Malurus melanocephalus (red-backed fairy wren): 130576225
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Entry
130576225 CDS
T09178
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mmea00536
]
130576225 (COL25A1)
Glycosaminoglycan binding proteins [BR:
mmea00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130576225 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
130576225
NCBI-ProteinID:
XP_057226695
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MGGGGKEIKAAAAEGCASTLGKSRGAAGQDGNGKPGGSGKPGLGKPGLGKPGCGGERCPR
RAGPVGSALAALLSALAAASCVYLGVRTSDLQARVAAIEGARGGFSAAAPLPPLPGFSLE
QLNAMMQEKVERLLAQKSYEHLAKIRVAREAAPECNCPPGPPGKRGKRGRRGETGPPGQP
GPQGPPGPKGEKGDQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPP
GPRGPPGDTGKDGPRGMPGLTGEPGKPGEQGLTGPQGPPGQKGSVGVPGVPGRDGQVGEP
GLPGJAGEKGEAGLKGDPGERGEKGEAGMNGLKGDTGEKGDPGSSAAGIKGEPGESGRPG
QKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGDRGEAGPVGKGERGEPGIPGP
KGKTGEPGSRGPKGSKGDTGERGDTGSAGPRGPPGQKGDQGATEIIDYNGNIHEALQRIA
TLTVTGPPGPPGPQGLQGSKGEPGSPGIPGADGEQGPKGSKGDTGDPGMPGEKGGIGLPG
LPGANGMKGEKGDVGLPGAQGPSMIGPPGPPGPHGPPGPMGPHGLPGPKGIDGPVGPHGP
AGPKGERGEKGTVGDPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDIGEKGEKGFRGIKGE
KGEPGQPGLDGLDAPCQLVQYFSFLPTLHAVPLFVVSHFQCKAMFS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggggggcggaggaaaggaaatcaaagctgccgcagccgaaggctgtgcgagcacgctg
gggaagagccgaggagccgcaggacaggatggcaacgggaagcccggcggcagcgggaag
cccggcctcgggaagcccggcctcgggaagcccggctgcggcggggagcgctgcccgcgg
cgggccgggcccgtgggctccgcgctggccgcgctcctctcggcgctggccgccgcctcc
tgcgtctacctgggggtgcggaccagcgacctccaggccagggtcgcggccatcgagggc
gcccgagggggtttctctgccgccgccccgctcccgccgctkcccggcttttccttggag
cagctcaacgcgatgatgcaggagaaagtggagcgacttctcgcccagaaatcttacgag
cacttggcaaaaatacgagtagcgagagaagcggctccagagtgcaactgcccaccaggt
cctccagggaaaagaggtaagcggggaagaagaggagagactggacctcctggtcagcct
ggtcctcaaggccctcctggtccaaaaggcgagaagggagatcaaggtgatcagggccct
cggatggtgtttcctaaaatcaatcatgggtttctctctgctgatcagcagctcattaaa
cgccgcctcattaagggggaccaaggacaagctgggccccctggacctccagggccacca
ggacccagaggtcccccgggagataccggcaaagatggycctcgtgggatgcctggctta
acgggtgagccaggaaaaccaggagaacaaggattgacaggacctcaggggcctccagga
caaaagggttctgtcggggtgcctggtgttccagggagagatggacaagtgggtgaacct
ggtttgcctggcwtagcaggagagaagggagaagcagggcttaagggtgaccctggagaa
agaggagaaaagggggaagctggcatgaatggactgaagggtgacacaggagaaaagggt
gaccctggctcttctgcagctggaattaagggtgaacccggtgagtctggacggcctgga
caaaagggtgaaccaggtcttcctgggcttcctggactccctggaataaagggtgaacca
ggtttcatcggtccacaaggagaacctggsttgccagggctaccaggaacaaagggtgac
agaggagaggcaggccctgttgggaagggtgagcgaggtgaacctggaatccctggacca
aaggggaaaacaggtgaacctggatctagaggccccaaagggtcaaagggtgacacaggt
gaaagaggtgacacaggatctgcaggtccacggggcccacctggacagaagggtgatcaa
ggtgcaacagagataattgattataatggcaatatccatgaagctctgcagaggattgcc
accctgactgtcacgggaccaccaggaccaccaggaccccaagggctgcaagggtcaaag
ggtgaaccaggatccccaggaattccaggagctgatggagagcagggtcctaagggctca
aaaggagacacaggtgatcctggaatgcctggagaaaagggaggaattgggctgcctggc
ctaccaggagccaatggcatgaaaggcgagaaaggtgacgttggtttgcctggtgcccag
ggtccttcaatgataggaccacctggaccaccagggccacatggtcctccaggccctatg
ggacctcatggactgcctggcccaaagggtatagatggcccagttggtccccatggccct
gcaggtcccaaaggagagagaggtgagaagggaactgtaggtgaccctggacccagagga
ccgtacggcttgcctggcaaagacggcgagcctggccttgatggtttccctggtccccga
ggagaaaagggtgatataggagaaaagggagaaaagggattccgtggaattaagggggaa
aaaggggagccaggccagcctggcctggatgggctggatgccccttgccaattggtacag
tatttctctttcctaccaaccctgcatgcagttcctttgtttgtagtcagccattttcaa
tgtaaagcaatgttttcctga
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