Malurus melanocephalus (red-backed fairy wren): 130576823
Help
Entry
130576823 CDS
T09178
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03030
DNA replication
mmea03410
Base excision repair
mmea03420
Nucleotide excision repair
mmea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130576823 (RFC1)
03410 Base excision repair
130576823 (RFC1)
03420 Nucleotide excision repair
130576823 (RFC1)
03430 Mismatch repair
130576823 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmea03032
]
130576823 (RFC1)
03400 DNA repair and recombination proteins [BR:
mmea03400
]
130576823 (RFC1)
DNA replication proteins [BR:
mmea03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130576823 (RFC1)
DNA repair and recombination proteins [BR:
mmea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130576823 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_14
AAA_22
Rad17
PTCB-BRCT
BRCT_2
AAA_5
AAA_16
AAA_30
AAA_18
RNA_helicase
RuvB_N
AAA_17
AAA_33
nSTAND3
AAA_7
TIP49
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
130576823
NCBI-ProteinID:
XP_057227734
LinkDB
All DBs
Position
Unknown
AA seq
1210 aa
AA seq
DB search
MLSSAALTRAWLPAHSGCFVCLSTLKRDDVMEAGHCALVCFQXAVHSAGSVADARAHEAA
GADIRKFFGVVPSGKRQECETVKKSEKIKNGEGHSSGKKREKETKVKNSPSEDDSKPKQX
KKKRRIIYDSDSEEEVQSLKKSKKTPEKKAATSKLGKVLKQDPVVYISDTDEEDDFVNKR
ISLKPKENGTSGVGCPGTNAVKKDDVKPQAKSKPLSPVKYTSTSALDYFGTKSVQRSEKK
LVASKRKEPSQSRDSTLDDEAIARQLQLEEDSELERQLHEDEEFARTLAMLDETPQKKKA
RRDTEGEQTVLDTTSSPNMAAGYKQSGRVTATDSTNAARNYSAKPQTKSEQSKGSHLSPQ
SSDGKTARGASDTTSPSKRGSRLGSLKQKEEIAQNSLSREKAASGKEEKTTPKKEKVSPK
KSESISPEDSEKKRNNYQAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVITGVLECIE
RDEAKSLIERYGGKVTGNVSKKTNYLVLGRDCGQAKREKASTLGTKIIDEDGLFDLIRTM
PGKKSKYELAAETEAKKMEARPKKSPQKAEAGKRNFSPCKREANNKKYKSTPEKEDTVSS
VKKETAAVRKLTDFKRQTAVEKESPKPKGNLVSEVNEDGSERLLWVDKYKPVSLKAVIGQ
QGEQSCANKLLRWLRNWHRNTLEDGQAKPNKSGSKDDGAGFKAALLSGPPGVGKTTTAAL
VCKELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGASSSVSGKHVLIMDEVDG
MAGNEDRGGIQELIGLIRHTKIPIICMCNDRNHPKMRSLVHYCLDLRFQRPRLEQIKGAM
MSIAFKEGLKIPPPAMQEIILAANQDIRQVLHNLNMWCAKDKSLTYDEAKTDASRAKKDI
KLGPFDVVRKVFATGEEAARMSLIDKSDLFFHDYSLAPLFVQENYVHVKPVAAGGNLKKH
LMLLSRAADSICDGDIVDKQIRSKQNWNLLPTQAIYASVLPGELMRGYMSQFPVFPSWLG
KFSSTGKHDRIIQELAMHMSLRTQTCKRTVNMEYLSYLRDALVQPLKDFGADGVQQAIAF
MDSYCLMKEDVENIMEISTWGGKPSPFSKLDSKVKAAFTRAYNKEAHLAPYSLSSVKASK
RQSGSAGTLDLSEDFSVEEIQSDEDEQDAVNSDAMIKQKKAKSSRVTKREKNEETTKKEG
KRKEKTRHLD
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgctttctagcgctgcgctgacccgggcctggctgcccgcccattctggatgcttcgtg
tgcctcagcaccctaaaaagggacgatgtcatggaagccgggcactgcgctctcgtctgt
ttccaascagcagtgcacagcgcgggctccgtggcagatgcccgagcacacgaggccgcg
ggagcggatatccggaaattctttggtgttgtgccttctggaaagmgacaagaatgtgag
actgtgaaaaagagtgaaaaaattaaaaatggtgaaggacactcaagtgggaagaaaagg
gaaaaggagactaaggtcaagaattcacccagtgaagatgattccaaaccaaagcagaya
aaaaagaagagaagaataatctatgattcagattcagaagaggaggtgcagtcactgaaa
aaatccaagaagacacctgagaaaaaagcagctacttcaaaacttggtaaagttctaaag
caggatcctgttgtttatatttcagacacagatgaagaagatgattttgtcaataaaagg
atttccctgaaaccgaaggagaatgggacatctggggttggttgcccaggaacaaatgct
gtgaaaaaagatgatgtaaaaccacaagctaaaagcaaacccctctctccagtgaaatac
acttccacctctgcacttgattactttgggacaaagagtgtccaacggtcagaaaagaaa
ctggtagcaagtaaaaggaaagagccttcacaaagcagagacagcaccctggatgatgag
gccattgctaggcaactacagcttgaagaagattcagagctggagagacagctgcatgaa
gatgaggaatttgctagaactctggccatgttggatgaaacaccacagaagaaaaaggct
cggagagatacagaaggagagcaaacagtactggacaccaccagcagccctaacatggca
gcaggatataagcagtcaggaagagtgacagcaacagattcaaccaatgcagccaggaat
tactcagcaaagccacagactaaatctgaacagtcaaaaggctctcatttatccccacaa
tcatctgatggtaaaacagcaagaggggcgtctgatacaacttcgccttcgaaacgtggc
tctaggcttgggtctctgaaacaaaaggaagagattgctcaaaattcactatcaagagaa
aaagcagcttcagggaaagaagagaagacaacaccaaagaaggagaaagtttctcccaag
aagtctgagtctataagtcctgaggactckgaaaagaagcgaaacaattaccaggcttac
cgaagcttccttaatcgtgagggtccaaaagcactgggttccaaagagatacctcagggt
gctgaaaactgcttggaagggctgacatttgtaattacgggtgttctggagtgtattgaa
agagatgaggccaagtctctgattgaacgttacgggggaaaagtaacgggcaatgtcagc
aagaagacaaattacctggtgttgggacgagactgcggccaggccaaacgtgagaaggca
tcaactttaggtacaaaaattattgatgaggatggtctgtttgatcttattcgaactatg
ccaggcaagaagtccaaatatgagctggcagctgaaacagaggcaaagaaaatggaagca
agacctaaaaagtcaccacagaaagctgaagctggaaaaaggaattttagcccctgcaaa
agggaagctaataataagaaatacaagtctactccagaaaaagaagatactgtgagttct
gtcaagaaggaaaccgctgctgttcgaaagcttacrgactttaaacgtcagactgcagtg
gagaaagaatccccaaaacctaaggggaacttggtttcagaggttaatgaagatggatca
gagagattgctrtgggtagataaatacaagcctgtatcgcttaaggcagttattggacag
cagggtgagcaaagctgcgccaataaactgcttcgatggctcagaaattggcacaggaat
accttggaagatggacaagcaaaacccaataaaagtggaagcaaagatgatggggcaggt
tttaaagcagcattactttctggtccacctggagttggtaaaactactacagctgctttg
gtttgtaaggaactggggtacagctacgtggagctgaatgccagtgacactcgcagcaag
aacagcctaaaggaagtagttgctgaatcacttaacaacaccagcatcaaagacttctgt
tctggcgcatcctcatcagttagcgggaaacatgtgttgatcatggatgaagtggatggk
atggcaggcaatgaagacagaggagggattcaggagttgattggtttgattcgacacaca
aagattcccatcatttgtatgtgcaatgatcgcaaccatcctaaaatgcggtccttagtc
cactactgtttggatcttcgttttcagagacctcgtctagagcagattaagggtgccatg
atgtccattgcatttaaagaaggtttaaaaattcccccacctgctatgcaagaaataatc
ctggcagcaaatcaggacatcagacaggttttacataatcttaatatgtggtgtgcaaaa
gataaatcattgacttatgatgaggctaaaacagatgccagcagagccaaaaaggacatc
aaactgggtccttttgatgttgtccggaaggttttcgctactggtgaggaggctgctcgt
atgtctcttatagacaaatcagatcttttcttccatgattattccctagcacctctcttt
gtccaagagaactatgtgcatgtcaaaccagttgctgctggaggtaatttaaaaaagcac
ttgatgctcttgagtagagcagctgatagtatatgtgatggtgatatagtggacaagcag
attcgtagcaagcagaactggaatcttcttccaacacaggctatttatgcaagcgttctg
ccaggagagctgatgagaggttacatgtcccagtttcctgtctttcccagttggctgggg
aaattttcatccacaggcaaacatgatcgtatcattcaagagctggcaatgcacatgagt
ctcagaacccagacatgcaagaggacagtgaatatggaatatttgtcatatttgcgggat
gcacttgtccagcccttgaaagactttggagcagatggtgtacaacaagctatagcattc
atggactcttactgcttgatgaaagaagatgttgaaaatatcatggaaataagcacatgg
ggaggcaaacctagtcctttctcaaaactggattccaaggtcaaagcagcttttacacga
gcctacaacaaagaggcacatctggctccatattcacttagttctgttaaggcatctaaa
aggcaatcgggatctgcagggaccttagacctgagtgaagacttcagtgtggaagagatc
caatctgatgaggatgagcaagatgctgttaacagtgatgcaatgattaagcaaaaaaag
gcgaagtcttccagggtgacaaaaagagagaaaaatgaagaaacaacaaaaaaagaaggg
aaaagaaaagagaaaaccagacatttagactaa
DBGET
integrated database retrieval system
