KEGG   Malurus melanocephalus (red-backed fairy wren): 130576156
Entry
130576156         CDS       T09178                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
mmea  Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mmea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    130576156 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmea03400]
    130576156 (TDP1)
DNA repair and recombination proteins [BR:mmea03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     130576156 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 130576156
NCBI-ProteinID: XP_057226559
LinkDB
Position
Unknown
AA seq 613 aa
MLSLRNMLQEGAHGKWTVSSSDESAEENSDSEKPCTSSLSDAAPGRASGPQYPCSEARKA
AHKRKASPLKLTDKSLSTETPPAVKQRPSQEGSGWCLSSSDEEPEDLQKHAHKETVKEEK
YDAPKEHPLNLCKDDKLSENLKKEEHDETPSEAQDTWDLLNGGNPFRFFLTKVSGIGQSY
NSGALHIKDILSPLFGTLISSAQFNYCIDVGWLVRQYPLEFRKKPLLIVHGEKRESKAQL
IAEARPYENISFCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIAEDWHQKTQGIWL
SPLYPRLPEGASGSAGESATNFKSDLISYLSAYSSPALKEWIDLIQEHDLSETSVYLLGS
TPGRYQGNDKEKWGHLRLRKLLKEHALPIPAQESWPLVGQFSSIGSMGADGSKWLCSEFQ
ESLVAAASSVTPFLKCDVPIHLVYPTVNNVRQSLEGYPAGGSLPYSIQTAQKQLWLHSYF
HKWSAEVTGRTQAIPHIKTYMRLSPDFQKIAWFLVTSANLSKAAWGALEKNGSQLMIRSY
ELGVLFLPSAFGLDKGYFHVGGKKLPERKDSATYFPVPYDLPPERYGSKDQPWIWNIPYT
DAPDTHGNMWVPS
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgctttcccttaggaacatgcttcaggaaggtgcacacggtaaatggacagtatctagc
agtgatgaaagcgctgaggaaaattctgacagtgagaaaccatgcacatcttcactatcg
gatgctgcacctggtagagcaagtggaccacaatatccatgctctgaagctagaaaagct
gctcacaagaggaaagcttctcccctgaagctcactgataaaagtctttctacagaaaca
cctccagcagtaaaacagagaccaagccaagaaggctcaggctggtgtctttctagtagt
gatgaagagcctgaagatctgcaaaagcatgcccacaaagaaacagtgaaagaagaaaaa
tacgatgcacccaaagaacatcctctgaatctttgcaaagatgacaaactctcagagaat
ctgaaaaaagaggagcatgatgaaacacccagtgaagcccaagatacctgggatttattg
aatggagggaatcctttcaggttttttctcactaaagtcagcggaattggacagagctat
aattctggagcccttcacataaaagatattttgtctcctctttttggaactctcatatct
tctgcccagtttaactactgtatagatgtgggatggcttgtaagacagtacccsctggaa
ttcaggaagaaaccattgctgatagttcacggtgagaagagagaatccaaagctcaactg
attgcagaagcacggccttatgagaatattagcttctgtcaggctaaactggatattgca
tttggaactcaccatacgaaaatgatgttgttgttatatgaagaaggtcttcgagttgtg
atacatacatccaatcttattgctgaagattggcaccagaaaactcagggaatatggcta
agccctttatatccaaggctacctgagggagcatctggttctgctggtgaatctgcaaca
aattttaaatctgacctaataagttacttgtcagcttacagttctcctgcactcaaggaa
tggatagatctgattcaagaacatgatttatcagagacgagcgtgtatctgcttggttct
acccctggacgatatcaaggcaatgataaagaaaagtggggtcatcttaggctcagaaag
cttttgaaggaacatgctctgccaataccagcacaggaatcctggcctcttgttggacag
ttctcaagcattggttcaatgggagctgatgggtccaaatggctgtgctctgagttccag
gagagcctggtggctgcagccagcagtgtgacaccttttcttaaatgtgatgtcccaatt
catttggtttatcctactgtgaacaatgtgaggcaaagtctagaaggctatcctgctggt
ggctcacttccgtacagtatacagacagcacagaaacagctgtggttgcattcctatttt
cacaaatggtcagcagaagtcacaggtcgaactcaagctatacctcacattaagacctac
atgagactctctcctgacttccagaagattgcatggttcttagtaacaagtgccaatcta
tctaaagcagcttggggagctctggagaaaaatggcagccaactgatgatccgttcttat
gaacttggagttcttttcttgccttcagcatttggattggacaaaggttactttcatgta
ggagggaaaaagcttccagaaaggaaagattcagcracatattttcctgtaccttatgac
ctgccaccagaacggtatggaagcaaagatcagccatggatttggaatattccttacact
gatgcccctgatacacatggaaatatgtgggttccatcatga

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