Malurus melanocephalus (red-backed fairy wren): 130576672
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Entry
130576672 CDS
T09178
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
130576672 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mmea01009
]
130576672 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmea04515
]
130576672 (PCDH9)
Protein phosphatases and associated proteins [BR:
mmea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130576672 (PCDH9)
Cell adhesion molecules [BR:
mmea04515
]
Cadherins
Protocadherins
130576672 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
V_ATPase_I
RCR
EphA2_TM
DUF6249
7tm_3
Motif
Other DBs
NCBI-GeneID:
130576672
NCBI-ProteinID:
XP_057227498
LinkDB
All DBs
Position
Unknown
AA seq
1225 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSNTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEKEVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
TSYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQALNFGDMP
KYLWEIWVPDKPWVSQRRVTFHLPDGSQESCSDSGLGDHEPVGGGTLISHPLPLVQPQDE
FYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDNCWMPPSLGPYQ
QPKSPLSTFAPQKEWVKKDKLVNGHTLTRTWKEDSNRNQFSDRKQYGSGEGHFNTGNHMT
DIPLANLKSYKQAPGAVESPKEHQL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggccgctttgattgcctgtttgaggctggattct
gctatagctcaagaacttatttacactataagagaggagctgcctgaaaacgtacctata
gggaacataccaaaggacctgaacatttctcatatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtttctaaagcaggggatgcgcctctggtcaaagtgtccagt
aacacgggggaaatctttacaacgtccaacagaatagacagagaaaaactatgtgctgga
gcttcctatgcagaagaaaatgagtgtttttttgaacttgaagtggtgattctccccaat
gacttttttaggctgatcaaaataaaaatcattgtaaaggatactaatgacaatgcacct
atgtttccatcccctgtcatcaatatctccatcccagaaaacactctgatcaacagtcgc
tttccaatcccatcagcaacagatcctgacacaggtttcaatggtgtgcagcactatgag
ttgttaaacgggcagagtgtctttggactggatattgtagaaactccagaaggggagaaa
tggcctcagctgattgtgcagcagaacttggacagagagcaaaaggacacctatgtgatg
aaaatcaaagtggaggatggaggtactccccagaaatccagcacagctatcctgcaagtc
acagtaagtgatgtcaatgataacaggccggtatttaaagagagtcaagtagaggtccat
ataccagagaatgctcctgtaggcacctctgtaattcagcttcatgctacagatgctgat
attggaagcaatgcagaaatcagatacatttttggtgcccaagtcgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagttcagaggtccttagatcga
gaagagactgctattcacaaagtgacagtgctggctagtgatggtagctctacaccagcc
cgggcaactgtcaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacataataagtcccatcaatggcacagtgtacttatctgagaaagatcccatcaat
acaaagatcgccctaattacggtttcagataaggacactgatgtgaatggcaaagtgatc
tgtttcattgagaaagaggtccccttccacttgaaagcggtttacgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtg
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaagctggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccggcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggtcctaatgcctcctttttcgatctggatcgaaag
acaggagttttgacagcctccagagtttttgacagagaagagcaggagcgtttcattttc
actgttacagcccgagacaacggcacccctcctttgcagagtcaagcagctgtaattgtt
actgtgttggacgaaaatgacaacagtcccaaatttactcataatcatttccagtttttt
gtatcagagaacttaccaaagtatagcacagtgggggtgatcacagtgactgatgcagat
gccggggaaaataaagcagtgaccctttccatcctgaatgacaatgaaaactttgtgctg
gatccatactctggagttataaagtccaatgtttcttttgatcgagagcagcagagctct
tacacctttgatgttaaagcagtggatggagggcaacctcctcggtcttctacagcaaaa
gtaaccattaatgtgatggatgttaatgataacagtcccgttgtcatctacccaccttct
aatacttcttttaagctggtgccactctcagcaattccaggatcggtggtagccgaagtc
tttgctgtggatatagacactggcatgaacgctgagctgaagtacacgattgtaagcggc
aataacaagggtttgtttcggattgatccagtgacaggtaatatcactctggaagaaaaa
ccgactcctaatgatgtggggctgcatcgcttagttgtcaatataagtgatttgggttat
cccaaatccctgcatactcttgtgcttgtatttttatatgtaaatgatactgctggaaac
acctcttacatttatgacttgatacgtaggactatggaaacacctttggatcggaacata
ggggacagtagccaaccctaccaaaatgaggactatctcacgatcatgattgctattgtg
gcaggtgccatggttgtcatagtggtgatatttgtcacagttcttgttcgctgtcgacat
gcstccagattcaaagctgcccagaggagcaagcaaggtgctgagtggatgtctcccaat
caggagaacaagcaaaataagaaaaagaaaaggaagaaaaggaaatctccaaagagctct
cttttgaactttgtgaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aacgggacaataagccttccagcagagctggaggagcaaagtataggaagatttgattgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgatcttgccaagcattacaaa
tctgcctctccgcagtctgcttttcatctcaaacctgacactccagtttcagtgaaaaag
caccatgtgattcaggaactcccgttggacaacacctttgttggtggctgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacaggcactgaattttggagatatgccg
aagtacttgtgggagatttgggtacctgacaaaccatgggtgtcccagcgccgtgttaca
tttcacctccctgatggctcccaggaaagctgcagtgacagtggtctgggagaccacgag
ccagtgggtggtggaaccctgatctcacaccctctccctctggttcagccgcaggacgaa
ttctacgaccaggcttcaccggacaagaggactgaagctgatggcaattctgaccccaac
tcggatgggcctcttggtccacgaggattagctgaagctacggagatgtgtactcaagaa
tgcctggttttgggtcactcagacaactgttggatgcctcctagcttgggcccgtaccaa
cagccaaagtctcctctctccacctttgcacctcagaaagaatgggttaagaaggacaaa
ctagttaatggacacacattgaccaggacctggaaagaagatagcaacaggaaccagttc
agtgatcgaaagcagtatggttccggtgagggccatttcaacactggcaaccacatgact
gacattcctctggccaacttgaagtcttataaacaggccccgggagctgtggagagtcca
aaggagcaccagctataa
DBGET
integrated database retrieval system
