Malurus melanocephalus (red-backed fairy wren): 130575914
Help
Entry
130575914 CDS
T09178
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130575914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmea03019
]
130575914
Messenger RNA biogenesis [BR:
mmea03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
130575914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
130575914
NCBI-ProteinID:
XP_057226135
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MSSSCSISXDDTTGKQEDGPIPGHTESAHPLQDAPQESRPVNNEDREMSQHALPSGEDDE
DDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTGRGYGASASAKLQPKGIDLDAAG
NINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEETWKAYCEKQRRLQLGLDPAPPI
STENKITVQQGRTGNAEKEVENNIIKTEFKTDFLALVGGRMKAGPPPNRKLGGTIDVIGG
QAGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPPQQPQQPSQPQQPPQQQPFAPPAGP
PPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPIPGLFPPPLAPPPALLIPTLDGQ
PASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTVDKGASSSSSSHWEYSGSRRERE
RERERERERERDRDRDRTPTTSEYNNDDERYRYYSRERSYDFERDYRRSRDRSREREERH
RERRHRDKDDSSKHKSSRRKQHESEEGESHRRHKHKKNKRSKEEKEASEDGAAEGEEQDT
KE
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtccagttcctgctccatttcctawgatgacaccactggtaagcaagaagatggacca
attcctggacacacagaatctgctcaccctctgcaagatgctccccaggagagccgrccc
gtcaacaacgaggacagagagatgtcacagcacgcccttcccagtggtgaggatgatgag
gatgacagtgacagtgacagcgatgatgatgacgtgaaggttacgattggcaacatcaaa
acgggagcaccgtcctacatgggaactcctatgaatctaaacttaaaaacgggtagaggc
tatggagcatctgcttcagctaagttgcagcccaaaggtattgacttggatgccgcaggg
aatataaatggattgcctgtgatagaagtggatttggattcatttgaagacaaaccatgg
aggaaaccaggtgctgatctttctgattactttaattatggatttaatgaagaaacatgg
aaagcttattgtgaaaagcagcgacggcttcagctggggctggaccctgctcctcccatc
agcactgagaacaagatcacggttcagcagggaagaacaggaaatgctgaaaaagaagtg
gaaaacaacatcatcaaaacagagttcaaaacagacttcctggctctggtgggaggacga
atgaaggctgggcctcctcccaacaggaagctgggtgggaccattgatgtgatcgggggc
caggcgggcacgatccgcagggtggaaggaagacgtcgggataaacacgcctcagaggaa
aaccccattcaggtcctgggagatcatggaagcaagccacagcccccgcagcagccccag
cagccatcccagccccagcagcctcctcagcagcagccgttcgctccaccagcagggcct
ccacctcccccgcttgctgggcctcctcctccacatttccttcaccctcctcctccagtg
acttctgttccacctcccctgcatcctccaggcctgccacctccaggtccaattccaggg
ttgttcccaccacctctggcaccaccaccagctctcctcatcccaaccttggatgggcag
ccagccagctacaacaacaggcagccacctccctttggctacaactctgcagattcaggt
ttcatcagctacccccccatctccacgtcccacacgccctgggtgaccacggtggacaag
ggcgcaagcagctccagcagcagccactgggagtactcgggctccagrcgggagagggag
cgggagcgcgagagggagcgggagagggagcgagaccgggaccgcgaccgcaccccgacc
accagtgaatacaacaatgacgacgagcggtaccgctactacagccgcgagcgcagctac
gacttcgagcgcgattaccggcgcagccgcgaccgcagccgcgagcgcgaggagcggcac
cgcgagcgccgccaccgcgacaaggacgacagcagcaaacacaaatcctcccgcaggaag
cagcacgagagcgaggagggggagagccaccggcgccacaagcacaaaaagaacaagcgg
agcaaggaggagaaggaggccagcgaggayggagctgcagagggtgaggagcaggacacc
aaggagtga
DBGET
integrated database retrieval system
