETL
LYRIASFLQLKKYGQADEDCRHVLGEGLAKGDGSLRAVLCCMHLKGKLQIVSNVLSKSLM
GESLNGMVTKDLTRLKTLLAETEAAGNVPSGYHVEDLEEGSRDGWHFRPPPRGVTSSEEY
TLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKENKQCSGSYMETLIE
KWMNSLSPEKVLSECVEGVRVEHNPELSVTVTTKKSHQTWTFALTCKPARMLYRVALLYD
AHRPHFSIVAISAGDSTTQVSQEVPENCQEWIGGKMVQNGIDHYIYKVSIAFNTEIFGTF
RQTVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIVEFEPNET
TELEKSLLTRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNIK
VQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVTK
EKSAQTQGTKEKVYEAAIEEKTKDYIFLRVSRECCEELNLRADCEMQVELQFQLNRLPLC
EMHYALDRIKDNSILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQL
PPVLIIGPYGTGKTFTLAQAVKHILQQQDTSRILICTHSNSAADLYIKDYLHPYVEAGNP
QARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLCQ
LDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNL
HVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPL
TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV
FRIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDST
EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENESLHGI
TFEQIKAQLEALELKKTYVLNPLAPEFIPRALRHQHSANPTKQQQSPPKGKVHHHNQNDH
FPPDGIVQPNPSVLIGNPIRAYTPPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNMVMSVPLPVPWTGYQGRFAVDPRLITHQAAMAYNMNLLQAHGRGSPIPYGLGHHSPV
SIGQQQLPHQDKEQHEQTRNGKSENTAGPEINKIRTPEKKPMESKQVDLEANPQQRSPES
RCSAGYPNAKFHRKDNPNPRQLNLHLTPPHSQFAVPTRHFQHLAQLPRQPYPLQQQQQQQ
QNLLNQQQNHLPEQPNQMAAQQSQVVQQHNHLNQQPPPPSQLSPAYPAGPSQSFFNNPIP
HRPHSPAVDAVISEQHPPPLLQEVNNPLRPIAQHNPVLPTHLNNFIEENPSGMPLGDTLD
RMHGNVALETIRQQQQARLQQWNEHNAYLSQGTIPYQHHHHPHLPHLPQQPIGLHQQQQV
RANWKLASNTEDETEATYSRFQDLLRELSHRDPSESRDVGEMPPPQSRLLQYRQVQPRSP
PALPSPSCNSNHFPNFTDNSRDIELPTNPAFQQHLPQMYNPPFSMPSEHITPSPLKYLQP
DGSWTYANLQQNHLLGQGFHYGIPPLPHRSQQSPFIQIQNHQHAVGQEPFHPLASRAVSA
SSLHSLEEYEPRGPGRPLYQRRISSSSVQACSEELSTPQDSLGQCKELQDHSNQSSFNYS
SPELWVNSSSSSAPYPNIPCNGASRAVPPRELLAPPKAAKPPEEHLKAENIQLSNSFNYN
VLQHLGQFPPLMPNKQLVESNSSSPQPSGGTKPVMSYASALRAPPKPKPPPEQTKKNSDP
LSLFQELSLGSSSGSNGFYSYFK
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaaggcatgtgaacaagcatgtgaatcccttaagcagcag
gattatgaagtggcagtgaagcattgcacagaggctctcctttccctcagccagtacccc
ccagctcacctcccggagccctgccaggcagaactcgaccgcatcaaaatcgagactctt
ctgtatagaattgcttcctttttacaacttaaaaagtatgggcaagcagatgaagactgt
aggcatgtgctgggagaggggctggccaagggcgatggatctctccgggcagtgctctgc
tgcatgcatctcaaagggaagctgcaaattgtgtctaatgttctttccaaatcactgatg
ggggaatcactgaacgggatggtcactaaagatctgacacgactgaaaacacttcttgct
gaaacagaggcagctggtaatgtaccatcaggatatcatgtagaagatttagaagaaggg
tctcgggatggttggcacttccgcccccctcccaggggcgtcacgagcagtgaggaatac
acactctgtaaaagatttttggagcaagggatctgcaggtatggtgcccagtgtacttca
gcacattcccaggaagagctgacagaatggcagaaacgctacgcttcccgcctgatcaga
ttgaaacagcagaaggaaaacaagcagtgctcaggcagttatatggaaaccctkattgag
aaatggatgaattcgttatctcctgagaaagtgcttagtgaatgtgtagaaggagtgaga
gtagaacataatcctgagctctcggtaactgtcaccaccaaaaagtctcaccagacatgg
acatttgctctcacgtgtaagcctgcaagaatgctgtatcgagtggcattgctttacgat
gcccatcgaccacacttcagtattgttgcaatatctgctggagacagcaccacccaggta
tcacaagaagttccagaaaactgccaggaatggataggaggaaagatggtccagaatgga
atagatcactatatatacaaagtcagtatagcctttaacacagaaatctttggaactttt
cgccaaactgtggtgtttgactttggattagaaccagtcctcatgcaacgagtgatgatt
gatgctgcttccactgaagaccttgaatatttgatgcacgcacggcaacagctcctgacc
acagccaagcgctgggattccacgtctaagactattgtagagtttgagcctaatgaaact
actgaattggagaagagccttctcaccagataccaaatccctctgtctgctgaccagcta
ttcacacaatctgtcctggacaaatcattgaccaagaccaactatcagtcacggctccac
gacctcctttatattgaggaaatagcccagtataaggaagttagcaagttcaacataaaa
gtgcaattgcagattgtagcaagcttcatgctcactggtgtttctggaggtgcaaaatac
gcccaaaatggacaactttttggccgctttaagctcactgagacgctttctgaagacact
ttggctggacggctggtgatgaccaaagtcaatgctgtttatttattgcctgtcactaaa
gaaaagtcagcccagacccaaggaaccaaagagaaggtttatgaagcagctattgaggag
aagacaaaggattatatcttcttgagggtatccagggaatgctgcgaggagctgaatctc
cgggcagattgtgaaatgcaggtcgaactccagttccagttgaaccgcttacccctctgt
gaaatgcattatgctttggacaggattaaggacaacagcattttgtttccagatgtcagc
atgactcccaccatcccctggagtcccaacagacaatgggatgagcagttggaccctcga
ctcaacgcgaagcagaaagaggctgttctggctatcaccaccccgctgtccatacaactg
cctcctgttcttatcatcggtccctatgggacaggaaaaaccttcactctggctcaggca
gtcaagcacatcctccagcagcaggacaccagcaggattctcatttgcacccattctaat
agtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaatccc
caggcaagacctctcagggtatatttccgaaatcgctgggtaaaaactgttcacccagtc
gtgcatcagtactgtttgatttcaagcacacattccaccttccagatgccacagaaagaa
gacattcttaagcagcgagtagtrgttgttactttaaatacatcacaatatctatgtcag
ctggatctmgaaccaggkttttttacacacattctgttagatgaagctgctcaagctatg
gagtgtgaaactattatgcctctggcattagctaataaaaacacaagaattgtcttggct
ggagaccacatgcagctcagtccttttgtctacagtgaatttgccagggagagaaacctt
cacgtttccttgctcgaccggctctatgagcactaccctgcagaattcccctgcaggatc
ctgctgtgtgagaactatcgctcccatgaagcaatcatcaattacacatccgaacttttc
tatgaaggcaaattgatggcgagtggaaagcagccagcacacaaagatttctaccctttg
actttcttcacagcacgtggagaagatgtgcaagaaaaaaacagtacagctttttacaat
aatgcagaggtttttgaggtggtggagcgtgtggaagagctgaggaggaagtggccagtg
gcctggggcaagctggacgatggcagcatcggggtggtgaccccgtacgccgatcaggtg
ttccggatccgcgccgagctgcgcaagaaacgcctgtcggacgtcagcgtggagagagtg
ctcaacgtgcagggaaaacaattccgagttttgttcctcagcacagtacgaacacggcac
acgtgcaaacacaagcaaactccaattaaaaggaaagagcagttgctggaggattccaca
gaagatttggattayggttttctgtctaattacaaacttctcaacactgccattacgaga
gcacaatccttggtagctgtggtgggagatcctattgctttgtgttccattggaagatgc
aggaaattctgggaaaggttyattgccctgtgccacgagaatgaaagtcttcatggcatc
acgtttgagcagatcaaagctcagctggaagctctggagttgaagaaaacctacgtgttg
aaccctctggctcccgagttcatcccccgagccctgcggcatcagcactcggccaacccc
accaaacagcagcagtcacctccaaagggcaaggtccatcaccataaccagaatgaccat
ttcccacctgatggaattgttcagcccaatccttctgttctaattggaaatcctatccga
gcatatactcctccccctcctcctctgggacctcaccccaatctggggaaatctccaagt
cctgttcaaaggatagatccacacactgggacaagtattctctatgtacctgctgtctat
ggaggaaatatggtcatgtctgtgcctttgcctgtaccatggacggggtatcagggtagg
tttgcagtcgaccctcgactcattactcaccaagcagctatggcatataacatgaacctg
ttacaggcacatgggcgagggtctccgatcccgtatggcctgggscaccactctcctgtt
agcataggacagcagcagctcccacaccaggacaaggagcagcacgaacaaacccgcaat
ggtaaaagtgaaaacactgctggacctgaaatcaataaaattcgaacacctgagaagaaa
cctatggaatccaagcaggtcgatttagaagcaaatcctcagcagagaagccccgagtcc
cgttgcagtgccggttaccccaatgcaaaattccaccgcaaagacaaccccaaccccagg
cagctgaacctgcacctgacccctccccactcccagtttgcagttcccacccgccacttc
cagcacctggcccagctcccgaggcagccctaccctctgcagcaacagcagcaacagcag
caaaaccttttaaaccaacagcaaaatcacttgcctgagcagcccaaccaaatggcagcc
cagcagagccaggtagttcagcagcataatcacttgaaccagcagcctccgccaccttcg
cagctttcccctgcttacccagcaggycccagccagtccttttttaataatcccattccc
caccgaccgcattctcctgctgtagatgctgtgatttcagaacaacaccccccacctctg
ttacaagaagtcaataatcctttgaggcctattgcacagcacaacccagttctgccaacc
cacttgaacaacttcattgaagagaatccatcaggaatgcccttaggggacactttagat
cgtatgcatggaaatgtagctttggaaacaataaggcagcaacaacaagccaggttacag
caatggaatgaacataatgcctatctcagtcaaggcactattccatatcaacaccatcac
catcctcatctaccacatcttcctcagcaaccaattggattacatcaacagcagcaagtt
agggcaaactggaaacttgccagtaatacagaagatgaaacagaggcaacatattcaaga
ttccaggacttgctccgagagctgtcacaccgcgatccgagcgagagccgggacgtaggc
gaaatgccacccccccagtccagactgttgcaatacagacaagtgcagccccggagccca
ccagcactcccttctccttcctgcaactccaaccacttccccaacttcactgacaacagc
agagacattgaactgcccactaacccagcatttcagcagcatttaccccaaatgtacaac
ccccctttctccatgccatccgaacacataaccccgtcacccttgaaatacctgcaacct
gatggatcctggacttacgctaacctccagcagaatcacctcctggggcagggctttcac
tatggaatacctccactgccccacaggtcgcagcagagcccttttatacaaatccagaac
catcagcacgcagtcggtcaggagccatttcatccactcgcatctcgagcagtttctgct
tcttcgctccacagcttagaagagtatgaaccaagaggaccaggcaggccgttgtaccaa
agaagaatttcctctagttcagtccaggcttgttctgaagaattaagcactcctcaagac
agtcttggtcagtgtaaagagcttcaggaccacagtaaccagtcatcattcaactactcc
tcccctgagctgtgggtgaactcctcrtcctcctctgccccctacccaaacattccatgc
aatggagccagcagagccgttccccctcgggagctcttagctcccccgaaggcggccaag
cccccggaggaacacctgaaagctgagaacatccagctctccaactccttcaactacaac
gtgctgcagcacctgggccagttcccccctctgatgcccaacaagcagctggtggartcc
aacagcagcagcccccaaccctcgggtggcaccaaacccgtcatgtcctacgccagcgct
ctgcgagctccccccaaacccaaacctcctcccgagcagacaaaaaagaacagcgacccc
ctgtccttgtttcaggaacttagcctaggtagttcatcaggtagcaatggcttttactcc
tattttaaataa
DBGET
integrated database retrieval system
