Malurus melanocephalus (red-backed fairy wren): 130577439
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Entry
130577439 CDS
T09178
Symbol
SKIC3
Name
(RefSeq) SKI3 subunit of superkiller complex protein isoform X1
KO
K12600
superkiller protein 3
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130577439 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmea03019
]
130577439 (SKIC3)
Messenger RNA biogenesis [BR:
mmea03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
130577439 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_11
TPR_16
TPR_12
TPR_8
TPR_17
TPR_CcmH_CycH
TPR_9
ARM_TT21_C
ANAPC3
TPR_15
Fis1_TPR_C
BTAD
TPR_30
E_motif
TolB_N
TPR_5
TPR_20
Motif
Other DBs
NCBI-GeneID:
130577439
NCBI-ProteinID:
XP_057228775
LinkDB
All DBs
Position
Unknown
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKNARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKPNQIDVKGDLADVYQKLLELYESGDKQKWCDVCN
KLVELYHQEKKYLEVAETWQKLIRMKQEEGAEKAELHQLWKKMIQLLKDSTRNQDNKTGQ
LLLTAFEHVLDSADTVPGEDHQNLYKDFIQYLLKFPHEAARLEKACHDMMAXYPTVTYPL
EVLCLHFIHSGILSEKTLQCFSRLLEMDESSGPGIIGFGIKCLKEKKYKEAVKSLTEGLQ
KTNQCPAAWYYLAEAQMKIHEHRNAVLSCNQVLEALGTPEGPNLQWKNLALQLKAETLIK
IADADAAEEASKALQQIVDASSDPVVSALKGQAYLNKGLVDQASKISQELLLSHPDLAEA
HALEGFIHYSQKNYEQAEKSFLNAIERKAETAEYHQYLGLTYWFMSDETRKDKGKALTQF
LKAAKLDSYLGSAFYYLGNYYRDIAGDKSRARGCYKKAFELDETDEESGTAAVNLSVELG
DMDTALSILNEVTEKARPGTAKWAWLHRGLYYLRTGQPSQAVADLQAALRADPKDSNCWE
SLGEAYLNRGSYSTALKSFRKASELNPGLIYSIYRAAALEQILGKYENAIATYQEILKKT
EDYVPALKGLGECYLMLARSALDNYLDRKAVDYIEQALAYFTRAVKHRPDVSCLWKLLGD
TCTSVHVISPTKVNVQVLGSLLGKNTIKEILKKSELLTLGGRCYGRALKLMPLPSIWCDL
GINYYRQAEHLTAVGTDMNEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEQINIVAWTNLGVLYLATGNIEQAHEAFKIAQSLDPSYLLCWIGQA
LIAETVGSYDTMDLFRHTTELSMHTEGAKGYAHWVCSTLQDKANRNTELYLYNIVQMNAI
PAAHVVLSKYTERNPDDASAFTMFGFLNEYLHLKQQATYAYERAASLLKNSEDTEKYNTA
MQNYGRSLCALGRCDEAIEVYTSIPLTEFDGIVGLALAYFKKGLLEESFKAYEKALSVAE
SEKDKAHILTALAIIEYKRNKVDAAKTLLFKCSLKEPSTEGLKALCTLGLVKQDATLATA
ALKELLKLEKGDDGIYERCLIASAVYALQGRNVAIQREVSKAIHSYPGNPGLWSLLSRLV
PLYASKKAKGGAVAGNVAHTLDVNHRKEVLLNIAVNQLVAGCHMLEDKKNNPLKNIQKAI
HVYPDNPAAWAVLMAACHAENTVVCLNNTQPKRTGLEMTLVSTVSAKTGESNLPHNYVHT
LEDWCLCQAIASLEETGKLSEAEALCNKGLKSCPEHPALFLLLRQVQCKQLLQSHKELPD
NILEELRKTVMTSSSSVAAWQWLAKVYQSQRMMTGAEMCYRKSLQLASQQGSWNGKLSSL
LRLAMLALEICMANVSNEHWPSLVQEATTEALKLSPCPLAALLQALLQYNCKMGARETRR
MLERVIYQPANPETVVSVARWYLLQHLYAKDDCELIDMLIQNAKANGDTRTLELNEKMLA
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaggcagcattaaagaatgctagagacgcaataaggaataaa
gagtataaggaggccttaaaacattgcaaggcagtcttgaagcaagaaaaaaataactac
aatgcttgggtgttcattggcctggcagctgctgagttagagcagcctgatcaggccaaa
ggagcatataagaaggctattgaacttgaaccaaaccagttactggcatggcaggggcta
gcaaatttatatgagaaacccaaccaaatagatgtcaaaggagacttagcagatgtttac
caaaaactgttggaactctatgaaagtggtgacaagcagaaatggtgtgatgtttgtaac
aagcttgtggaactatatcatcaagaaaagaaatatttagaggtggctgaaacttggcag
aaactaatacggatgaaacaggaggaaggagcagaaaaggcagagcttcatcagctctgg
aagaagatgatccagttactgaaagacagtacaaggaaccaggataataagactgggcag
ttgcttttgactgcctttgagcatgtgctggactctgctgacactgttcctggtgaagac
caccaaaacctttacaaagattttatacagtacttgttaaaatttcctcatgaagcagct
aggttggaaaaggcctgtcatgatatgatggctttstaccctaccgtgacttatccgttg
gaagtactttgcttgcacttcattcattcaggtattttgtcagagaagaccctgcaatgt
ttctctaggcttttggagatggatgagagtagtggtccaggcatcattggttttggtata
aaatgcctcaaagaaaagaaatacaaggaggctgttaagagtcttactgaaggtttgcag
aagactaaccagtgtccagcagcatggtattatttagcagaggcacagatgaaaattcat
gaacacaggaacgctgtcctgtcctgcaatcaagttcttgaggctcttggaactcctgag
ggtcctaatcttcagtggaagaaccttgcccttcagttgaaagcrgagacgttgattaaa
atagccgatgctgatgctgcagaagaagccagtaaagcacttcagcagattgtagatgca
agcagtgatccagtggtttcagctctcaagggtcaggcttatctgaacaaaggcttagtg
gatcaggcttcaaagatttcacaggagcttctgctgtcacaccctgatctagctgaggcc
catgctctagagggtttcatccactattctcaaaagaattatgaacaggcagaaaaaagt
tttctaaatgctattgaaagaaaggctgaaactgcagagtatcatcaatacctggggctc
acatactggttcatgagtgatgagacaagaaaagacaaaggaaaagcactcactcagttc
ttgaaggctgccaaattggatagctacttgggaagtgccttttattatctaggtaactac
tacagagacattgctggagacaaaagtagagctcgtggttgctataaaaaggcttttgaa
ctggatgagacggatgaagaatctggaacggcagctgtaaacttaagtgtggagcttgga
gacatggacactgctctgtcaatcttgaatgaagtgactgaaaaagcaagacctggtaca
gcaaaatgggcctggcttcatcgtggactttattacctgagaactggtcagccgtctcaa
gcagtggctgatttgcaggcagctctcagggctgatccaaaggattccaactgctgggag
tctctaggagaggcttacttgaacagaggtagctactcaacagctctgaaatccttcagg
aaagcaagtgagctgaacccagggctcatttacagcatttacagagctgcagcacttgag
cagattctaggcaaatatgaaaatgctatagctacctatcaagaaattttaaagaagaca
gaagactatgtgcctgcactgaaaggacttggtgagtgttacctcatgctggcaagatca
gcccttgataactatttggataggaaggctgtggattacatagagcaggcccttgcatat
tttacaagggcagttaagcaccgtcctgatgtatcttgcctctggaaactgttaggagat
acttgtactagtgtgcatgttatttcaccaaccaaagtgaatgttcaagtactaggatcc
cttctgggtaaaaatacaatcaaagagatcttgaagaaaagtgagctgctcacactggga
ggaaggtgttatggcagagctttaaaactgatgcctttgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcagagcacctcacagcagtgggcactgacatgaatgag
atcagtgaactgctggagaagtctttgcagtgtctcaaaaaagctgtgagacttgatagc
aaaaatcatctctattggaatgcacttggtgtagttgcttcttgtagtgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaattaatattgtt
gcctggaccaacttgggggttttgtatcttgcaactggaaacattgagcaagcacatgaa
gccttcaagatagcccagtctctggacccttcttacttgttgtgttggattggtcaggct
cttattgcagagactgtaggcagctatgatactatggatctcttcaggcacacaactgaa
ctcagtatgcatactgagggagcaaaaggctatgcccactgggtatgctcaacgctgcag
gataaagccaacagaaacactgaactgtatctgtacaacattgttcaaatgaatgctata
ccagcagcccacgtggtcttgagcaaatatacagaaagaaatccagatgatgcatctgct
ttcacaatgtttggttttttgaatgagtatctgcatctaaaacagcaggcaacctatgcc
tatgagagggcagcttcactgctgaaaaactcagaggatactgagaaatacaatacagca
atgcagaactacggcaggtcactgtgtgctcttggtcggtgtgatgaggccattgaagtt
tacacatcaatacccctaacggagtttgatggtattgtggggctagcgttagcttacttc
aagaaaggactcttagaagaaagtttcaaagcctatgaaaaagccttgtctgttgctgag
tctgaaaaagataaagcacatatcctgactgctttggcgataatagaatataaacggaac
aaagtggatgctgcaaagacacttttgtttaaatgctcattaaaggaacctagtacagaa
ggtctgaaggctttgtgcacactaggattggtaaagcaggatgcaacacttgcaacagca
gccctgaaagaattactgaagcttgaaaaaggggatgatgggatttacgagaggtgcctt
attgcatctgctgtttatgcattacaaggtagaaatgtagcaatccagagggaagtctcc
aaagcaatacacagttaccctggtaatcctggtctttggtctcttctgtctcgactagtt
cccctttatgcatcaaaaaaggcaaaaggaggagctgtggcaggaaatgttgcacataca
cttgatgtaaaccatagaaaggaagtcctgctgaatattgcagttaatcagttggtagca
ggatgtcacatgttagaagataaaaaaaacaatcctctgaaaaatattcagaaggccatc
catgtctatccagataatcctgctgcttgggcagtgctaatggcagcctgtcatgctgaa
aacactgttgtctgtctaaacaacacacaaccaaaacgaacaggtctggagatgacactt
gtgtctacagtctcagccaaaactggagaaagtaaccttccacataattatgtccatact
cttgaagactggtgtctgtgtcaagctattgccagtttagaggagactggtaaactatca
gaagctgaagctctttgtaacaagggtttaaaaagctgccctgagcacccagctctcttt
ttgcttttgagacaagttcagtgtaagcagctgttgcagtctcacaaagaacttccagac
aacatcctggaggagcttcgcaagacagtcatgactagttcatcctcagttgcagcctgg
caatggctggcgaaagtctatcagtctcagagaatgatgactggagcagagatgtgttac
agaaagagtctgcagctggcatcacagcagggcagctggaacgggaagttatccagtctg
ctcaggctagctatgctcgcactggaaatctgcatggctaatgtctcaaatgagcactgg
ccatccttggttcaggaggcaacaactgaagctttgaaactttctccttgtcccctggca
gctctgcttcaagccctgctacagtataattgcaaaatgggagcaagggagactcgccga
atgttggagagagtcatttatcaaccagcgaatccagaaacwgtagtgtcagtggcacgc
tggtacctcctgcaacatctgtatgccaaagatgattgtgaattaatcgatatgcttata
caaaatgccaaagccaatggagatactagaactctggaactaaatgagaaaatgttagca
agtgcctaa
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integrated database retrieval system
