Malurus melanocephalus (red-backed fairy wren): 130575538
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Entry
130575538 CDS
T09178
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130575538 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmea04131
]
130575538 (TGFBRAP1)
Membrane trafficking [BR:
mmea04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130575538 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
130575538
NCBI-ProteinID:
XP_057225451
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MSVKAFKLVSAVEREMLMGDKNYINIECIECCGKNLYIGTNDCFIYHFLLDEKVSTAGKV
TFAATKQLHKYLGLKKPVSELKAASALTRLLVLCDNTITLVNMINLEPVPTGARIKGAVT
FTLNENPVSGDPFCVEVCIISVKRRTIQMFMVFEDRVQIVKEVFTPEQPCAVAVDGYYLC
LALTTQYIILNYNTGVSQDLFPYCSDEKRPIVKRIGRQEFLLAGPGGLGMFATVDGISQR
APVHWSENVIGAALCFPYVVALDEEFITVHSMLDQQQKQTLPFKEGHILQDFEGKVIVAT
NKGVYILVPLPLEKQIQDLLASHRVEEALVLAKGARRNIPKEKFQVMYKRILQQAGFIQF
AQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFIRSHPPLHEYADLNQLTQGDQEKM
TKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEANHESLLDLLVSENFCLLTDSAA
WLEKHKKYFALGLLYHYNGQDAAALQLWVKIVDGDIQDSTRSDLYEYIVDFLTFCSDQDL
VWKYSEWILQKNEEVGVQIFTKRPVEEQEKNSINPDDIISCLNKYPKARVRYLEHLVLER
KIEKEKYHTHLAVLYLEAILQLKSMTTDNCTEXTELLLKLRSLLQKSDLYRIRFILDKIQ
GTDLHMESAILYGKLEEHEKALHILVHELKDFHAAEEYCIWNSENKDVQYRRRLFHMLLS
VYLTPGTSDCALMMAAVDLLNNHAAEFDAGLVLQVVPDSWSVQLLSPFLAGAMRQSIHTK
RMXQVALGLAQAENLIYKYEKVKQKGAPIFLSDKKVCQVCQNPFCEPVFVRYPNGSMAHT
HCAANRHLNSNVTPHSPSSSNQT
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcaaagctttcaagctcgtttctgctgttgagcgggagatgttaatgggagac
aaaaattacatcaacatcgagtgcattgagtgttgtgggaagaacctctatattggaacc
aacgactgctttatctatcactttctgttggatgaaaaggtatcaactgctggaaaagta
acttttgctgccaccaagcaaytacacaaatacctgggcttgaagaagcctgtgagtgaa
ttgaaagcagcctctgccctcaccagactccttgtgctttgtgacaatacaataacacta
gtgaacatgatcaacttggaacctgtccccaccggtgctaggatcaaaggagctgtgacg
ttcacgctgaatgaaaaccctgtgagtggggatcctttctgcgttgaagtttgcattatc
tcggtcaagcgtcggacgattcaaatgttcatggtgtttgaagacagagtccaaatagtg
aaggaagtgtttactccagaacaaccctgtgctgtggctgtagatggttactacttatgc
cttgcccttactacacagtatataattttgaattataatactggcgtctcccaggaccta
tttccttattgcagtgatgagaaacggccaattgtgaaaaggataggcagacaagagttt
ttgttggctggccccggaggcctaggcatgtttgctactgtagatgggatttcacagcgm
gccccagtgcactggtcagagaatgtgattggggcagctttgtgctttccttacgtggtt
gctctcgatgaggagttcattacggtgcacagcatgctggaccagcagcaaaagcaaacc
ctgccttttaaagaaggtcayattctacaggattttgaaggaaaggtgattgttgctact
aacaagggtgtgtatatcttggtgccactacctttggaaaaacagattcaggatcttcta
gctagccacagagtggaagaagcccttgttctagcaaaaggagctcgaaggaatattcca
aaagagaaatttcaggtaatgtacaaacgaatcctgcagcaagcaggttttatacagttt
gcacagcttcagttccttgaagcaaaagaactcttcagaagcggccagcttgatgtccgg
gagctgatctctctctaccccttcctgttgcctacttcctcttcatttatccggtctcat
ccccctctgcacgagtacgcggacctgaaccagctgacccaaggggaccaggagaagatg
acaaaatgcaaacgattcctcatgagttatttgaatgaagtycgcagcactgaggttgca
aatggctacaaggaggatatcgacacagcgttactcaagctgtatgcagaggcaaatcat
gaaagcctgctggatctcctggtttctgagaacttctgtcttttaacggatagtgctgcy
tggctggaaaaacacaaaaagtattttgcacttggtctcctgtatcactacaatggtcag
gatgctgcagcacttcagttgtgggtgaagatagttgatggagacattcaagattctaca
cgttcagatctctatgagtacatagtagacttccttacattctgctcagaccaagaccta
gtgtggaagtactctgaatggattttacaaaaaaatgaagaggttggtgtacagattttc
actaaaaggcctgtggaagaacaggagaaaaacagcattaatccagatgatatcatcagt
tgccttaacaaatatcctaaagcacgtgtcagatatctagaacatctagtactggaaaga
aaaatagagaaagagaagtaccatactcatctagctgtcttgtacttggaggcaatactt
cagctgaaatccatgaccacagataattgtacagaarcaactgaactgctgctgaaactg
cgcagtctgcttcagaaatctgatctttatagaattcgctttattttggacaaaatccag
ggcacagaccttcatatggaaagtgcgattttatatgggaaactagaagaacatgagaag
gctttgcatatcctygtccatgagttaaaggacttccatgctgctgaagaatactgtata
tggaactctgagaacaaagatgtgcagtacagacggaggcttttccatatgctgctgtca
gtgtatttaactccaggcacttcrgactgtgcactcatgatggctgctgtggatctcttg
aataaccaygctgcggaatttgatgcaggtctggttttgcaggtggtgcctgacagctgg
tcagtgcagcttctctctcccttcctggctggagcaatgagacaaagcattcacacgaaa
agaatgrctcaggtggcacttgggttagcacaagctgaaaacttaatctacaagtacgag
aaggttaaacaaaaaggagccccgatttttctttccgacaaaaaggtgtgtcaggtgtgc
caaaatcctttctgcgagcctgtgtttgtaagatacccgaacgggagtatggcccacacg
cactgtgctgcaaacagrcacctcaattccaatgtgactcctcactctcccagctccagc
aatcagacttga
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