Malurus melanocephalus (red-backed fairy wren): 130575980
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Entry
130575980 CDS
T09178
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmea03016
]
130575980 (TRUB1)
Enzymes [BR:
mmea01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
130575980 (TRUB1)
Transfer RNA biogenesis [BR:
mmea03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
130575980 (TRUB1)
Prokaryotic type
130575980 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DMA
Motif
Other DBs
NCBI-GeneID:
130575980
NCBI-ProteinID:
XP_057226268
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MAGEAGGAALGRAADKLFSLSGLFAVCKPKGPTSAAVLNLLKERLLAEAGVQTSGNKRNQ
VLKIGHGGTLDSAATGVLVVGIGKGTKMLGTMLAGSKKYTAIGMLGKATDTLDATGKVTE
EKPYDQVTKRDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARPVRV
YSLSLQQFQPPLFTLGKDVECGGGFYVRSLVNDIGKELCTCATVQELTRTKQGPFTLEEH
ALHEDKWTIDEIARSLEHCTALLPGEPSRKKLKTEHPGETAVICEDK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggaggcgggcggtgctgctctcggccgcgcggccgacaagctcttctccctc
agcgggctgttcgccgtctgcaagcccaagggacccacctcggccgccgtgctcaacctg
ctcaaggagaggctgctggcagaagctggtgtgcaaacaagcgggaacaaaagaaatcag
gttttgaaaattggacatggaggtacattggacagtgcagccacaggagttctggtggtt
ggtattggaaaaggaacaaaaatgctgggaactatgctggcaggttccaagaagtacact
gccattggaatgctgggcaaggctactgatacattagatgctacaggaaaagtaactgaa
gaaaaaccttatgaccaggtcacaaaaagagatcttgaaaatgtgctacagaagttcacg
ggggacatcatgcaagttcctccactctattctgctttgaagaaggatggagaaaggctt
tcaactctgatgaagagaggggaagcagtggaagcaaagcctgctcggccagtaagagtg
tacagcctttctctccagcagttccagccaccactgttcacactgggtaaagatgttgaa
tgtggcggtggcttttatgtcaggagcctggtcaatgacattggcaaagagctctgtacc
tgtgccacagtgcaggagctgacccgcaccaagcaggggccgttcacgctggaggaacac
gccctgcacgaagacaaatggacaattgatgaaattgctcggtccttggagcactgcaca
gccctgctcccaggagagccatctcggaaaaaattgaagacagagcatcctggtgaaact
gctgtgatctgtgaggataagtga
DBGET
integrated database retrieval system
