Malurus melanocephalus (red-backed fairy wren): 130577385
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Entry
130577385 CDS
T09178
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130577385 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmea03019
]
130577385 (CNOT10)
Messenger RNA biogenesis [BR:
mmea03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130577385 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
ARM_TT21_N
TPR_8
ARM_TT21
TPR_17
TPR_7
TPR_MalT
EMP24_GP25L
DUF6058
DUF948
Motif
Other DBs
NCBI-GeneID:
130577385
NCBI-ProteinID:
XP_057228664
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MAADKAADQGAEKHEGAGTSGITDQEKELSSSALQAFQAGNYDACLQHLNTLQDINKDDY
KITLNAAVAEFCKSNQTTTDNLRQTLNQLKNQVHSVVEEMDGLDDVENSMLYYNQAVILY
HLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTYQAEKALHLLAVLEKMISQ
GNNNSKNGKNESGNNTSKDSSNQKAESGALIEVAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTGECLRCMFWNNLG
CIHFAMGKHNLGIFYFKKALQENDNACAQLGTGSSDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQEPK
QENGSKTSNQLGGNTENSESSEACSNKSHEGDKFIAAPPSSPLKKQELENLRCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEYD
KARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKTLSDMRK
KPVFQPVHSIQPIQMPAFTTVQRK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacaaggctgcggatcaaggtgctgaaaaacatgaaggagcaggtacttct
gggattactgatcaggaaaaggaattgtcgagcagtgcattacaagcttttcaggctgga
aactaygatgcttgtttacaacacctaaatacccttcaagacataaacaaagatgactac
aaaataactttgaatgctgctgtkgcggagttctgtaaaagtaaccagactacaacagac
aacttgagacaaacccttaaccagctgaaaaatcaggttcactctgttgttgaagaaatg
gatggtttggatgatgttgagaacagtatgctgtactacaatcaagctgttatcctgtac
catctgcgtcagtacactgaagctatatcagttggggagaagctgtaccagttcatagag
ccttttgaagagaagtttgcccaggctgtgtgcttcttgcttgtagacttatacctgtta
acttaccaagctgagaaagccttgcatctgcttgctgttctggaaaaaatgatttcacag
ggcaacaataacagcaagaatggaaaaaatgagtcgggtaataataccagtaaagattcc
tcaaatcaaaaagctgaaagtggagctttaatagaagttgctaaatctaagatacatcag
tataaggtgagagcrtatatccagatgaagtcactaaaagcatgcaaaagggagatcaag
tctgttatgaatacagctgggaattcagctccttctctctttcttaagagcaattttgaa
tatttgagaggcaattaccgtaaagctgtcaaacttctaaacagtgcaaacattgctgaa
catccaggcttcatgaaaacaggtgaatgcttaaggtgtatgttctggaacaatcttggc
tgcatccactttgcaatgggaaagcacaatttaggaattttttactttaaaaaagccttg
caagaaaatgataatgcatgtgcacagctgggaacaggcagctcrgatccaggtaaaaaa
ttttcagggagacccatgtgtacgctactgactaacaaacggtatgagttgctctataac
tgtggaattcagctcttgcatattgggaggcccttagctgcctttgaatgcctgattgag
gcagtccaggtttatcattcaaaccctcgtctgtggctgagaatagcagaatgctgcatt
gctgccaataaagggacatcagaacaagagactaaaggtcttcccagcaaaaagggaatt
gtgcaatctatagtaggtcaaggctaccaccgtaagatagtcctagcatcccagtccata
cagaatgttgtttataatgatgggcagtcctcagcaatacctgtagccagcatggagttt
gcagcratttgtctaagaaatgccttgctgcttctgccagaagatcaacaggagccaaag
caagaaaatggatcaaaaactagtaatcagctggggggaaatacagaaaacagtgaaagc
agtgaagcatgcagcaataaaagtcatgaaggggataaattcattgcagctcctccttct
tcgcctttgaagaaacaggaattagagaatttaaggtgctcgatccttgcatgtagtgct
tatgtggctctggctttgggggataaccttatggcattgaatcatgcagacaaacttctg
cagcaaccaaagctgtcagggtctcttaagtttcttgggcatttgtatgcagcagaagct
ctcatctckctagacagaatatctgatgccatcactcacttgaaccccgagaatgtcact
gatgtttcccttgggatctcctcaaatgagcaggatcaaggctctgacaaaggagagaat
gaggcaatggaatcttctggcaagcagacaccacaatgttaccccagttcggtcacatct
gcacgaacaatgatgttrtttaaccttggaagtgcttactgcttgaggagtgaatatgac
aaagctcgaaagtgtcttcatcaggctgcttcactgatccaccccaaagagatccctccg
gaggccatcctgctggctgtgtatcttgaattacagaatggtaacacgcagctggcactg
cagatcatcaagaggaaccagctgctcccttctgtgaaaacactctctgacatgcggaaa
aagcctgttttccagccagtccactcaatccagcccattcagatgccagctttcaccact
gttcaaaggaagtga
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