Malurus melanocephalus (red-backed fairy wren): 130576410
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Entry
130576410 CDS
T09178
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130576410 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmea01002
]
130576410 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mmea00536
]
130576410 (SHH)
Peptidases and inhibitors [BR:
mmea01002
]
Cysteine peptidases
Family C46: hedgehog family
130576410 (SHH)
Glycosaminoglycan binding proteins [BR:
mmea00536
]
Heparan sulfate / Heparin
Morphogens
130576410 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
Vint
Motif
Other DBs
NCBI-GeneID:
130576410
NCBI-ProteinID:
XP_057227056
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLVADTEGRLLYSD
FLTFLDREDGSHKLFYAIETRQPRARLLLTAAHLLFVAPQHNESQAGPAGGRALFASSVR
PGQRVFVLGEGGRRLLPAAVHRVSLREEASGAYAPLTAHGTILIDRVLASCYAVIEEHSW
AHWAFAPFRLLQAVLAALGPAAPGSAPGEPPAAGIHWYSRLLYRIGSWVLDSDSLHPLGM
VVTSS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggagacaccccaaa
aagctgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcagcgctgcaaggacaagctgaacgccctggcgatctcggtgatgaaccagtgg
cccggggtaaagctgcgggttaccgagggctgggacgaggacggccaccactccgaggag
tccctgcactacgagggccgcgccgtggacatcaccacctcggaccgggaccgcagcaag
tacggcatgctggcccgcctggccgtcgaggctggcttcgactgggtctactacgagtcc
aaggcgcacatccactgctccgtcaaagcagaaaactcggtggcggccaaatctgggggt
tgcttccctggctcggccacggtgcacctggagcaaggcgggaccaagctggtgaaggac
ctgaggccgggagacagggtgctggtggccgacacggaaggccgtctgctctacagcgac
ttcctcacgttcctggaccgggaggacggctcccacaagctcttctacgccatcgagacc
cggcagccccgggcccgsctgctgctgacggcggcgcacctgctgttcgtggctccgcag
cacaacgagtcgcaggcggggccggcgggcggccgggcgctgttcgccagcagcgtgagg
ccgggccagcgcgtcttcgtgctgggcgagggcgggcggcggctgctgccggccgccgtg
caccgcgtgtcgctgagggaggaggcgtcgggcgcctacgccccgctcacggctcacggc
accatcctcatcgaccgcgtgctggcctcctgctacgccgtcatcgaggagcacagctgg
gcgcactgggccttcgccccgttccgcctgctgcaggccgtgctggccgccctgggcccc
gccgcgccgggctcggccccgggagagcccccggccgccggcatccactggtactctcgg
ctcctctaccgcatcggcagctgggtgctcgacagtgactctctgcacccgctgggcatg
gtggtgacatccagctga
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