Malurus melanocephalus (red-backed fairy wren): 130576616
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Entry
130576616 CDS
T09178
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130576616 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mmea04990
]
130576616 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
mmea04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
130576616 (LDB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
PDZ_2
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
130576616
NCBI-ProteinID:
XP_057227392
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MAYSVNLNGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQMNQGDLVVAIDGVNTDSM
THLEAQNKIKSASHNLSLTLQKSKRPVPVSTTAPRIDSPRAVIPHQKVITNTAANTDFTE
RFNPNVLKDSALSTHKPIEVKGLGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQAQGGE
FAGTLPIKDPHVDSASPVYQAVLKTQSKPEDESEDWSRRSANLQSKSFRILAQMTGTEYM
QDPDEEALRRSRDKENVAAASENRPAGTTHAPQYVTSSIWHPPKSSTRDANTANAQPVAS
KGSVGLGAGTSQREASFGQTAPLASSSNQSTPVEHAPVAPSSAAPAPHASAPQPAAAAAQ
NTASPMTAPATTSVVQESFSSSFQRNTTQSYTPMPVSGSYSESPAPSAASKMRVVTTASI
KPSVYQPAPAPVHSYTPANTEPASRPPWVTDDSFSQKFAPGKSTTTVTKHILPRGVPVPS
PASISAYPSPVSPSSQPPALARGTVQRAERFPASSRTPLCGHCNSVIRGPFLVAMGRSWH
PEEFNCAYCKTSLADMCFVEEQNSVYCERCYEQFFAPTCARCHTKIMGEVMHALRQTWHT
SCFVCAACKKPFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDYPVEAGDKFIEALGHTWH
DTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggcttacagtgtgaatctgaatggacctggaccgtggggcttccgactgcaagggggc
aaggacttcaacatgcccttgaccatctccagaatcacccctggcagcaaggcagcacag
tcacagatgaaccagggggaccttgtcgtggccattgatggagttaacactgacagcatg
acccacctggaggcccagaacaagatcaaatcagccagccacaacctgagcctcactctt
cagaaatctaaacgcccagtgccagtttcaaccacagctcccagaattgactcgcccagg
gctgtaattccccatcagaaggtgataaccaacacygctgccaacacggacttcacggag
cgtttcaaccccaatgtcctgaaggactctgcyctgtctacacacaaacccattgaggtg
aagggccttggcggcaaggctaccataattcatgcccagtataacaccccgatcagcatg
tattcccaggatgctatcatggatgcaattgcaggccaggcacaagcccagggtggagaa
ttcgctggtaccctccctattaaggatcctcacgtagacagtgcctctcctgtgtatcag
gctgtgcttaaaactcagagcaagcctgaggatgagagcgaggactggagccgccgctct
gccaacctgcagtccaagtccttccgcatccttgcccagatgactggaactgagtacatg
caagatccagatgaagaagccctgaggaggtcaagagacaaggaaaacgttgcagcagca
tcagaaaacaggcctgcaggtaccacgcatgcaccacagtatgtgacctcgagtatttgg
catcctcctaaatcatccaccagggatgccaacactgccaatgctcagccagtggcctcc
aagggctctgtggggcttggagcaggtacaagccagagggaggccagttttggccagaca
gcccctcttgcttcatccagtaaccaaagtacccctgttgagcatgccccggtggctccc
agttctgctgctcctgcaccacatgcttcagcacctcagcctgctgctgctgctgctcaa
aacactgccagcccgatgacagcaccagccaccacctcagtagtgcaagagtctttctca
tcctccttccaaagaaacacaacccagtcgtatacaccaatgccagtttctggaagctac
agtgaaagtcctgctccttctgctgcttcaaaaatgagagttgttactactgccagcata
aagccctctgtctaccagccagcgccagcaccagttcattcctacacccctgccaacacg
gagcctgcgagtcgccctccctgggtaacagatgactccttttcccagaaatttgcacct
ggaaaatccaccaccactgtcacaaagcacatcctcccaaggggtgttccagtgccatct
cctgcctcaatttctgcttacccgtctccagtttcaccttcttcccagccccctgcatta
gcccggggaacagttcagagggcggagcgttttccagccagcagccgaaccccgctctgt
ggccactgtaacagcgtcattcgaggtcctttcctggtagccatgggtcgctcttggcac
ccagaagaattcaattgtgcttactgcaagacatccttggctgatatgtgctttgtggag
gagcagaatagcgtgtactgtgaacgctgctatgaacagttctttgcaccaacctgtgcc
agatgccacactaagattatgggggaagtgatgcatgccctaagacagacttggcacaca
agttgctttgtctgtgctgcttgtaagaagccgtttggaaatagcctgttccacatggaa
gayggggaaccttactgtgagaaagattatattgctttgttcagcacaaaatgtcatggc
tgtgattaycctgttgaagctggagacaaattcattgaagctcttggacacacttggcat
gacacctgcttcatttgtgctgtatgccatgtgaatttggaaggtcagccattctactcc
aagaaggataagccattgtgcaagaagcatgcccatgccatcaatgtttaa
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