Malurus melanocephalus (red-backed fairy wren): 130577462
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Entry
130577462 CDS
T09178
Symbol
PCDH17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmea04515
]
130577462 (PCDH17)
Cell adhesion molecules [BR:
mmea04515
]
Cadherins
Protocadherins
130577462 (PCDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
130577462
NCBI-ProteinID:
XP_057228818
LinkDB
All DBs
Position
Unknown
AA seq
1205 aa
AA seq
DB search
MYLSICCFFFCWAPALSLKNLNYSVPEEQGAGTVIGNIGRDARLAAGAAGGGMLPAERGV
PGGGPGGGRGPKSTFRVLENSAPHLLDVDGESGLLYTKQRIDREALCRRSAKCQLSLEVF
ANDQEICMIKVEIQDLNDNAPSFPSDQVDMDISENAAPGTRFPLTSAHDPDAGDNGLRTY
LLTRDDYGLFSLDVKSRGDGTKFPELVIQKPLDREEQSHHTLVLTALDGGDPPRSGTVQI
NVRLIDSNDNSPIFEAASYVVELPENAPLGTAVIDLNATDADEGTNGEVLYSFSGYAPER
VRDLFSIDPQSGLIRVKGNLDYEESGLIEIDVQARDLGPNPIPAHCKVTVRLIDRNDNAP
TIGFVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGGPGAVPFTLEENY
DNFYTVVTDRPLDREVQDEYNVTIVARDGGNPPLNSTKSFSVRILDENDNPPRFSKNLYV
LQVPENNIPGEYLGSVLAQDPDLGQNGTVSYSILPGHVGDVSIYTYVSVNPTNGAIYALR
SFNYEQTKHFEFRVLAKDSGSPHRESNATVRVTVLDVNDNAPLIVLPALINDTAELQVPR
NAGVGYPVGTVRALDSDFGESGRLTYEIVEGNEEHLFEMDPTSGEIRTLHPYWEELSPVA
ELVVKVSDHGKPSLSAVAKLIVRALAGPLPEAGEPQVNGEQHRRPHWDLSLPLIVTLSTV
SIILLAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGGGSGGGGGGSGSGGGKGKKK
KISKNDIMLVPSEGEDSRGPLNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPA
SNNLTVPQGHVGCHTSFTGQGNNASEAPPSRMSIIQTDNFPAEPNYMGSRQQFVQSSSTF
KDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEQQGRGQ
RPIVGICGPARCEDGKFPEQEECVNCTDECRVLGHSDRCWMPQFPAASQAENADYRTNLF
VPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYLKAKRALSPLLQEVPS
ASSSPTKTCIEPCTSTKGPLDGCEVKSGALAEPSSQYLSTDSQYLSPSKQSKDASFIASD
QMARAFADVHSRVSRDSSEMDSVLEQLDRSARDLGRESVDAEEVVREIDKLLQDCRGSDP
VAIRK
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatttgttgcttcttcttctgctgggctcccgccctctcgctgaagaac
ctgaattactcggtgccagaagagcagggagcgggcacggtcatcgggaacatcggacgc
gatgcgcgsctggcggcaggcgcggcgggaggcgggatgctgcccgcggagcgtggcgtt
cccggtggcggccccggcggcggccgcggccccaagtccaccttccgggtgctggagaat
tcagccccgcacctcctggacgtggacggggagagcgggctgctctacaccaagcagcgc
attgaccgtgaggcgctgtgccggcgcagcgccaagtgccagctgtccctcgaggtgttc
gccaatgaccaggagatctgcatgatcaaagtggagattcaggacctgaacgacaatgca
ccgtcatttccctctgaccaagtggacatggacatctccgaaaatgctgcaccaggcacc
cgcttccccctcaccagtgcccacgacccagatgctggggacaacggtctgcgcacctac
ctgctcactcgtgatgactacggcctcttctccctcgatgtgaagtcccgtggtgatggc
acaaagtttccggagctggtcatccagaagccaytagaccgtgaggagcagagtcaccac
accctggtgctgacagcgctagatggcggtgacccaccgcgctcgggcacggtgcagatc
aatgtgcgcctcattgactccaatgacaacagccccatcttcgaggcagcctcctacgtg
gtagagctgccagagaatgcaccgctaggcacggctgtcatcgacctcaatgccactgat
gctgatgaaggtaccaacggagaggtactctactccttcagtggctacgcacctgagcgc
gtccgtgacctgttcagcattgacccacagagtggcctcatccgtgtcaagggcaacctg
gactatgaggagagcggcctcattgagattgatgtccaagctcgggacctggggcctaat
cccatccctgctcactgcaaggtcactgtccgcctcatcgaccgaaatgacaatgctccc
acaattggttttgtctccgttcgccagggagctctgagtgaggctgcgccaccaggcact
gtcattgccctggtgcgggtcactgaccgtgactcaggcaagaatgggcagctccagtgt
cgggtgctgggcggtggcggcgggcccggtgccgttcctttcaccctggaggagaactat
gacaacttctacactgtggtcactgaccgacccctggaccgtgaggtgcaggacgagtac
aatgtgaccatcgtggcacgcgatgggggcaatcccccactcaactccaccaagtcattt
tctgtccggatccttgacgagaacgacaatccaccccgcttcagcaagaatctttatgtg
ttacaggtgcctgagaacaacatccctggagagtacctgggctcagtcttggcccaggac
cctgacctgggccaaaatgggacggtgtcttactccattctgcctgggcatgtgggagat
gtctccatctayacctatgtgtctgtcaaccccacaaatggtgctatctacgccctgagg
agcttcaattacgagcagacaaagcactttgagttccgcgtgctggccaaagactckggt
tcaccccaccgtgaaagcaatgccacagtgcgtgtcacggtgctcgacgtcaatgataac
gcgcccctcatcgtcctgcctgccctcatcaatgacactgctgaactgcaggtgccacgc
aatgctggggtgggctaccccgtgggcaccgtccgtgccctggacagtgactttggggag
agtgggcgcctcacatatgagattgtggaaggcaatgaggagcacctctttgagatggac
cccactagcggtgagatacgcaccttgcacccctactgggaggagctcagccctgtggct
gaactggtggtaaaagtcagtgaccatggcaagcccagcctctccgcagtggccaagctc
atagtcagggccctggcggggcccctgcccgaggctggcgagccgcaggtgaacggcgag
cagcatcggcggccacactgggacttgtcgctgccgctgattgtgactttgagcactgtc
tccatcatcttgctggctgccatgatcactattgctgtgaagtgcaagcgagaaaacaag
gagatccgcacctataattgtcgcattgccgagtatagccaccctcagctgggaggaggg
ggaggcagtggcgggggaggaggaggcagtggcagtggagggggcaagggcaagaagaag
aagatcagcaagaatgacattatgctggtgcccagtgagggcgaggacagccggggtccc
ctcaatgtcatgaacgtggtgagcagcccatccctggccacctcacccatgtactttgac
taccagacccgcctgcccctcagctctcccaggtctgaggtgatgtacctgaagcccgcc
tccaacaacctgactgtaccccagggacatgtgggctgccacaccagcttcacagggcaa
gggaataacgccagcgaggctcccccgagccggatgtccataattcagacagacaatttt
cccgcagagcccaattacatgggcagcaggcagcagtttgttcaaagtagctccacattc
aaggatccagaaagagccagcttgagggacagcgggcatggggacagtgatcaggctgac
agtgaccaagacactaacaaaggctcctgctgtgacatgtctgttagggaggcactcaag
atgaaaactacttcaactaaaagccagccacttgaacaagaacagcaaggcagaggccaa
agacccattgttgggatctgtggaccagcccgctgtgaggatggaaaatttccagaacaa
gaagaatgtgttaactgcacagatgaatgcagagtgcttggtcattctgacaggtgttgg
atgccacagttccctgcagccagtcaggctgagaatgcagattatcgcacaaatctcttt
gtacccacagttgaagctaacgttgagactgagacatacgaaactgtgaatcccactggg
aaaaagactttttgtacatttgggaaagacaagagagagcacactattctcattgccaat
gttaaaccttacttaaaagccaaacgtgccctgagtcctctgcttcaggaggttccctca
gcatcgagcagcccaaccaagacatgcattgagccttgcacctcaacaaaaggaccactg
gatggttgtgaagtgaaatcaggagccttggctgaaccaagcagccagtacttgtcaact
gacagtcagtatctatcgcccagtaaacagtcaaaggacgcttccttcattgcatcagat
cagatggctagggcctttgcagacgtgcattcccgagtgagccgagactcgagcgagatg
gactctgttctggagcagttagaccgttccgcccgggatctaggcagggagtcggtggat
gccgaggaagttgtgagagaaatagacaagctcttgcaggactgtcggggaagcgaccct
gtggccatcagaaagtga
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